Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / DiamondLightSource/ispyb-api issues and pull requests
#212 - ISPyB ORM schema update v4.1.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server 3 months ago
#211 - Use DATABASE_SCHEMA version 4.10.0
Pull Request -
State: closed - Opened by KarlLevik 3 months ago
#210 - Use context manager interface to open ispyb connection
Pull Request -
State: closed - Opened by isikhar 4 months ago
- 1 comment
#209 - Use stored procedure retrieve_grid_info_for_dc_v2
Pull Request -
State: closed - Opened by KarlLevik 6 months ago
- 1 comment
#208 - Update DATABASE_SCHEMA to 4.0.1
Pull Request -
State: closed - Opened by KarlLevik 6 months ago
- 1 comment
#207 - ISPyB ORM schema update v3.0.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server 7 months ago
#206 - (DiamondLightSource/hyperion#888) Rename pixelsPerMicron to micronsPerPixel
Pull Request -
State: closed - Opened by rtuck99 7 months ago
#205 - Rm method insert_motion_correction_drift in the EMAcquisition class
Pull Request -
State: closed - Opened by KarlLevik 9 months ago
#204 - Replace use of procrunner with subprocess
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
- 1 comment
#203 - Require mysql-connector-python>=8.0.32
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
#202 - Cannot use Python 3.11 as pinned mysql-connector-python version is not available on conda-forge
Issue -
State: closed - Opened by PeterC-DLS about 1 year ago
- 4 comments
#201 - Add catalog-info for dev portal
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
- 2 comments
#200 - ISPyB ORM schema update v2.0.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 1 year ago
#199 - Update to ispyb-database v2.0.0 in CI
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
#198 - Restrict Sphinx to be <7
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
#197 - Add suggestion to update database schema via PR
Pull Request -
State: closed - Opened by rjgildea about 1 year ago
- 2 comments
#196 - ISPyB ORM schema update v1.36.1
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 1 year ago
#195 - ISPyB ORM schema update v1.35.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 1 year ago
#194 - ISPyB ORM schema update v1.35.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 1 year ago
#193 - ISPyB ORM schema update v1.34.1
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 1 year ago
#192 - ISPyB ORM schema update v1.34.1
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 1 year ago
#191 - Fix ispyb.job --new option broken by ispyb.model removal
Pull Request -
State: closed - Opened by rjgildea over 1 year ago
#190 - New method update_dc_append_comments
Pull Request -
State: closed - Opened by KarlLevik over 1 year ago
#189 - Update ISPyB ORM schema to database schema v1.34.0
Pull Request -
State: closed - Opened by HorstmannA over 1 year ago
#188 - Remove deprecated ``ispyb.model``
Pull Request -
State: closed - Opened by rjgildea over 1 year ago
#187 - ISPyB ORM schema update v1.33.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 1 year ago
#186 - Add support/CI for Python 3.11
Pull Request -
State: closed - Opened by rjgildea over 1 year ago
#185 - ispyb.job bug fix: sweep may start counting at 0
Pull Request -
State: closed - Opened by rjgildea over 1 year ago
#184 - 183: Pin mysql connector version
Pull Request -
State: closed - Opened by DominicOram almost 2 years ago
#183 - Latest mysql connector versions fail for utf8 chars
Issue -
State: closed - Opened by DominicOram almost 2 years ago
- 5 comments
#182 - ISPyB ORM schema update v1.31.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server almost 2 years ago
#181 - Update database schema and call proc insert_subsample_for_image_full_path_v2
Pull Request -
State: closed - Opened by KarlLevik almost 2 years ago
#180 - ISPyB ORM schema update v1.30.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server almost 2 years ago
#179 - Using `ispyb.open` causes ispyb.model deprecation warning
Issue -
State: open - Opened by ndevenish about 2 years ago
#178 - Support Python 3.10
Pull Request -
State: closed - Opened by Anthchirp about 2 years ago
#177 - ISPyB ORM schema update v1.29.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 2 years ago
#176 - Test against newer ISPyB database schema version (1.29)
Pull Request -
State: closed - Opened by Anthchirp about 2 years ago
#175 - Actually tag the ISPyB ORM schema
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 2 years ago
#174 - Tag generated ISPyB ORM schema with version number
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 2 years ago
#173 - ISPyB ORM schema update v1.28.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server about 2 years ago
- 2 comments
#172 - Add SQLAlchemy interface to documentation
Pull Request -
State: closed - Opened by rjgildea over 2 years ago
- 1 comment
#171 - Add better enum support for "experimenttype"
Issue -
State: open - Opened by DominicOram over 2 years ago
- 1 comment
#170 - Drop Python 3.6 support
Issue -
State: closed - Opened by Anthchirp over 2 years ago
#169 - trouble with get_processing_program interface function
Issue -
State: closed - Opened by dsclassen over 2 years ago
- 5 comments
#168 - mx_data_reduction_to_ispyb does not upsert processingStatus from autoPROC.xml
Issue -
State: closed - Opened by dsclassen over 2 years ago
- 2 comments
#167 - ISPyB ORM schema update v1.28.0
Pull Request -
State: closed - Opened by DiamondLightSource-build-server over 2 years ago
#166 - Run tests against ORM 1.28.0
Pull Request -
State: closed - Opened by Anthchirp over 2 years ago
#165 - ispyb-database v1.28.0
Pull Request -
State: closed - Opened by rjgildea over 2 years ago
- 3 comments
#164 - Precommit updates
Pull Request -
State: closed - Opened by Anthchirp over 2 years ago
#163 - a basic datacollection simulator
Pull Request -
State: closed - Opened by stufisher almost 3 years ago
- 4 comments
#162 - de-dls ispyb.job
Pull Request -
State: closed - Opened by stufisher almost 3 years ago
- 3 comments
#161 - Update ISPyB database version.
