Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / Dowell-Lab/DAStk issues and pull requests
#40 - Error about differential_md_score.py line 273
Issue -
State: open - Opened by hongjianjin 4 months ago
#39 - OSError: ["Can't find mysql at path mysql", "Can't find path to fetchChromsizes"]
Issue -
State: open - Opened by konradtaube 7 months ago
- 1 comment
#38 - tf_result_explanations - AttributeError: module 'networkx' has no attribute 'read_gpickle'
Issue -
State: open - Opened by sngholee 7 months ago
- 1 comment
#37 - tf_result_explanations error
Issue -
State: closed - Opened by sngholee 8 months ago
- 2 comments
#36 - Issue while trying to generate MA plot and barcode plot. PLEASE HELP!
Issue -
State: closed - Opened by Divya6805 9 months ago
- 3 comments
#35 - Not able to generate MA plot and Barcode Plot
Issue -
State: closed - Opened by Divya6805 9 months ago
- 3 comments
#34 - Invalid links for the pre-scanned motif files
Issue -
State: closed - Opened by jcbusch 11 months ago
- 2 comments
#33 - Issue with atac_process
Issue -
State: closed - Opened by chlazaris over 1 year ago
- 13 comments
#32 - Error while create MD score file
Issue -
State: closed - Opened by HieuNg1598 almost 2 years ago
- 1 comment
#31 - Syntax Error in tf_intersect.py
Issue -
State: closed - Opened by andrewbcaldwell over 4 years ago
- 3 comments
#30 - process_atac issue
Issue -
State: closed - Opened by daramirez over 4 years ago
- 1 comment
#29 - Columns produced by differential_md_score function
Issue -
State: closed - Opened by TobyGurran over 4 years ago
- 3 comments
Labels: documentation
#28 - Throw an error if both --genome and --chromosomes are specified
Issue -
State: closed - Opened by ignaciot over 4 years ago
- 2 comments
Labels: to do
#27 - Error in performing process_atac
Issue -
State: closed - Opened by arnavgupta06754 almost 5 years ago
- 11 comments
#26 - Bug fixes
Pull Request -
State: closed - Opened by magruca almost 5 years ago
#25 - Incorrect Shebang for Executables
Issue -
State: closed - Opened by zmaas almost 5 years ago
- 1 comment
#24 - no error if there are no motif files in the dir
Issue -
State: closed - Opened by maallen3 about 5 years ago
- 2 comments
#23 - Hardcoded X-axis label
Issue -
State: closed - Opened by LuisSoares about 5 years ago
- 1 comment
#22 - Bugfix - Variable name typo as reported in #21
Pull Request -
State: closed - Opened by magruca about 5 years ago
#21 - control_barcode should be control_barcodes in barcode_plot.py
Issue -
State: closed - Opened by joshuamb about 5 years ago
- 4 comments
#20 - Need to fix barcode labels for filenames with long names in differential_atac
Issue -
State: closed - Opened by magruca about 5 years ago
- 1 comment
#19 - Need to implement more checks before starting job
Issue -
State: closed - Opened by magruca about 5 years ago
- 1 comment
#18 - Dastk breaks without scikit-learn and futures
Issue -
State: closed - Opened by tiagobrc about 5 years ago
- 2 comments
Labels: bug
#17 - Ability to manually provide genome description
Issue -
State: closed - Opened by ignaciot over 5 years ago
- 2 comments
Labels: enhancement
#16 - Git clone installation method in README points to wrong commit
Issue -
State: closed - Opened by rdbcasillas over 5 years ago
- 1 comment
#15 - replicate handling
Issue -
State: open - Opened by magruca over 5 years ago
- 3 comments
Labels: enhancement
#14 - Add window size flag
Issue -
State: closed - Opened by andrewbcaldwell over 5 years ago
- 2 comments
Labels: enhancement, to do
#13 - Add version flag
Issue -
State: closed - Opened by ignaciot over 5 years ago
- 2 comments
Labels: enhancement
#12 - Bootstrap
Pull Request -
State: closed - Opened by ignaciot over 5 years ago
#11 - Bugfix #10: Prevented accidental over-counting of overlapping regions…
Pull Request -
State: closed - Opened by ignaciot over 5 years ago
#10 - Possible scenarios for overcounting overlaps with motif sites
Issue -
State: closed - Opened by ignaciot over 5 years ago
- 1 comment
Labels: bug
#9 - Enhancement #8: New params to provide labels for the MA plot.
Pull Request -
State: closed - Opened by ignaciot over 5 years ago
#8 - New parameters to provide a text label for assays 1 and 2
Issue -
State: closed - Opened by ignaciot over 5 years ago
- 1 comment
Labels: enhancement
#7 - New parameter to produce a tsv of all MD-scores, sorted by p-value
Issue -
State: closed - Opened by ignaciot over 5 years ago
- 1 comment
Labels: enhancement
#6 - try alternative to pooled variance
Issue -
State: closed - Opened by magruca over 5 years ago
- 2 comments
#5 - value error... change to float?
Issue -
State: closed - Opened by magruca over 5 years ago
- 3 comments
Labels: bug
#4 - output changes in differential MDS
Issue -
State: closed - Opened by magruca over 5 years ago
- 3 comments
Labels: doing, addition