Ecosyste.ms: Issues

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GitHub / EcoExtreML/STEMMUS_SCOPE_Processing issues and pull requests

#120 - prepare for release 0.5

Pull Request - State: closed - Opened by SarahAlidoost about 1 month ago - 1 comment

#119 - Fix failing markdown link checker: Switching to new link checker action

Issue - State: closed - Opened by SarahAlidoost about 2 months ago - 1 comment

#118 - Prepare for release

Pull Request - State: closed - Opened by SarahAlidoost 2 months ago - 2 comments

#117 - Updated Dockerfile

Pull Request - State: closed - Opened by BSchilperoort 2 months ago - 1 comment

#116 - Add/Edit variables to BMI

Pull Request - State: closed - Opened by MostafaGomaa93 3 months ago - 2 comments

#114 - the EVAP variable is always zero in BMI

Issue - State: closed - Opened by MostafaGomaa93 3 months ago - 3 comments

#112 - Update README.md

Pull Request - State: open - Opened by yijianzeng 3 months ago - 1 comment

#111 - Model is not finalizing

Issue - State: closed - Opened by MostafaGomaa93 3 months ago - 8 comments

#110 - matlab runtime error

Issue - State: closed - Opened by lmn369 3 months ago - 11 comments

#109 - Add a github pull request template

Issue - State: closed - Opened by SarahAlidoost 5 months ago
Labels: documentation

#108 - Release 0.5.0

Issue - State: closed - Opened by SarahAlidoost 5 months ago - 1 comment

#107 - Add Docker publish action

Issue - State: closed - Opened by BSchilperoort 6 months ago - 3 comments
Labels: documentation, enhancement

#106 - Move BMI variable reference to yaml file(s)

Issue - State: open - Opened by BSchilperoort 6 months ago
Labels: enhancement

#105 - Add a documentation about config file in section `Run the model`

Issue - State: closed - Opened by SarahAlidoost 6 months ago
Labels: documentation

#103 - Copy csv file to input folder

Issue - State: open - Opened by SarahAlidoost 6 months ago - 1 comment

#101 - Implement groundwater coupling changes in BMI

Pull Request - State: closed - Opened by BSchilperoort 11 months ago - 5 comments

#99 - Modflow stemmus_scope coupling with BMI

Issue - State: open - Opened by SarahAlidoost 12 months ago

#98 - Problems with running Model with different datasets in Linux668

Issue - State: closed - Opened by prajzwal08 12 months ago - 9 comments

#97 - Release0.4

Pull Request - State: closed - Opened by SarahAlidoost about 1 year ago - 1 comment

#96 - Make a release

Issue - State: closed - Opened by SarahAlidoost about 1 year ago

#95 - Setting chunks auto in open_mfdataset

Pull Request - State: closed - Opened by SarahAlidoost about 1 year ago - 2 comments

#94 - Model.setup() with global data fails due to high memory usage on own system and CRIB

Issue - State: closed - Opened by SarahAlidoost about 1 year ago - 1 comment
Labels: bug

#93 - Add an example notebook to run the model with global data

Pull Request - State: closed - Opened by SarahAlidoost about 1 year ago - 3 comments

#92 - GitHub docker test

Pull Request - State: closed - Opened by BSchilperoort about 1 year ago - 3 comments

#91 - Debugging GH actions

Pull Request - State: closed - Opened by BSchilperoort about 1 year ago - 2 comments

#90 - Content of CONTRIBUTING.md is not suitable

Issue - State: closed - Opened by geek-yang about 1 year ago
Labels: documentation

#89 - Implementation of the STEMMUS_SCOPE BMI, +docs +gprc4bmi

Pull Request - State: closed - Opened by BSchilperoort about 1 year ago - 4 comments

#88 - Move wind speed masking from stemmus_scope to pystemmusscope

Pull Request - State: closed - Opened by SarahAlidoost over 1 year ago - 1 comment

#86 - Bump version to 0.3.0

Pull Request - State: closed - Opened by BSchilperoort over 1 year ago - 1 comment