Pull Request -
State: closed - Opened by HorstmannA almost 3 years ago
#160 - Catch 'execute command denied to user' DB errors
Pull Request -
State: closed - Opened by Anthchirp almost 3 years ago
#159 - Update EM insert methods for new stored procedures
Pull Request -
State: closed - Opened by d-j-hatton almost 3 years ago
- 1 comment
#158 - Update SQLAlchemy ORM models to ispyb-database v1.25.0
Pull Request -
State: closed - Opened by rjgildea almost 3 years ago
- 1 comment
#157 - Add ability to store values for the new column AutoProcScalingStatistics.resIOverSigI2
Pull Request -
State: closed - Opened by KarlLevik almost 3 years ago
#156 - Update SQLAlchemy ORM models for ispyb-database v1.23.1
Pull Request -
State: closed - Opened by Anthchirp almost 3 years ago
#155 - Handle special autoPROC.xml files
Pull Request -
State: closed - Opened by KarlLevik almost 3 years ago
- 1 comment
#154 - trouble parsing some autoPROC.xml files
Issue -
State: closed - Opened by dsclassen about 3 years ago
- 1 comment
#153 - Add a Zocalo (Workflows) ISPyB service
Pull Request -
State: closed - Opened by Anthchirp about 3 years ago
- 1 comment
#152 - Update sqlalchemy models to ispyb v1.21.1
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#151 - Add tests for new EM particle picker calls
Issue -
State: open - Opened by Anthchirp about 3 years ago
- 1 comment
#150 - Add insert methods for new cryo EM tables.
Pull Request -
State: closed - Opened by HorstmannA about 3 years ago
- 1 comment
#149 - Optionally log SQLAlchemy query times
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#148 - If no sweeps are specified or inferred when creating a new processing job then continue without any rather than exiting
Pull Request -
State: closed - Opened by d-j-hatton about 3 years ago
#147 - Adapt insert_motion_correction() to take parameters like insert_ctf().
Pull Request -
State: closed - Opened by HorstmannA about 3 years ago
- 2 comments
#146 - Ensure ispyb.job test uses correct credentials
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#145 - Update sqlalchemy models to ispyb v1.20.0
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#144 - last_data_collections_on: new session for each query
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#143 - Add back_populates to relationships
Pull Request -
State: closed - Opened by rjgildea about 3 years ago
#142 - Add pre-commit hook to sort imports with isort
Pull Request -
State: closed - Opened by Anthchirp about 3 years ago
#141 - Add 'ispyb.job' to create/edit/view processing jobs
Pull Request -
State: closed - Opened by Anthchirp about 3 years ago
- 3 comments
#140 - Prepare deprecation of the sqlalchemy.session() function
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
- 1 comment
#139 - New ispyb.sqlalchemy.create_engine()
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 2 comments
#138 - ispyb.open(): support ISPYB_CREDENTIALS envvar
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
#137 - Make sp params definitions consistent
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 1 comment
#136 - Add a debug facility to the sqlalchemy interface
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#135 - Backwards compatibility for ispyb-database < 1.19.0
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 2 comments
#134 - Update SQLAlchemy ORM models to ispyb-database v1.19.0
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
#133 - Change package to /src layout
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
- 1 comment
#132 - Enable use_pure option of mysqlconnector
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 1 comment
#131 - Convert package to src/ layout
Issue -
State: closed - Opened by Anthchirp over 3 years ago
#130 - Remove deprecated features for 6.0 release
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
- 1 comment
#129 - Support Python 3.9
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#128 - Use marshmallow for model serialization schema
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 2 comments
#127 - Fix code convention issues
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#126 - Drop Python 2 compatibility constructs
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#125 - Add SQLAlchemy interface to documentation
Issue -
State: closed - Opened by rjgildea over 3 years ago
#124 - sqlalchemy review commits
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#123 - Add SQLAlchemy ORM models
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 5 comments
#122 - update fluo apis with table changes
Pull Request -
State: closed - Opened by stufisher over 3 years ago
- 6 comments
#121 - Associate GridInfo with dc instead of dcg
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
#120 - Add a beamlinesetup model
Issue -
State: closed - Opened by Anthchirp over 3 years ago
#118 - Drop support for Python 2.7 and 3.5
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
- 1 comment
#117 - Use Azure instead of Travis
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
#116 - Fix broken database queries
Pull Request -
State: closed - Opened by Anthchirp over 3 years ago
- 3 comments
#115 - Robustness to incorrect types; numpy.int64 cannot be converted
Issue -
State: open - Opened by ndevenish over 3 years ago
- 1 comment
#114 - New method to insert a subsample for a given sample image full path
Pull Request -
State: closed - Opened by KarlLevik over 3 years ago
- 1 comment
#113 - Need to update gridinfo sps to take dcid rather than dcgid
Issue -
State: open - Opened by stufisher over 3 years ago
#112 - Check importanceRank along with program attachments
Pull Request -
State: closed - Opened by rjgildea over 3 years ago
- 1 comment