Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / EGA-archive/ega-download-client issues and pull requests
#225 - pyEGA3 : 404 Client Error
Issue -
State: closed - Opened by aydzhouyuan 23 days ago
- 1 comment
Labels: bug
#224 - Cannot connect to server
Issue -
State: closed - Opened by Rane90 3 months ago
Labels: bug
#223 - EE-2809 Update development.md with instructions about tagging and release
Pull Request -
State: closed - Opened by aaclan-ebi 3 months ago
#222 - EE-2809 Check that the version file and git tag are the same
Pull Request -
State: closed - Opened by aaclan-ebi 3 months ago
#221 - EE-2610 Infer or autocorrect format in the genomic range cli args
Pull Request -
State: closed - Opened by aaclan-ebi 3 months ago
#220 - EE-2859 Add a readme for development
Pull Request -
State: closed - Opened by aaclan-ebi 4 months ago
#219 - potential tqdm issue
Issue -
State: open - Opened by maxim-h 5 months ago
- 2 comments
Labels: bug
#218 - Download seems to pause when detaching from screen session
Issue -
State: open - Opened by famosab 6 months ago
- 6 comments
Labels: bug
#217 - Function not implemented
Issue -
State: open - Opened by hmkim 7 months ago
Labels: bug
#216 - Problem When Downloading Files From EGA Using PyEGA3
Issue -
State: open - Opened by caozilongsupper 8 months ago
- 1 comment
Labels: bug
#215 - Issue with Dataset Visibility in PyEGA3
Issue -
State: closed - Opened by zhaowsong 8 months ago
- 1 comment
Labels: bug
#214 - Md5 mismatch
Issue -
State: open - Opened by BrendaLee1 8 months ago
Labels: bug
#213 - Cannot Download authorized dataset
Issue -
State: closed - Opened by farhan-lab 8 months ago
- 2 comments
#212 - EE-2785 Fix package job
Pull Request -
State: closed - Opened by aaclan-ebi 8 months ago
#211 - EE-2785 Pass user_id in the stats request
Pull Request -
State: closed - Opened by aaclan-ebi 8 months ago
#210 - This ticket has been untaken by ega-rt-support.
Issue -
State: closed - Opened by antonkratz 9 months ago
- 1 comment
Labels: bug
#209 - [Server Problem] almost impossible to read from server connection
Issue -
State: closed - Opened by TTTPOB 9 months ago
Labels: bug
#208 - The website `https://ega-archive.org/` is currently down ?
Issue -
State: closed - Opened by snijesh 9 months ago
- 1 comment
#207 - Download not working even with test data
Issue -
State: closed - Opened by mukamel-lab 10 months ago
- 2 comments
Labels: bug
#206 - 'Remote end closed connection without response' and other issues
Issue -
State: open - Opened by antonkratz 10 months ago
- 26 comments
Labels: bug
#205 - upgrade psutil requirement to 5.6.7
Pull Request -
State: open - Opened by AndreJesusBrito 11 months ago
#204 - Cannot connect to server
Issue -
State: closed - Opened by clai725 11 months ago
- 4 comments
Labels: bug
#203 - Download stuck at 0%
Issue -
State: closed - Opened by antonkratz 11 months ago
- 12 comments
Labels: bug
#202 - EE-2785 Post stats to file distribution stats endpoint
Pull Request -
State: closed - Opened by aaclan-ebi 11 months ago
#201 - There was a problem communicating with the EGA repository: 403 Client Error: for url: https://ega.ebi.ac.uk:8443/v2/metadata/files/EGAF00002043348
Issue -
State: closed - Opened by jianguozhouzunyimedicaluniversity 11 months ago
- 3 comments
Labels: bug
#200 - Alternative to pyega3 ?
Issue -
State: closed - Opened by PFRoux 12 months ago
- 4 comments
Labels: bug
#199 - Repeated aborted connections - forcibly closed.