#85 - Skip data preparation in `model.setup` if input data exist

Issue - State: open - Opened by SarahAlidoost over 1 year ago - 2 comments
Labels: nice to have

#84 - Make landcover output dynamic

Pull Request - State: closed - Opened by BSchilperoort over 1 year ago - 1 comment

#83 - valid_eth_canopy_height_files not found

Issue - State: open - Opened by QianqianHan96 over 1 year ago - 4 comments
Labels: documentation

#82 - Add notebook to efficiently compare model branches

Pull Request - State: closed - Opened by BSchilperoort over 1 year ago - 3 comments

#81 - pip install issue on crib

Issue - State: closed - Opened by geek-yang over 1 year ago
Labels: documentation

#80 - Extend the table for regional classes

Pull Request - State: closed - Opened by SarahAlidoost over 1 year ago - 1 comment

#79 - Add an example of selecting lat/lon to the netebook

Issue - State: closed - Opened by SarahAlidoost almost 2 years ago
Labels: documentation

#78 - Explaining datasets in the documentation

Issue - State: closed - Opened by SarahAlidoost almost 2 years ago
Labels: documentation

#77 - Release 0.2.1

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 2 comments

#76 - Add time units and calendar when writing netcdf

Pull Request - State: closed - Opened by SarahAlidoost almost 2 years ago - 1 comment

#75 - Explain using hatch for development in contributing guide

Issue - State: closed - Opened by SarahAlidoost almost 2 years ago
Labels: documentation

#74 - The netCDF files can't be read by modelevaluation website.

Issue - State: closed - Opened by Yunfei-Wang1993 almost 2 years ago - 10 comments

#73 - Add support for land cover data

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 2 comments

#72 - PyStemmusScope_Octave Runing return an error

Issue - State: closed - Opened by yijianzeng almost 2 years ago - 2 comments

#71 - Add checks for missing data

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 3 comments

#70 - Add PyStemmusScope to zenodo

Issue - State: open - Opened by BSchilperoort almost 2 years ago
Labels: documentation

#69 - Add LAI to global data selection

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 4 comments

#68 - Move to hatch based setup. Lint with Ruff. Add mypy.

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 1 comment

#67 - Add more info about versions of stemmus_scope to the docs

Issue - State: closed - Opened by SarahAlidoost almost 2 years ago
Labels: documentation

#66 - Release 0.2.0. Update changelog

Pull Request - State: closed - Opened by BSchilperoort almost 2 years ago - 1 comment

#65 - The link seems need to be updated

Issue - State: closed - Opened by yijianzeng almost 2 years ago - 1 comment
Labels: documentation

#64 - Update to docs, include notebook w/ source link

Pull Request - State: closed - Opened by BSchilperoort about 2 years ago - 5 comments

#63 - Add support to load global forcing data

Pull Request - State: closed - Opened by BSchilperoort about 2 years ago - 4 comments

#62 - Run model using octave on crib

Issue - State: closed - Opened by SarahAlidoost about 2 years ago - 1 comment

#61 - Add tags to the notebook links in the documentation

Issue - State: closed - Opened by SarahAlidoost about 2 years ago

#60 - Bug in hdf5storage has been fixed

Issue - State: open - Opened by BSchilperoort about 2 years ago
Labels: enhancement

#59 - Use pydantic for config file

Issue - State: open - Opened by SarahAlidoost about 2 years ago
Labels: enhancement

#58 - "InitialCondition" soil data validation

Issue - State: open - Opened by BSchilperoort about 2 years ago

#57 - Fully validating the (user-generated) config file

Issue - State: open - Opened by BSchilperoort about 2 years ago - 1 comment

#56 - Fix version syntax in the environment file

Pull Request - State: closed - Opened by SarahAlidoost about 2 years ago - 1 comment

#55 - Support for other models

Issue - State: open - Opened by SarahAlidoost about 2 years ago
Labels: nice to have

#54 - Add a pypi badge

Pull Request - State: closed - Opened by BSchilperoort about 2 years ago - 2 comments

