FAIRmat-NFDI/pynxtools issues and pull requests

#511 - Use new FAIRmat NOMAD Plugin corporate design for all pynxtools

Issue - State: open - Opened by mkuehbach about 1 month ago - 1 comment

#510 - Tutorial: Merging an appdef

Issue - State: open - Opened by domna over 1 year ago - 1 comment
Labels: documentation

#509 - Inconsistent bookkeeping spotted in Raman app

Issue - State: open - Opened by sanbrock about 1 month ago - 1 comment

#508 - Support appdef inheritance in dataconverter

Issue - State: closed - Opened by domna almost 2 years ago - 1 comment

#507 - Check IVTemp example to make sure it correctly complains on missing inherited User group

Issue - State: closed - Opened by sanbrock almost 2 years ago - 9 comments
Labels: bug

#506 - Improve functionality of Read-Nexus

Issue - State: open - Opened by sanbrock almost 2 years ago
Labels: documentation

#505 - dataconverter clarify handling for cases where a required group has first-order children which are all optional but group is required, list of silent and explicit rules, as a summary in the tech paper would be extremely useful

Issue - State: closed - Opened by sherjeelshabih about 2 years ago - 5 comments
Labels: dataconverter

#504 - Tutorial/Example: NXtransformations

Issue - State: open - Opened by domna over 1 year ago - 2 comments
Labels: documentation

#503 - IV_temp example error

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: bug

#501 - GUI bug: definitions column is not properly filled in NeXus App

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: bug, NOMAD

#499 - Reprocessing of NeXusDataConverter ELNs fails every second time with file access issue

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: bug, NOMAD

#498 - Check feasibility of removing field and attribute from Nomad.Nexus

Issue - State: open - Opened by lukaspie about 1 month ago

#497 - search_quantities from class properties

Issue - State: open - Opened by sanbrock about 1 month ago - 1 comment
Labels: NOMAD

#496 - Tutorial: How to interpret AppDefs

Issue - State: open - Opened by lukaspie about 1 month ago
Labels: documentation

#495 - Make beam path vizualization package (from NXbeam_device)

Issue - State: open - Opened by lukaspie about 1 month ago
Labels: enhancement, help wanted

#494 - GUI lane does not show the proper (sub)section

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: bug, NOMAD

#493 - readonly flag is not properly used by GUI

Issue - State: closed - Opened by sanbrock about 1 month ago
Labels: bug, NOMAD

#492 - documentation: pynxtools, plugins, examples, apps

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: documentation

#491 - clean up and ensure that examples work

Issue - State: open - Opened by sanbrock about 1 month ago
Labels: help wanted, NOMAD

#489 - Write tutorials/examples

Issue - State: open - Opened by domna over 1 year ago - 1 comment
Labels: documentation

#488 - pynxtools interface to be defined (also code restructuring and corresponding tests) and proper release management

Issue - State: open - Opened by lukaspie about 1 month ago
Labels: documentation, dataconverter, tests

#487 - Bump ruff version.

Pull Request - State: closed - Opened by RubelMozumder about 2 months ago - 2 comments

#486 - using readonly instead of user_editability; enabling injesting multip…

Pull Request - State: closed - Opened by sanbrock about 2 months ago

#485 - Ïnstantiate `results.material` only when there is some quantities ot be written there.

Issue - State: open - Opened by Pepe-Marquez about 2 months ago
Labels: bug, NOMAD

#484 - Connecting to base sections

Pull Request - State: closed - Opened by sanbrock 2 months ago

#483 - update spm.

Pull Request - State: closed - Opened by RubelMozumder 2 months ago

#482 - Test which plugins are installable or installed

Issue - State: open - Opened by lukaspie 2 months ago
Labels: tests

#481 - Integrate pynxtools igor

Pull Request - State: closed - Opened by lukaspie 2 months ago - 1 comment

#480 - activate ramman.

