Ecosyste.ms: Issues
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GitHub / DeepRank/DeepRank-Mut issues and pull requests
#33 - testing DeepRank-Mut
Issue -
State: open - Opened by imerelli 10 months ago
- 54 comments
#32 - Update README.md for archiving the repository
Pull Request -
State: closed - Opened by gcroci2 10 months ago
- 2 comments
#31 - Fix atomic contacts 1
Pull Request -
State: closed - Opened by rgayatri over 1 year ago
#30 - add softmax to the final output
Pull Request -
State: open - Opened by rgayatri almost 2 years ago
- 1 comment
#29 - Adds new features, based on amino acid swaps
Pull Request -
State: open - Opened by cbaakman almost 2 years ago
- 1 comment
#28 - Add a 3rd output class, labeled UNKNOWN.
Pull Request -
State: open - Opened by cbaakman almost 2 years ago
- 1 comment
#27 - Adds a b_factor feature
Pull Request -
State: closed - Opened by cbaakman about 2 years ago
- 1 comment
#26 - Add secondary structure features from dssp files.
Pull Request -
State: closed - Opened by cbaakman about 2 years ago
- 1 comment
#25 - adds the gnomAD module to the preprocessing
Pull Request -
State: closed - Opened by cbaakman about 2 years ago
- 1 comment
#24 - Add dbNSFP option
Pull Request -
State: closed - Opened by cbaakman about 2 years ago
- 1 comment
#23 - A fix for ROC output
Pull Request -
State: closed - Opened by cbaakman about 2 years ago
- 1 comment
#22 - Add DNA atoms to forcefield if possible
Issue -
State: open - Opened by rgayatri over 2 years ago
#21 - Mprof chunks
Pull Request -
State: closed - Opened by rgayatri over 2 years ago
- 1 comment
#20 - Conservation features with augmented grid fix
Pull Request -
State: closed - Opened by cbaakman over 2 years ago
- 3 comments
#19 - A fix for abnormal augmented grid features
Pull Request -
State: closed - Opened by cbaakman over 2 years ago
- 1 comment
#18 - makes an mcc plot
Pull Request -
State: closed - Opened by cbaakman over 2 years ago
- 1 comment
#17 - Links the variants to epoch data
Pull Request -
State: closed - Opened by cbaakman over 2 years ago
- 1 comment
#16 - how to handle missing values
Issue -
State: open - Opened by cbaakman almost 3 years ago
- 1 comment
Labels: enhancement
#15 - Prevent atom alternative locations from ending up in the dataset
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 4 comments
#14 - NaN mapped to the feature grid
Issue -
State: closed - Opened by cbaakman almost 3 years ago
- 3 comments
Labels: bug
#13 - Makes the error messages better usable for bug tracking
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 1 comment
#11 - Non X-ray structures slowdown the preprocessing step
Issue -
State: closed - Opened by rgayatri almost 3 years ago
- 1 comment
#10 - RuntimeWarning in preprocessing step
Issue -
State: open - Opened by rgayatri almost 3 years ago
- 1 comment
Labels: bug
#9 - Adaptation to use X-ray structures only
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
#8 - fix for atoms that are not in the forcefield
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
#7 - Increase efficiency by adding torch implementation
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 1 comment
#6 - top 20 checks
Pull Request -
State: closed - Opened by rgayatri almost 3 years ago
- 3 comments
#5 - Smaller datasets
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 1 comment
#4 - Adapt to the new table format
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 1 comment
#3 - Preprocess conservation data from the latest bioprodict dataset format
Pull Request -
State: closed - Opened by cbaakman almost 3 years ago
- 1 comment
#2 - Merge master-efro to main
Pull Request -
State: closed - Opened by rgayatri about 3 years ago
#1 - add distibuted data parallelism to training
Pull Request -
State: closed - Opened by ragna-van-horck about 3 years ago
- 1 comment