Ecosyste.ms: Issues

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GitHub / DaliangNing/iCAMP1 issues and pull requests

#65 - What is the term dij in equation (9)?

Issue - State: open - Opened by ZeweiSong 3 months ago - 1 comment

#63 - icamp.big debug problem

Issue - State: open - Opened by sssbishop 4 months ago - 2 comments

#62 - Optimizing Binning: MeanR vs. RAsig.adj?

Issue - State: open - Opened by gus-pendleton 4 months ago - 1 comment

#61 - Extremely fast phylogenetic distance computation

Issue - State: open - Opened by jianshu93 4 months ago - 1 comment

#60 - Interpretation questions

Issue - State: open - Opened by Hewang11111 5 months ago - 1 comment

#59 - How to build a bin level phylogenetic tree

Issue - State: open - Opened by xcljnu 6 months ago - 1 comment

#56 - I couldn't the find the function 'big.mantel.correlog'

Issue - State: closed - Opened by devarajarun 8 months ago - 1 comment

#55 - requirement of the sample number

Issue - State: closed - Opened by Gu2uMo 8 months ago - 2 comments

#54 - Protocols for using HPC?

Issue - State: closed - Opened by cckeneally 9 months ago - 3 comments

#52 - icamp.bins - arguments imply differing number of rows

Issue - State: closed - Opened by mgabriell1 9 months ago - 2 comments

#51 - Stuck at phylogentic signal testing

Issue - State: open - Opened by jonaskohh 9 months ago - 2 comments

#50 - How to get the category information?

Issue - State: closed - Opened by XELong 9 months ago - 2 comments

#49 - Is it necessary to rarify the count data before starting iCAMP analysis ?

Issue - State: closed - Opened by sankadinesh 11 months ago - 5 comments

#48 - Error in checkForRemoteErrors(val)

Issue - State: closed - Opened by chenyj8 12 months ago - 3 comments

#47 - Error in UseMethod("is.rooted")

Issue - State: closed - Opened by makerer5 12 months ago - 3 comments

#46 - The issue with step"binps=iCAMP::ps.bin"

Issue - State: closed - Opened by linxuanhuogatech about 1 year ago - 2 comments

#45 - Hi, professor Ning, I would like to ask you about the operation of iCAMP code

Issue - State: closed - Opened by Jia2023888 about 1 year ago - 2 comments

#44 - Hi, Daliang

Issue - State: closed - Opened by DUANZIHAOO about 1 year ago - 2 comments

#43 - Question about results of QPEN

Issue - State: closed - Opened by qingyu-wi about 1 year ago - 2 comments

#41 - Error in serialize(data, node$con) : ignoring SIGPIPE signal

Issue - State: closed - Opened by hahamark-learn over 1 year ago - 5 comments

#40 - How to evaluate the different results resulting from different methods

Issue - State: closed - Opened by diego00012138 over 1 year ago - 4 comments

#39 - Process in "D" state on NFS filesystem in a HPC environment

Issue - State: closed - Opened by melop over 1 year ago - 2 comments

#38 - Error in GetElements.bm(x, i, j): Illegal row index usage in extraction

Issue - State: closed - Opened by huizhen-yan over 1 year ago - 3 comments

#37 - Dealing with dataset with four metacommunities

Issue - State: closed - Opened by adityabandla over 1 year ago - 2 comments

#36 - Some confusions in using iCAMP

Issue - State: closed - Opened by leozhangya over 1 year ago - 2 comments

#34 - Can't find the help documents

Issue - State: closed - Opened by Joshcole2504 over 1 year ago - 1 comment

#33 - Error in oldname[j, 1:2] : subscript out of bounds

Issue - State: closed - Opened by Xiaojie0607 almost 2 years ago - 7 comments

#32 - Metagenomic data could be used for iCAMP?