Pull Request - State: closed - Opened by RubelMozumder 2 months ago

#479 - Use spellchecker in docs deployment

Issue - State: open - Opened by lukaspie 2 months ago
Labels: documentation, CI/CD

#478 - punctual typo fixes and corrections in docs

Pull Request - State: closed - Opened by lukaspie 2 months ago - 2 comments

#477 - Add tests for multi format reader

Issue - State: open - Opened by lukaspie 2 months ago
Labels: dataconverter, tests

#476 - allow the use of wildcard definitions for the reader tests

Pull Request - State: closed - Opened by rettigl 2 months ago - 4 comments

#475 - raise lower plugin versions

Pull Request - State: closed - Opened by lukaspie 2 months ago

#474 - initial skeleton for NeXus App

Pull Request - State: closed - Opened by sanbrock 2 months ago

#473 - Update NeXus definitions

Pull Request - State: closed - Opened by lukaspie 3 months ago

#472 - Optional link in multireader

Pull Request - State: open - Opened by lukaspie 3 months ago - 4 comments

#471 - Constrain plugin versions in extra install

Pull Request - State: closed - Opened by lukaspie 3 months ago

#470 - Small updates to multi reader

Pull Request - State: closed - Opened by lukaspie 3 months ago - 1 comment

#469 - [Bug]: Validation Error if @URL is required for the NeXus definition

Issue - State: open - Opened by RonHildebrandt 3 months ago - 1 comment
Labels: bug

#468 - Allow kwargs in ReaderTest

Pull Request - State: closed - Opened by lukaspie 3 months ago

#467 - Allow `**kwargs* in ReaderTest

Issue - State: closed - Opened by lukaspie 3 months ago
Labels: bug, CI/CD

#466 - Entry type2

Pull Request - State: closed - Opened by sanbrock 3 months ago

#465 - Entry type

Pull Request - State: closed - Opened by sanbrock 3 months ago

#464 - fix for entry_type assignment

Pull Request - State: closed - Opened by sanbrock 3 months ago

#463 - Use a different way of testing the plugins

Pull Request - State: closed - Opened by lukaspie 3 months ago - 1 comment

#462 - update citation

Pull Request - State: closed - Opened by lukaspie 3 months ago

#461 - fix case if the handle function inside get_data is ill defined

Pull Request - State: closed - Opened by RonHildebrandt 3 months ago - 4 comments

#460 - Fix metainfo tests

Pull Request - State: closed - Opened by lukaspie 3 months ago

#459 - Move nomad examples to plugin extend

Pull Request - State: closed - Opened by RubelMozumder 3 months ago - 2 comments

#458 - update CITATION

Pull Request - State: closed - Opened by lukaspie 3 months ago

#457 - Fix type hints

Pull Request - State: closed - Opened by lukaspie 3 months ago

#456 - Update CITATION.cff

Pull Request - State: closed - Opened by lukaspie 3 months ago

#455 - carefull name generation for new BasicELN archive and population NXroot

Pull Request - State: closed - Opened by sanbrock 3 months ago - 2 comments

#454 - bump ruff to >v0.6

Pull Request - State: closed - Opened by lukaspie 4 months ago - 3 comments

#453 - Avoid name conflict with BaseSection classes

Pull Request - State: closed - Opened by lukaspie 4 months ago

#452 - Add notes to How-To to use dev install for verify_nexus

Pull Request - State: closed - Opened by RonHildebrandt 4 months ago

#451 - replace BasicEln

Pull Request - State: closed - Opened by sanbrock 4 months ago

#450 - fix link in docs

Pull Request - State: closed - Opened by lukaspie 4 months ago - 4 comments

#449 - Simple modification.

Pull Request - State: open - Opened by RubelMozumder 4 months ago

#448 - Move NOMAD examples to plugin

Pull Request - State: closed - Opened by lukaspie 4 months ago - 8 comments

#447 - Adds a logic to match NX class at the same level when no base_section…

Pull Request - State: open - Opened by sherjeelshabih 4 months ago

#446 - Package title in citation

Pull Request - State: closed - Opened by lukaspie 4 months ago

#445 - Add doi url

Pull Request - State: closed - Opened by RubelMozumder 4 months ago

#444 - Add DOI and URL.

Pull Request - State: closed - Opened by RubelMozumder 4 months ago

#443 - Retry to publish

Pull Request - State: closed - Opened by RubelMozumder 4 months ago - 1 comment

#442 - Peseudo chaange.

