Ecosyste.ms: Issues

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GitHub / EBI-Metagenomics/fetch_tool issues and pull requests

#33 - Adjust the tool to download private data using EBI's Fire

Pull Request - State: open - Opened by mberacochea 3 months ago

#32 - Prep for new release

Pull Request - State: closed - Opened by mberacochea 3 months ago

#31 - Bugfix Deadlock when getting the lock

Pull Request - State: closed - Opened by mberacochea 3 months ago - 1 comment

#30 - The system is retrying even if the file already exists.

Pull Request - State: closed - Opened by mberacochea 5 months ago

#29 - Stop the retries if the file already exists

Pull Request - State: closed - Opened by mberacochea 5 months ago

#28 - Add platform metadata to prj.txt file

Pull Request - State: closed - Opened by Ge94 6 months ago

#27 - Feature/extend metadata platform

Pull Request - State: closed - Opened by Ge94 6 months ago

#26 - Removed Aspera, added boto3 + FIRE and some refactoring

Pull Request - State: closed - Opened by mberacochea 7 months ago

#24 - Container file & bump2version configuration

Pull Request - State: closed - Opened by mberacochea over 1 year ago

#23 - Feature/pyproject

Pull Request - State: closed - Opened by mberacochea over 1 year ago

#21 - the `-r` argument for private data is missing (i think)

Issue - State: open - Opened by hariszaf over 2 years ago

#20 - Dockerfile for the fetch tool

Pull Request - State: closed - Opened by hariszaf over 2 years ago - 1 comment

#19 - New release (v0.8.0)

Pull Request - State: closed - Opened by mberacochea over 2 years ago

#18 - Aspera backend support.

Pull Request - State: closed - Opened by mberacochea over 2 years ago - 4 comments

#17 - Syncing master and dev

Pull Request - State: closed - Opened by mberacochea over 2 years ago

#16 - Pull assemblies from the ENA filereport API if the portal API doesn't return the data

Pull Request - State: closed - Opened by mberacochea over 2 years ago - 1 comment

#14 - Config file and dev env, and configuration file flag improvement

Pull Request - State: closed - Opened by mberacochea almost 3 years ago

#13 - ftp timeout

Pull Request - State: closed - Opened by Vkale1 almost 4 years ago

#12 - replace DB with API

Pull Request - State: closed - Opened by Vkale1 about 4 years ago

#11 - request method is not considering non 200 respones

Issue - State: open - Opened by mberacochea over 4 years ago
Labels: bug

#10 - remove trusted brokers filter

Pull Request - State: closed - Opened by Vkale1 over 4 years ago

#9 - Develop

Pull Request - State: closed - Opened by mscheremetjew about 5 years ago

#8 - Develop

Pull Request - State: closed - Opened by mscheremetjew about 5 years ago

#6 - Docker

Pull Request - State: closed - Opened by mb1069 almost 6 years ago

#5 - Develop

Pull Request - State: closed - Opened by mb1069 almost 6 years ago

#4 - Refactored reads and assembly fetching for code simplification

Pull Request - State: closed - Opened by mb1069 almost 6 years ago

#3 - Fetch reads lock

Pull Request - State: closed - Opened by mb1069 about 6 years ago

#2 - Integrated fetch script for raw read file retrieval

Pull Request - State: closed - Opened by mscheremetjew about 6 years ago

#1 - Merged master into dev.

Pull Request - State: closed - Opened by mscheremetjew about 6 years ago