Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / Donders-Institute/bidscoin issues and pull requests
#240 - Do not "over-write" README
Issue -
State: closed - Opened by Remi-Gau 27 days ago
- 3 comments
#239 - Add a user-friendly way to handle bidsmapping exceptions
Issue -
State: closed - Opened by marcelzwiers 3 months ago
- 1 comment
Labels: enhancement
#238 - Merge all bidsapps to a single bidscoin bidsapp
Issue -
State: closed - Opened by marcelzwiers 4 months ago
- 1 comment
Labels: enhancement
#236 - Unable to find dicoms in the tmp directory that the program creates
Issue -
State: closed - Opened by MRIDude 5 months ago
- 2 comments
#235 - Quickly add common tags in BIDSMapper/editor
Issue -
State: closed - Opened by thomshaw92 5 months ago
- 2 comments
#234 - [FIX] fix name undefinted variable in nibabel2bids.py
Pull Request -
State: closed - Opened by Remi-Gau 6 months ago
- 1 comment
#233 - typo in nibabel2bids.py
Issue -
State: closed - Opened by Remi-Gau 6 months ago
- 1 comment
#232 - Postfix error
Issue -
State: closed - Opened by madeleinebarter 6 months ago
- 9 comments
Labels: bug
#231 - New BIDS feature of dcm2niix
Issue -
State: closed - Opened by mateuszpawlik 6 months ago
- 2 comments
#230 - IndexError: string index out of range in dcm2niix2bids.py
Issue -
State: closed - Opened by mateuszpawlik 7 months ago
- 6 comments
#229 - Exclude sections behaves weirdly
Issue -
State: closed - Opened by mateuszpawlik 7 months ago
- 53 comments
Labels: wontfix
#228 - B0FieldSource as a list
Issue -
State: closed - Opened by mateuszpawlik 7 months ago
- 12 comments
Labels: bug
#227 - Update targets if run-1 added in increment_runindex within dcm2niixfiles loop
Pull Request -
State: closed - Opened by DominikaZ 8 months ago
- 8 comments
#226 - Can path to .bidscoin be configured?
Issue -
State: closed - Opened by mateuszpawlik 8 months ago
- 62 comments
#225 - Bidsmap schema doesn't require meta key in plugin
Issue -
State: closed - Opened by mateuszpawlik 8 months ago
- 17 comments
#224 - Add easy to check output with information on what source was converted to what BIDS files
Pull Request -
State: closed - Opened by DominikaZ 8 months ago
- 10 comments
#223 - Make a bids2bids template bidsmap
Issue -
State: closed - Opened by marcelzwiers 8 months ago
Labels: enhancement
#222 - Clicking on item in bidsmapper GUI crashes program
Issue -
State: closed - Opened by DominikaZ 8 months ago
- 1 comment
#221 - bidscoiner function leaves out every sequence
Issue -
State: closed - Opened by rbonicel 8 months ago
- 65 comments
#220 - Add CSA header support
Pull Request -
State: closed - Opened by DominikaZ 9 months ago
- 20 comments
#219 - Add CSA header support
Issue -
State: closed - Opened by DominikaZ 9 months ago
- 9 comments
#218 - Derivatives data
Issue -
State: closed - Opened by DominikaZ 9 months ago
- 4 comments
#217 - Add easy to check output with information on what source was converted to what BIDS files
Issue -
State: closed - Opened by DominikaZ 9 months ago
- 13 comments
Labels: enhancement
#216 - Add codespell: configuration, workflow + make it fix some typos
Pull Request -
State: closed - Opened by yarikoptic 9 months ago
- 2 comments
#215 - Add only existing jsonfiles to jsonfiles and make it set
Pull Request -
State: closed - Opened by DominikaZ 9 months ago
- 1 comment
#214 - Append dcm2niix postfix to acq only if acq is not defined
Pull Request -
State: closed - Opened by DominikaZ 10 months ago
- 10 comments
#213 - Fix dynamic <<>> runindex
Pull Request -
State: closed - Opened by DominikaZ 10 months ago
- 24 comments
#212 - Using `PhaseEncodingDirection` field to distinguish sequences
Issue -
State: closed - Opened by djoerch 10 months ago
- 6 comments
Labels: enhancement
#211 - ERROR | Could not parse required sub-<label> label
Issue -
State: closed - Opened by rbonicel 10 months ago
- 57 comments
#210 - cannot import name 'files' from 'importlib.resources'
Issue -
State: closed - Opened by aribesik 10 months ago
- 5 comments
Labels: bug
#209 - Failed to execute bidscoin with 4.2.1
Issue -
State: closed - Opened by AzyshFotbnxe 10 months ago
- 2 comments
#208 - Add citation information for plugin tools
Issue -
State: closed - Opened by wtclarke 11 months ago
- 6 comments
#207 - Update workflow.rst
Pull Request -
State: closed - Opened by schoffelen 12 months ago
#206 - Update bidscoin on Neurodesk
Issue -
State: closed - Opened by karl-koschutnig 12 months ago
- 2 comments
#205 - spec2nii `anon` option does not create de-identified nii/json outputs
Issue -