Issue -
State: closed - Opened by JamesLeeLab 12 months ago
- 11 comments
Labels: bug
#198 - Bump requests from 2.26.0 to 2.31.0
Pull Request -
State: open - Opened by dependabot[bot] about 1 year ago
Labels: dependencies
#197 - [Errno 111] Connection refused - Docker
Issue -
State: closed - Opened by bertagayete about 1 year ago
- 1 comment
Labels: bug
#196 - Memory leak in client
Issue -
State: closed - Opened by s-andrews about 1 year ago
- 1 comment
Labels: bug
#195 - md5 check fails 2 times
Issue -
State: open - Opened by b-lac over 1 year ago
- 7 comments
Labels: bug
#194 - speed up the file checking process while resuming the download
Pull Request -
State: open - Opened by chiangtw over 1 year ago
#193 - Cannot download any more - Invalid username, password or secret key
Issue -
State: closed - Opened by jakalssj3 over 1 year ago
- 17 comments
Labels: bug
#192 - Multiple download issues with the latest pyEGA3-5.0.1 (now 5.0.2) which makes it almost impossible to download data successfully
Issue -
State: open - Opened by felis-silvestris98 over 1 year ago
- 40 comments
Labels: bug
#191 - Multiple download issues with the latest pyEGA3-5.0.1 which makes it almost impossible to download data successfully
Issue -
State: closed - Opened by felis-silvestris98 over 1 year ago
Labels: bug
#190 - "AttributeError: __enter__"
Issue -
State: open - Opened by sunnaa0423 over 1 year ago
- 4 comments
Labels: bug
#189 - EE-2650 Retry downloading the slice file if there is slice temp file
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
- 3 comments
#188 - EE-2467 Add functional tests for htsget
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
- 2 comments
#187 - Incorrect slice range requested to API when restarting from a partial download
Issue -
State: closed - Opened by bioruffo over 1 year ago
- 3 comments
Labels: bug
#186 - added file ID to messages
Pull Request -
State: closed - Opened by bioruffo over 1 year ago
#185 - EE-2630 Add dataset download in functional tests
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
#184 - Downloading slice of BAM recognized as complete but BAM download is incomplete
Issue -
State: open - Opened by JasperO98 over 1 year ago
- 9 comments
Labels: bug
#183 - Error downloading data - md5 values do not match
Issue -
State: closed - Opened by ccruizm over 1 year ago
- 13 comments
Labels: bug
#182 - EE-2630 Set fileStatus in file metadata json from new data api
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
#181 - Complete download without downloading any file
Issue -
State: closed - Opened by FlyPythons over 1 year ago
- 5 comments
Labels: bug
#180 - EE-2619 Update PyPI description
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
#179 - EE-2600 Add BCF and VCF to the format argument
Pull Request -
State: closed - Opened by andresfsilva over 1 year ago
#178 - EE-2602 Upgrade htsget and pass session-id header from htsget.get
Pull Request -
State: closed - Opened by aaclan-ebi over 1 year ago
- 3 comments
#177 - Error 104: Connection reset by peer
Issue -
State: closed - Opened by AnnaK135 over 1 year ago
- 1 comment
Labels: service
#176 - Long waiting time between authentication and begin of operation (e.g. download)
Issue -
State: closed - Opened by Tjorbenn over 1 year ago
- 5 comments
Labels: service
#175 - PyEGA downloads one chunk and reports download is complete
Issue -
State: closed - Opened by JasperO98 over 1 year ago
- 1 comment
Labels: service
#174 - Download Issues
Issue -
State: closed - Opened by ksarathbabu almost 2 years ago
- 1 comment
Labels: service
#173 - requests.exceptions.RetryError
Issue -
State: closed - Opened by Feng-Zhang almost 2 years ago
- 6 comments
Labels: service
#172 - IndexFileId not found even though it's available
Issue -
State: closed - Opened by JasperO98 almost 2 years ago
Labels: bug
#171 - Server stability is shockingly bad
Issue -
State: closed - Opened by Nusob888 almost 2 years ago
- 2 comments
Labels: service
#170 - Adjustments to make pyega3 compatible with the new file distribution API
Pull Request -
State: closed - Opened by aaclan-ebi almost 2 years ago
- 2 comments
#169 - Invalid username, password or secret key. 504 Server Error, even with the test user.
Issue -
State: closed - Opened by migrau almost 2 years ago
- 10 comments
Labels: service
#168 - requests.exceptions.HTTPError: 503 Server Error: Service Temporarily Unavailable for url: https://ega.ebi.ac.uk:8443/ega-openid-connect-server/token
Issue -
State: closed - Opened by sabrinacamp2 almost 2 years ago
- 10 comments
Labels: service
#167 - Error while downloading the dataset
Issue -
State: closed - Opened by alkurowska almost 2 years ago
- 5 comments
Labels: service
#166 - ega-openid-connect-server returns 400 error on bad credentials
Issue -
State: closed - Opened by delocalizer almost 2 years ago
- 1 comment
Labels: bug, enhancement
#165 - Client should retry when authentication issue is server-side
Issue -
State: closed - Opened by delocalizer almost 2 years ago
- 1 comment
Labels: bug, enhancement
#164 - EE-1405 Python client support for new Data API
Pull Request -
State: closed - Opened by afoix almost 2 years ago
#163 - Allow separate data and metadata URIs
Pull Request -
State: closed - Opened by afoix almost 2 years ago
#162 - Invalid username, password or secret key
Issue -
State: closed - Opened by hw538 about 2 years ago
- 9 comments
Labels: service
#161 - EE-2310 Include version file in the package
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
#160 - Ee 2310 add version command
Pull Request -
State: closed - Opened by CsabaHalmagyi about 2 years ago
#159 - EE-2450 Exit with failure code 1 when there is an exception in executing command
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
- 2 comments
#158 - EE-2426 Retry GET json to retry GET file metadata HTTP 500 error
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
#157 - Exit code 0 but "Could not communicate with the EGA repository because of an error on the server"
Issue -
State: closed - Opened by stsergbg about 2 years ago
- 5 comments
Labels: bug
#156 - Please return --saveto option
Issue -
State: closed - Opened by stsergbg about 2 years ago
Labels: enhancement
#155 - EE-2418 Run functional tests in the pipeline
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
- 1 comment
#154 - EE-2375 Fix fresh install
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
#153 - EE-2375 Fix version log deployment
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
#152 - EE-2375 Fix cli version in the logging
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
- 2 comments
#151 - Terrible download experience. Infeasible to download datasets. Multiple errors while downloading datasets.
