Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ESHackathon/CiteSource issues and pull requests

#224 - change read citation argument to include all fields

Pull Request - State: open - Opened by TNRiley about 2 months ago

#223 - Tables not accurate when users deduplicates items manually

Issue - State: open - Opened by TNRiley 2 months ago
Labels: Bug, Output, Internal

#222 - Tables creation reliant on labels (shiny)

Issue - State: open - Opened by TNRiley 2 months ago
Labels: Output, Internal, Shiny Application

#220 - Upload table - add autofill option for easy column completion

Issue - State: open - Opened by TNRiley 3 months ago
Labels: Enhancement, Shiny Application

#219 - Update dev from main (after changes to deploy actions)

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#218 - Fix doc warnings and missing package in action

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#217 - Try to resolve textshape install failure

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#216 - Set GH tokens

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#215 - Fix both deploy actions

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#214 - Add manual deploy

Pull Request - State: closed - Opened by LukasWallrich 3 months ago

#213 - deploy failure dev shiny

Issue - State: closed - Opened by TNRiley 3 months ago - 9 comments
Labels: Bug, Shiny Application

#212 - Reconsider import as too many RIS versions fail

Issue - State: open - Opened by LukasWallrich 3 months ago - 3 comments
Labels: Enhancement

#211 - Auto-deduplication message shows wrong # of unique records

Issue - State: closed - Opened by TNRiley 4 months ago - 1 comment
Labels: Bug

#210 - updating dev

Pull Request - State: closed - Opened by TNRiley 4 months ago

#209 - Fix deploy conditions

Pull Request - State: closed - Opened by LukasWallrich 5 months ago

#207 - Start working with branches

Issue - State: open - Opened by LukasWallrich 5 months ago - 1 comment

#206 - Change deploy - main to production, dev to _latest

Pull Request - State: closed - Opened by LukasWallrich 5 months ago

#204 - Shiny - filtering issues for (2) plots/tables that rely primarily on n_unique

Issue - State: open - Opened by TNRiley 5 months ago
Labels: Bug, Shiny Application

#202 - calculate_initial_records includes rows not labeled search

Issue - State: closed - Opened by TNRiley 6 months ago - 1 comment
Labels: Bug, visualisation

#201 - error in `synthesisr_read_refs()

Issue - State: closed - Opened by rootsandberries 6 months ago - 6 comments

#200 - Rewrite examples to show real use

Issue - State: open - Opened by LukasWallrich 7 months ago - 10 comments
Labels: Documentation

#199 - Should dedup_citations always return list?

Issue - State: open - Opened by LukasWallrich 7 months ago - 3 comments
Labels: Question, Internal

#198 - cite_label and cite_string not being applied in shiny

Issue - State: closed - Opened by TNRiley 7 months ago - 8 comments
Labels: Bug, Shiny Application

#197 - Add arguments to record_level_table for easy filtering of cite_label and cite_string

Issue - State: open - Opened by TNRiley 7 months ago
Labels: Enhancement, Internal

#196 - Rewrite table scripts to rely soley on deduplicated data (for re-imported data)

Issue - State: closed - Opened by TNRiley 7 months ago - 9 comments
Labels: Enhancement, Output

#195 - Clarify instruction for manual dedup

Issue - State: closed - Opened by LukasWallrich 7 months ago - 6 comments
Labels: Documentation

#194 - Fix example in compare_sources

Issue - State: open - Opened by LukasWallrich 7 months ago

#193 - Remove cite_string ?

Issue - State: closed - Opened by TNRiley 7 months ago - 3 comments
Labels: Question, Internal

#192 - Manual Deduplication Error

Issue - State: closed - Opened by TNRiley 7 months ago - 10 comments
Labels: Shiny Application, External factors

#191 - Deduplication crashes Shiny if there are no duplicates

Issue - State: closed - Opened by LukasWallrich 7 months ago - 3 comments
Labels: Shiny Application, External factors

#190 - Align argument name for citation tibble across functions

Issue - State: closed - Opened by LukasWallrich 7 months ago - 9 comments
Labels: invalid

#188 - Add the Precision/Sensitivity Table (precision_sensitivity_table) to tables page