Issue - State: closed - Opened by LiZhihua1982 almost 2 years ago - 1 comment

#31 - X nodes produced errors; first error: 'size'参数不对

Issue - State: closed - Opened by Zhenghong-Wang almost 2 years ago - 8 comments

#30 - issue with icamp.big

Issue - State: closed - Opened by phillwatts73 almost 2 years ago - 1 comment

#29 - missing values are not allowed with argument 'na.rm = FALSE'

Issue - State: closed - Opened by liyangyang200112 almost 2 years ago - 4 comments

#28 - Solution to large dataset?

Issue - State: closed - Opened by chenyj8 almost 2 years ago - 3 comments

#27 - Error in h(simpleError(msg, call)) : when running icamp.big

Issue - State: closed - Opened by LuffyLuffy about 2 years ago - 6 comments

#26 - Results of bin.size.limit parameters to12 and 72 were same

Issue - State: closed - Opened by YuZhang-learner over 2 years ago - 12 comments

#24 - an issue in bNTI.big.r

Issue - State: closed - Opened by ChiLiubio over 2 years ago - 1 comment

#23 - unsolved problem

Issue - State: closed - Opened by WeichuanLin6688 over 2 years ago - 5 comments

#22 - Error in oldname[j, 1:2] : subscript out of bounds

Issue - State: closed - Opened by INFINITY1993 almost 3 years ago - 5 comments

#21 - Out of memory?

Issue - State: closed - Opened by nicholascdove almost 3 years ago - 9 comments

#20 - Some questions about OTUs in each group

Issue - State: closed - Opened by zhangy-zy775 almost 3 years ago - 2 comments

#19 - Mismatch in values between vegdist Bray distances and RC.pc CB.obs

Issue - State: closed - Opened by MagdaGarbowski almost 3 years ago - 2 comments

#18 - Error occured while runwhile bNRI.bin.big

Issue - State: closed - Opened by PicaPicaLX about 3 years ago - 5 comments

#17 - core, rare and other taxa

Issue - State: closed - Opened by pedres about 3 years ago - 2 comments

#16 - OpenBLAS blas_thread_init: pthread_create failed for thread in betaMPD calculation

Issue - State: closed - Opened by heavennew about 3 years ago - 4 comments

#15 - abundance weighted bMNTD & bNTI

Issue - State: closed - Opened by adityabandla about 3 years ago - 2 comments

#13 - ITS data?

Issue - State: closed - Opened by chenyj8 over 3 years ago - 4 comments

#12 - Potentially incorrect column names in icamp.cate

Issue - State: closed - Opened by zhenjiaofenjie over 3 years ago - 2 comments

#11 - Error in com.bin[[i]]: attempt to select less than one element in integerOneIndex

Issue - State: closed - Opened by Kaoping over 3 years ago - 8 comments

#10 - Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent

Issue - State: closed - Opened by pyspider over 3 years ago - 11 comments

#9 - Error while computing bNRI for strict bins

Issue - State: closed - Opened by adityabandla over 3 years ago - 3 comments

#8 - choice of phylogenetic metric

Issue - State: closed - Opened by adityabandla over 3 years ago - 1 comment

#7 - Error in 1:ncol(bMNTD.randm) : argument of length 0

Issue - State: closed - Opened by pyspider over 3 years ago - 5 comments

#6 - Correlate bin-level processes with environmental variates

Issue - State: closed - Opened by adityabandla over 3 years ago - 6 comments

#5 - Other data transformations prior to beta diversity calculations

Issue - State: closed - Opened by adityabandla almost 4 years ago - 6 comments

#4 - Issue with Cluster on R4.03 MacOS Big Sur

Issue - State: closed - Opened by bholt20 almost 4 years ago - 6 comments

#3 - Values for ds and bin.size.limit

Issue - State: closed - Opened by adityabandla almost 4 years ago - 3 comments

#2 - "Invalide 'size' argument" using the RC.pc function

Issue - State: closed - Opened by Benjamingroult almost 4 years ago - 8 comments

#1 - Failing to match OTU IDs

Issue - State: closed - Opened by nejcstopno almost 4 years ago - 1 comment