#53 - Created Python publish action

Pull Request - State: closed - Opened by BSchilperoort about 2 years ago - 1 comment

#52 - Make a release and publish on pypi

Issue - State: closed - Opened by SarahAlidoost about 2 years ago - 1 comment

#51 - Fixed conda env to py<3.11. Added Python 3.10 to CI

Pull Request - State: closed - Opened by BSchilperoort about 2 years ago - 2 comments

#50 - Select location and time range

Pull Request - State: closed - Opened by geek-yang over 2 years ago - 4 comments

#49 - Pin Python<3.11 in conda's `environment.yml`

Pull Request - State: closed - Opened by BSchilperoort over 2 years ago - 3 comments

#48 - Avoid locale issues in generating forcing .mat files

Pull Request - State: closed - Opened by BSchilperoort over 2 years ago - 2 comments

#47 - Error configuring mamba/conda environment using `environment.yml`

Issue - State: closed - Opened by geek-yang over 2 years ago - 2 comments
Labels: bug

#46 - Octave, subprocess and oct2py

Issue - State: open - Opened by SarahAlidoost over 2 years ago - 3 comments

#45 - Add octave and matlab to run module

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 8 comments

#44 - Make the argument exe_file optional

Issue - State: closed - Opened by SarahAlidoost over 2 years ago

#43 - The failed actions Build for 3.8, windows-latest xarray dependencies

Issue - State: closed - Opened by SarahAlidoost over 2 years ago - 2 comments

#42 - Refactor save to netcdf: change config.model to config_file

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 3 comments

#40 - Fix tiny bugs in `run_model_in_notebook.ipynb`

Pull Request - State: closed - Opened by geek-yang over 2 years ago - 2 comments

#39 - Permission denied in copying input data when running notebooks on WSL

Issue - State: closed - Opened by SarahAlidoost over 2 years ago - 2 comments

#38 - Error using load in Matlab

Issue - State: closed - Opened by SarahAlidoost over 2 years ago - 2 comments
Labels: enhancement

#37 - Fix the link of contributing guides

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 1 comment

#36 - Added WSL instructions to readme

Pull Request - State: closed - Opened by BSchilperoort over 2 years ago - 1 comment

#35 - Unclear error message on incorrect `SoilPropertyPath`

Issue - State: open - Opened by BSchilperoort over 2 years ago

#34 - `~` ($HOME) in path not supported by PyStemmusScope

Issue - State: open - Opened by BSchilperoort over 2 years ago - 1 comment

#33 - README's matlab runtime installation instructions

Issue - State: closed - Opened by BSchilperoort over 2 years ago

#32 - Remove matlab scripts and revise documentations

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 1 comment

#31 - Matlab R2021a incompatible with Python 3.9

Issue - State: closed - Opened by SarahAlidoost over 2 years ago - 2 comments

#30 - Added numpy, pandas, xarray to intersphinx mapping

Pull Request - State: closed - Opened by BSchilperoort over 2 years ago - 1 comment

#28 - Revise readme

Issue - State: closed - Opened by SarahAlidoost over 2 years ago

#27 - STEMMUS_SCOPE executable file incompatible with Windows

Issue - State: closed - Opened by BSchilperoort over 2 years ago - 3 comments

#26 - Setting up readthedocs

Pull Request - State: closed - Opened by BSchilperoort over 2 years ago - 1 comment

#25 - Move set matlab log dir to subprocess.run command

Issue - State: closed - Opened by SarahAlidoost over 2 years ago

#24 - explore MATLAB for Continuous Integration

Issue - State: open - Opened by SarahAlidoost over 2 years ago

#23 - Write csv files in netcdf fromat

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 4 comments

#22 - path.resolve() does not resolve the path on windows with python 3.8 and 3.9

Issue - State: closed - Opened by SarahAlidoost over 2 years ago - 1 comment

#21 - Add model class

Pull Request - State: closed - Opened by SarahAlidoost over 2 years ago - 3 comments