Issue - State: closed - Opened by TNRiley 7 months ago - 1 comment
Labels: visualisation, Shiny Application

#187 - Add the Record Summary Table (record_summary_table) to tables page

Issue - State: closed - Opened by TNRiley 7 months ago - 1 comment
Labels: visualisation, Shiny Application

#186 - Filter out NA sources from citation summary table source list

Issue - State: open - Opened by TNRiley 7 months ago
Labels: visualisation, Internal

#185 - Add the Record Counts Table (record_counts_table) to tables page

Issue - State: closed - Opened by TNRiley 7 months ago - 1 comment
Labels: visualisation, Shiny Application

#184 - Add F-Score to precision_sensitivity_table

Issue - State: open - Opened by TNRiley 7 months ago
Labels: Enhancement, visualisation

#183 - Re-Importing .ris file from CiteSource (Web Shiny)

Issue - State: closed - Opened by TNRiley 7 months ago - 2 comments
Labels: Bug, Shiny Application

#182 - dedup_citations returns cite_source and cite_label twice

Issue - State: open - Opened by LukasWallrich 7 months ago - 4 comments
Labels: Output, Internal

#181 - Changing the export ris function so download RIS works...

Pull Request - State: closed - Opened by DrMattG 8 months ago

#180 - calculate_phase_count AND precision_sensitivity_table requirements

Issue - State: open - Opened by TNRiley 8 months ago
Labels: visualisation, Internal

#179 - Deduplication & Table errors when uploading files without URL field (3 Web of Science .ris example)

Issue - State: closed - Opened by TNRiley 8 months ago - 9 comments
Labels: Bug, Shiny Application, Priority

#178 - Re-Importing a bibtex file from CiteSource into ShinyApp

Issue - State: closed - Opened by rootsandberries 9 months ago - 6 comments
Labels: Bug, Shiny Application

#177 - RE-Importing a csv file exported from CiteSource into Shiny app

Issue - State: closed - Opened by rootsandberries 9 months ago - 5 comments
Labels: Bug, Shiny Application

#176 - RIS file not exporting from Shiny app

Issue - State: closed - Opened by rootsandberries 9 months ago - 6 comments

#175 - Install standard ci.yaml for r2u use

Pull Request - State: closed - Opened by eddelbuettel 9 months ago

#174 - Bring in additional metadata to support dedup

Issue - State: open - Opened by kaitlynhair 9 months ago - 1 comment
Labels: Enhancement, Internal, Next Version Priority

#173 - Admin access to this repo

Issue - State: closed - Opened by LukasWallrich 9 months ago - 1 comment

#172 - Shiny - disconnect from server on upload

Issue - State: closed - Opened by TNRiley 9 months ago - 10 comments
Labels: Bug, Shiny Application

#171 - ASySD dedup fixes

Pull Request - State: closed - Opened by kaitlynhair 10 months ago

#169 - Update CiteSource with ASySD functions

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Internal

#168 - Manual deduplication error in shiny

Issue - State: closed - Opened by TNRiley over 1 year ago - 2 comments

#167 - Shiny aesthetics

Pull Request - State: closed - Opened by kaitlynhair over 1 year ago

#166 - Dedup fixes

Pull Request - State: closed - Opened by kaitlynhair over 1 year ago

#165 - Considerations for the search summary table

Issue - State: closed - Opened by rootsandberries over 1 year ago - 4 comments

#164 - Error in manual deduplication step in Shiny App

Issue - State: closed - Opened by rootsandberries over 1 year ago - 2 comments

#163 - add ability to filter by screened or final labels on upset plot

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Enhancement, visualisation

#161 - Increase robustness of calculate_record_counts

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 9 comments

#160 - Treat identical citations always as duplicates?