Issue -
State: closed - Opened by Beiusxzw about 2 years ago
- 12 comments
Labels: service
#150 - EE-2375 Use retry policy for requests
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
- 2 comments
#149 - EE-2375 Reuse valid file slices on retries
Pull Request -
State: closed - Opened by aaclan-ebi about 2 years ago
#148 - Preliminary fix for partial download resume functionality
Pull Request -
State: closed - Opened by YourePrettyGood about 2 years ago
- 1 comment
#147 - EGA client not able to download all the files within a dataset
Issue -
State: closed - Opened by chriss1313 over 2 years ago
- 4 comments
Labels: bug, service
#146 - Display correct error message instead of "Invalid username, password or secret key" for fresh accounts
Issue -
State: closed - Opened by ghuls over 2 years ago
- 5 comments
Labels: enhancement
#145 - filaled to download
Issue -
State: closed - Opened by jianguozhouzunyimedicaluniversity over 2 years ago
- 9 comments
Labels: service
#144 - issue: “Invalid Username, Password, or Secret Key”
Issue -
State: closed - Opened by toddey over 2 years ago
- 1 comment
Labels: service
#143 - HTTP Error
Issue -
State: closed - Opened by ZhangXiangye over 2 years ago
- 1 comment
Labels: general
#142 - Fix type str to int because chaneg son python version
Pull Request -
State: closed - Opened by afoix over 2 years ago
Labels: bug
#141 - Invalid Username, Password, or Secret Key
Issue -
State: closed - Opened by mdbarnesUCSD over 2 years ago
- 1 comment
Labels: service
#140 - Download genomic region using BED file as input
Issue -
State: closed - Opened by hubentu over 2 years ago
- 3 comments
Labels: enhancement
#139 - file_from and file_length type wrong for resume to work
Issue -
State: closed - Opened by FlyPythons over 2 years ago
- 1 comment
Labels: bug
#138 - EE-2210: explained transition from --saveto to --output-dir.
Pull Request -
State: closed - Opened by bela-juhasz over 2 years ago
#137 - EE-2210: explained transition from --saveto to --output-dir and increased version number
Pull Request -
State: closed - Opened by bela-juhasz over 2 years ago
#136 - Having trouble running test dataset
Issue -
State: closed - Opened by jalalsiddiqui over 2 years ago
- 2 comments
Labels: service
#135 - The --saveto command-line arg is now called --output-dir and can only specify a directory and not an output-file
Pull Request -
State: closed - Opened by bela-juhasz over 2 years ago
#134 - The --saveto command-line arg is now called --output-dir and can only specify a directory and not an output-file.
Pull Request -
State: closed - Opened by bela-juhasz almost 3 years ago
#133 - EE-2115 Add improved handling of our 500 (internal server) errors
Pull Request -
State: closed - Opened by afoix almost 3 years ago
Labels: enhancement
#132 - EE-2172 Add option to print log in JSON format
Pull Request -
State: closed - Opened by afoix almost 3 years ago
Labels: enhancement
#131 - EE-2108: files are saved into a directory when --saveto specifies a directory
Pull Request -
State: closed - Opened by bela-juhasz almost 3 years ago
#130 - EE-1445 Warning if users try to download more data than they have free space
Pull Request -
State: closed - Opened by afoix almost 3 years ago
Labels: enhancement
#129 - ISSUE-127 This closes #127 fixing the regex
Pull Request -
State: closed - Opened by afoix almost 3 years ago
#128 - Completed slices aren't checked in download_file_slice
Issue -
State: closed - Opened by torptube almost 3 years ago
- 4 comments
Labels: bug
#127 - Regular expression is too greedy for resume to work
Issue -
State: closed - Opened by torptube almost 3 years ago
Labels: bug
#126 - EE-1421 pyega3 notify the user if required ports are closed
Pull Request -
State: closed - Opened by afoix almost 3 years ago