Pull Request - State: closed - Opened by RubelMozumder 4 months ago

#441 - NIAC resolution for uppercases

Issue - State: open - Opened by lukaspie 4 months ago
Labels: help wanted

#440 - [Bug]: Revisit np type

Issue - State: open - Opened by RubelMozumder 4 months ago
Labels: bug

#439 - init commit for citation.

Pull Request - State: closed - Opened by RubelMozumder 5 months ago - 6 comments

#438 - Testing

Pull Request - State: closed - Opened by TLCFEM 5 months ago

#437 - Use quantity name directly

Pull Request - State: closed - Opened by TLCFEM 5 months ago - 10 comments

#436 - [Bug]: read_nexus fails on illegal AXISNAME_indices

Issue - State: open - Opened by rettigl 5 months ago
Labels: bug

#435 - Extend nx type

Pull Request - State: closed - Opened by RubelMozumder 5 months ago - 1 comment

#434 - Enumerations not in appdef are not checked

Issue - State: open - Opened by rettigl 5 months ago - 1 comment

#433 - Nexus conversion without Application Definition

Issue - State: closed - Opened by rettigl 5 months ago - 1 comment

#431 - Regenerate requirements.txt file.

Pull Request - State: closed - Opened by RubelMozumder 5 months ago

#429 - [Bug]: Invalid groups with linked children don't get detected as undocumented

Issue - State: open - Opened by rettigl 5 months ago - 6 comments
Labels: bug

#428 - Enhanced binary strings decoding

Pull Request - State: open - Opened by lukaspie 5 months ago

#427 - Map to basesections reorganized 2

Pull Request - State: closed - Opened by RubelMozumder 5 months ago

#426 - Functionalities for implementing EM v3 and APM v3 in pynxtools-PLUGINS

Pull Request - State: closed - Opened by mkuehbach 5 months ago

#425 - Use NXidentifier branch in nexus-defs

Pull Request - State: closed - Opened by lukaspie 5 months ago

#424 - NOMAD tests in testing framework

Issue - State: closed - Opened by lukaspie 5 months ago - 1 comment
Labels: good first issue

#423 - Links create sometimes undocumented attributes

Issue - State: open - Opened by rettigl 5 months ago

#422 - Namefitted attributes are not recognized

Issue - State: open - Opened by rettigl 5 months ago - 1 comment

#421 - Auto-convert binary arrays to strings in read_nexus

Pull Request - State: open - Opened by rettigl 5 months ago - 5 comments

#420 - [Bug]: read_nexus cannot process files with fixed-length strings

Issue - State: open - Opened by rettigl 5 months ago
Labels: bug

#419 - New attempt: map to NOMAD basesections

Pull Request - State: closed - Opened by lukaspie 5 months ago - 1 comment

#418 - To allow entry_type would be written or not.

Pull Request - State: open - Opened by RubelMozumder 5 months ago

#417 - Map to NOMAD basesections

Pull Request - State: closed - Opened by lukaspie 5 months ago - 1 comment

#416 - recommiting PR402, as rebasing failed

Pull Request - State: closed - Opened by RonHildebrandt 5 months ago - 1 comment

#415 - Add NX docstring as attribute

Pull Request - State: open - Opened by lukaspie 5 months ago - 4 comments

#414 - Docs: pynxtools as a NOMAD plugin

Issue - State: open - Opened by lukaspie 6 months ago
Labels: documentation

#413 - Remove unneeded doc generation script

Pull Request - State: closed - Opened by lukaspie 6 months ago - 2 comments

#412 - Move all READMEs to docs, overhaul doc structure

Pull Request - State: closed - Opened by lukaspie 6 months ago

#411 - Add docs for CLI API, tool to report installed readers

Pull Request - State: closed - Opened by lukaspie 6 months ago

#410 - Declutter kwargs in convert_cli

Issue - State: open - Opened by lukaspie 6 months ago - 1 comment
Labels: dataconverter

#409 - Skip overwritting entry type

Pull Request - State: closed - Opened by RubelMozumder 6 months ago - 2 comments

#408 - Check axes of dataset is list or str.

Pull Request - State: closed - Opened by RubelMozumder 6 months ago

#407 - Fix indentation in multiformat reader docs

Pull Request - State: closed - Opened by lukaspie 6 months ago

GitHub / FAIRmat-NFDI/pynxtools issues and pull requests