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 4 comments

#159 - Package size

Issue - State: open - Opened by TNRiley over 1 year ago - 7 comments
Labels: Priority

#158 - shiny: metadata editing fails when files have the same name

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 1 comment

#157 - Fix numbers in manual dedup popup

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 1 comment

#156 - .rds use adding R>=3.5.0 dependency

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment

#155 - Increase robustness of calculate_phase_count

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 4 comments

#154 - Fix no visible binding NOTE

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 1 comment

#153 - Warning: Undocumented arguments in documentation object 'synthesisr_read_refs'

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment

#152 - Consolidated Shiny Items

Issue - State: open - Opened by TNRiley over 1 year ago - 7 comments
Labels: Shiny Application

#151 - Difference in deduplication between RAW and PROCESSED data

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Bug

#150 - Inaccurate sensitivity calculation on phase_counts table

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: visualisation, Internal

#149 - Bar chart inaccurate

Issue - State: closed - Opened by TNRiley over 1 year ago - 8 comments
Labels: Bug, visualisation

#148 - Add further calculations to tables

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Enhancement, visualisation

#147 - unique citations visual

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Enhancement, visualisation

#146 - large number of variables on upload

Issue - State: closed - Opened by TNRiley over 1 year ago - 8 comments

#145 - Citiation record table - missing markers

Issue - State: closed - Opened by TNRiley over 1 year ago - 3 comments
Labels: visualisation

#143 - Add Shiny pop out for manual deduplication

Issue - State: closed - Opened by TNRiley over 1 year ago - 1 comment
Labels: Shiny Application

#142 - Dedup dev

Pull Request - State: closed - Opened by kaitlynhair over 1 year ago

#141 - Remove raw data after deduplication in Shiny

Issue - State: closed - Opened by LukasWallrich over 1 year ago - 1 comment
Labels: Enhancement, Shiny Application

#140 - record_level_table adding Cite_source info on citations

Issue - State: closed - Opened by TNRiley over 1 year ago

#139 - Deploy YAML error

Issue - State: closed - Opened by TNRiley almost 2 years ago - 2 comments

#138 - CMD Note on dependencies

Issue - State: closed - Opened by TNRiley almost 2 years ago - 5 comments

#137 - Dedup_citations exporting two df again?

Issue - State: closed - Opened by TNRiley almost 2 years ago - 1 comment

#136 - Shiny: Maximum upload size

Issue - State: closed - Opened by TNRiley almost 2 years ago - 14 comments
Labels: Shiny Application

#135 - plots: source "unknown"

Issue - State: closed - Opened by TNRiley almost 2 years ago - 5 comments
Labels: visualisation

#134 - unique/duplicate Bar chart incorrectly displaying

Issue - State: closed - Opened by TNRiley almost 2 years ago - 1 comment

#133 - unique/duplicate Bar chart incorrectly displaying

Issue - State: closed - Opened by TNRiley almost 2 years ago - 1 comment

#132 - unique/duplicate Bar chart incorrectly displaying

Issue - State: closed - Opened by TNRiley almost 2 years ago - 6 comments
Labels: visualisation

#131 - GitHub actions edits

Pull Request - State: closed - Opened by DrMattG almost 2 years ago

#130 - Cant build vignettes

Issue - State: closed - Opened by DrMattG almost 2 years ago - 3 comments
Labels: Bug

#129 - Asysd dependency

Pull Request - State: closed - Opened by kaitlynhair almost 2 years ago

#128 - Add examplecitations as data in the package.

Pull Request - State: closed - Opened by DrMattG almost 2 years ago - 2 comments

#127 - Create check-and-deploy.yml

Pull Request - State: closed - Opened by DrMattG almost 2 years ago - 2 comments

#125 - Check that all exported functions have `@return` and `@examples`

Issue - State: open - Opened by TNRiley almost 2 years ago - 5 comments
Labels: Documentation, Help wanted, Priority

#124 - dedup_citations renames source to journal - problem when data is in journal

Issue - State: closed - Opened by LukasWallrich almost 2 years ago - 8 comments

#122 - Add examples to functions

Pull Request - State: closed - Opened by DrMattG almost 2 years ago - 4 comments

#121 - Change order of the vignettes in pkgdown?

Issue - State: closed - Opened by DrMattG almost 2 years ago - 3 comments

#120 - Table creation Initial upload/post internal deduplication

Issue - State: closed - Opened by TNRiley almost 2 years ago - 6 comments
Labels: Enhancement, visualisation

#119 - Deduplication temporarily duplicates entries

Issue - State: closed - Opened by LukasWallrich almost 2 years ago - 5 comments