Ecosyste.ms: Issues

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GitHub / EI-CoreBioinformatics/mikado issues and pull requests

#356 - mikado serialise error when loading blast results

Issue - State: closed - Opened by benedictcoombes over 3 years ago - 7 comments
Labels: enhancement, question

#355 - Let Mikado prepare parse BAM files directly

Issue - State: closed - Opened by lucventurini over 3 years ago
Labels: enhancement

#354 - Allow Mikado to use the attributes in the input files (GTF/GFF etc) as "external metrics"

Issue - State: closed - Opened by lucventurini over 3 years ago - 1 comment
Labels: enhancement, EI-Internal

#344 - Combining multi-sample GTF files

Issue - State: closed - Opened by mourisl almost 4 years ago - 4 comments
Labels: question

#343 - Filtering excessive resulting transcripts

Issue - State: closed - Opened by 14zac2 almost 4 years ago - 6 comments
Labels: question

#337 - Fast ORF caller for mikado

Issue - State: closed - Opened by urmi-21 almost 4 years ago - 7 comments

#335 - Bioconda Mikado Update?

Issue - State: closed - Opened by cassondranewman almost 4 years ago - 3 comments

#325 - MissingOuputException running Daijin

Issue - State: closed - Opened by NJeanray about 4 years ago - 14 comments
Labels: question

#324 - intron fraction is null

Issue - State: closed - Opened by lijing28101 about 4 years ago - 4 comments
Labels: bug, duplicate

#318 - Tuple index out of range error in mikado compare

Issue - State: closed - Opened by ddpinto about 4 years ago - 6 comments
Labels: bug

#313 - KeyError: 'transcript_id'

Issue - State: closed - Opened by chnych over 4 years ago - 5 comments

#310 - Various errors while running `mikado configure`

Issue - State: closed - Opened by LehmannN over 4 years ago - 12 comments

#308 - excessive run time for mikado prepare

Issue - State: closed - Opened by adamfreedman over 4 years ago - 8 comments

#307 - question about metrics file

Issue - State: closed - Opened by lijing28101 over 4 years ago - 1 comment
Labels: bug

#294 - Move to profiles for Daijin

Issue - State: closed - Opened by lucventurini over 4 years ago - 1 comment
Labels: enhancement, EI-Internal

#136 - Update documentation

Issue - State: closed - Opened by lucventurini almost 6 years ago - 5 comments
Labels: enhancement