State: closed - Opened by schorschinho 12 months ago
- 5 comments
#204 - bidscoiner with -session option
Issue -
State: closed - Opened by karl-koschutnig about 1 year ago
- 18 comments
#203 - Qt GUI toolkit not working on WSL 2 (kali-linux)
Issue -
State: closed - Opened by giurdeluca about 1 year ago
- 7 comments
#202 - dicomsort outputfolder
Issue -
State: closed - Opened by FreyCap about 1 year ago
- 1 comment
#201 - Take the `dir` value from dcm2niix's sidecar file
Issue -
State: closed - Opened by marcelzwiers about 1 year ago
- 1 comment
Labels: enhancement
#200 - Add the possibility to track bidscoin usage
Issue -
State: closed - Opened by marcelzwiers about 1 year ago
- 6 comments
Labels: enhancement
#199 - Values in (0021,1106) vary per fmap acquisition
Issue -
State: closed - Opened by marcelzwiers about 1 year ago
- 1 comment
Labels: bug
#198 - Update B0fieldIdentifier/Source when having multiple fieldmap runs
Issue -
State: closed - Opened by marcelzwiers about 1 year ago
- 31 comments
Labels: enhancement
#197 - Store user settings in a personal config file
Issue -
State: closed - Opened by marcelzwiers about 1 year ago
Labels: enhancement
#195 - Add dynamic run index <<>> option
Pull Request -
State: closed - Opened by DominikaZ about 1 year ago
- 12 comments
#194 - Difficulty re-running bidscoiner with new participants (maybe file location related?)
Issue -
State: closed - Opened by thomshaw92 about 1 year ago
- 6 comments
#193 - No module named 'pytest' while executing bidsmapper
Issue -
State: closed - Opened by mateuszpawlik about 1 year ago
- 6 comments
#192 - First working version to implement argparse-manpage
Pull Request -
State: closed - Opened by marcelzwiers about 1 year ago
- 8 comments
#191 - bidscoin automatically adds `*.nii*` to IntendedFor file name pattern
Issue -
State: closed - Opened by mateuszpawlik over 1 year ago
- 2 comments
#190 - Please clarify GPLv3 licensing
Issue -
State: closed - Opened by musicinmybrain over 1 year ago
- 3 comments
#189 - bidscoin pip install fails on apple silicon
Issue -
State: closed - Opened by dkp over 1 year ago
- 25 comments
#188 - Can I use dynamic value to fill in a suffix
Issue -
State: closed - Opened by mateuszpawlik over 1 year ago
- 14 comments
#187 - fix typo
Pull Request -
State: closed - Opened by schoffelen over 1 year ago
- 1 comment
#186 - Support for CT images or guideline for user to add additional modalities
Issue -
State: closed - Opened by yehman over 1 year ago
- 8 comments
Labels: enhancement
#185 - Does the combination of `nibabel2bids` with `spec2niibids` change a Nifti file or just rename it?
Issue -
State: closed - Opened by ella09may over 1 year ago
- 6 comments
#184 - Fail to convert DWI DICOM files with Errorcode 139: Segmentation fault (core dumped))
Issue -
State: closed - Opened by ella09may over 1 year ago
- 3 comments
#183 - Relative paths in provenance attribute of runs in the bidsmap
Issue -
State: closed - Opened by djoerch over 1 year ago
- 3 comments
#182 - dashes in DICOM field causing error in pet2bids plugin
Issue -
State: closed - Opened by yehman over 1 year ago
- 3 comments
#181 - dicomsort could fail more gracefully when SeriesNumber is missing
Issue -
State: closed - Opened by yehman over 1 year ago
- 13 comments
#180 - ENH: skip files in hidden folders.
Pull Request -
State: closed - Opened by djoerch over 1 year ago
- 1 comment
#179 - documentation: program name
Issue -
State: closed - Opened by michaelf500 over 1 year ago
- 5 comments
#178 - Date shift(s) when dataset bidsification happens in multiple code calls.
Issue -
State: closed - Opened by smoia over 1 year ago
- 3 comments
#177 - Fail to run dcm2niix due to its version
Issue -
State: closed - Opened by colIapse over 1 year ago
- 4 comments
#176 - Pet spreadsheets
Pull Request -
State: closed - Opened by marcelzwiers over 1 year ago
#175 - [ENH] PETXLSX Support
Pull Request -
State: closed - Opened by bendhouseart over 1 year ago
- 9 comments
#173 - PAR / REC to BIDS
Issue -
State: closed - Opened by marcelzwiers over 1 year ago
- 7 comments
Labels: bug
#172 - /raw is implicitly assumed despite specifying a different source folder
Issue -
State: closed - Opened by themeo over 1 year ago
- 3 comments
#171 - dicomsort session / bidsmap task-name
Issue -
State: closed - Opened by karl-koschutnig over 1 year ago
- 6 comments
#170 - Issue with bidsmapper, "is not the subpath"
Issue -
State: closed - Opened by sanosenx86 over 1 year ago
- 5 comments
#169 - FIX: add dcm2niix build options for jpeg2000 support in singularity definition.
Pull Request -
State: closed - Opened by djoerch over 1 year ago
- 1 comment
#166 - Unexpected `<<filepath:...>>` change within bidsmap.yaml
Issue -
State: closed - Opened by mabiede over 1 year ago
- 14 comments
#165 - fieldmap - EffectiveEchoTime
Issue -
State: closed - Opened by karl-koschutnig over 1 year ago
- 8 comments
#164 - Pet2bids (dicom only)
Pull Request -
State: closed - Opened by bendhouseart over 1 year ago
- 24 comments
#163 - DICOMDIR-data, missing temp folders / provenance store
Issue -
State: closed - Opened by karl-koschutnig almost 2 years ago
- 40 comments
Labels: bug
#162 - dcm2niix failed to run error 3
Issue -
State: closed - Opened by fooms2512 almost 2 years ago
- 27 comments
Labels: bug
#161 - Catch ValueError if run is not specified by user for new version of addmetadata
Pull Request -
State: closed - Opened by smoia almost 2 years ago
- 5 comments
#160 - Declare minimum tqdm version required for compatibility
Pull Request -
State: closed - Opened by smoia almost 2 years ago
#159 - Catch possible ValueError if run is not specified by user
Pull Request -
State: closed - Opened by smoia almost 2 years ago
#158 - bidsmapper crashes when trying to test BIDScoin tools and settings (from GUI)
Issue -
State: closed - Opened by smoia almost 2 years ago
- 1 comment
#157 - 'vox' field does not get parsed from bidsmap
Issue -
State: closed - Opened by schorschinho almost 2 years ago
- 16 comments
Labels: enhancement
#156 - Pass different arguments to spec2nii plugin depending on run item
Issue -
State: closed - Opened by schorschinho almost 2 years ago
- 13 comments
Labels: wontfix
#155 - Register a Research Resource Identifier (RRID) for BIDScoin
Issue -
State: closed - Opened by robertoostenveld almost 2 years ago
- 1 comment
#154 - Philips MRS data: Need help mapping *_act.sdat and *_ref.sdat to *_svs.nii and *_ref.nii
Issue -
State: closed - Opened by schorschinho almost 2 years ago
- 2 comments
#153 - /bin/sh: 1: module: not found
Issue -
State: closed - Opened by dmd about 2 years ago
- 2 comments
#152 - KeyError when run without making any changes
Issue -
State: closed - Opened by dmd about 2 years ago
- 18 comments
Labels: bug
#151 - singularity version fails on ImportError
Issue -
State: closed - Opened by dmd about 2 years ago
- 6 comments
#150 - Converting fmap from MPM-dataset
Issue -
State: closed - Opened by karl-koschutnig about 2 years ago
- 4 comments
#149 - GE DICOM incorrectly detected as P-File
Issue -
State: closed - Opened by ajschadler12 about 2 years ago
- 7 comments
#148 - Handling ABCD GE pepolar sequences and other split-files.
Issue -
State: closed - Opened by ajschadler12 about 2 years ago
- 11 comments
Labels: bug
#147 - default readme in BIDS dataset after conversion
Issue -
State: closed - Opened by Remi-Gau about 2 years ago
- 2 comments
Labels: enhancement
#146 - Dynamic values are evaluated although a sequence is not a match for run-item
Issue -
State: closed - Opened by mateuszpawlik over 2 years ago
- 11 comments
Labels: bug
#145 - Bideditor haves trouble opening, using a non fixed prefix
Issue -
State: closed - Opened by ccomella over 2 years ago
- 3 comments
#144 - Create bidsmap_sst.yaml
Pull Request -
State: closed - Opened by renginys over 2 years ago
#143 - PyQt5 fails on RHEL 7.5
Issue -
State: closed - Opened by caldodge over 2 years ago
- 16 comments
#142 - Error when installing from GitHub: "fatal: No url found for submodule path 'tests/testdata' in .gitmodules"
Issue -
State: closed - Opened by Catyre over 2 years ago
- 3 comments
#141 - Error when using rawmapper: "AttributeError: 'str' object has no attribute 'name'"
Issue -
State: closed - Opened by Catyre over 2 years ago
- 1 comment
#140 - dcm2niix setup issue.
Issue -
State: closed - Opened by TamerGezici over 2 years ago
- 6 comments
#139 - Getting 'TypeError: 'NoneType' object is not subscriptable' when testing BIDScoin
Issue -
State: closed - Opened by Catyre over 2 years ago
- 4 comments
#138 - No dicom mapping results
Issue -
State: closed - Opened by landge over 2 years ago
- 3 comments
#137 - module add dcm2niix fails (mac OS)
Issue -
State: closed - Opened by amhaun01 over 2 years ago
- 2 comments
#136 - bidseditor GUI missing "DICOM mappings" and "PAR mappings" tabs
Issue -
State: closed - Opened by DanNBullock over 2 years ago
- 5 comments