Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / CuriBio/pulse3d issues and pull requests

#169 - handle errors creating well group agg metrics

Pull Request - State: closed - Opened by tannermpeterson 11 months ago

#168 - remove scheduled actions

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#167 - Structlog addition

Pull Request - State: closed - Opened by luciipak over 1 year ago

#166 - User defined metadata

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#165 - Update labels for calcium and voltage data

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#164 - Bump actions/checkout from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, github_actions

#163 - Trim start after mfa fix

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#162 - trim data from start after running magnet finding alg

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#161 - Fix width metrics

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#160 - fix ma mini barcode mapping; peak finding fix

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#159 - add max freq to default peak finding params

Pull Request - State: closed - Opened by luciipak over 1 year ago

#158 - throw error when no peaks detected

Pull Request - State: closed - Opened by NikitaPoly over 1 year ago - 1 comment

#157 - mini barcode handling

Pull Request - State: closed - Opened by luciipak over 1 year ago

#156 - Remove requests

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#155 - bump mfa commit

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#154 - Remove stim barcode if no stim data

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#153 - Allow larger plate recordings

Pull Request - State: closed - Opened by luciipak over 1 year ago

#152 - Perf boost

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#151 - Updates to excel_writer

Pull Request - State: closed - Opened by luciipak over 1 year ago

#150 - add custom peak finding params to metadata sheet

Pull Request - State: closed - Opened by luciipak over 1 year ago

#149 - Stim loop handling

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#148 - Fix loading from DF and loading zipped folder of xlsx

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#147 - correct use of baseline width in twitch velocity

Pull Request - State: closed - Opened by luciipak over 1 year ago

#146 - support python 3.11

Pull Request - State: closed - Opened by tannermpeterson over 1 year ago

#145 - Stim overlay + UnableToConvergeError

Pull Request - State: closed - Opened by luciipak almost 2 years ago

#144 - Support time window in noise-based peak finding

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#143 - Noise based peak finding

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#142 - Release 0.33.1

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#141 - fix to_dataframe output

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#140 - Use of baseline widths in Twitch Amp, Twitch AUC, Twitch Velocities

Pull Request - State: closed - Opened by luciipak almost 2 years ago

#139 - Add handling for multiple xlsx files in zip

Pull Request - State: closed - Opened by luciipak almost 2 years ago

#138 - Correctly set snapshot x bounds

Pull Request - State: closed - Opened by luciipak almost 2 years ago

#137 - Re-add override to default magnet finding alg positions

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#136 - Dropna for stim data

Pull Request - State: closed - Opened by NikitaPoly almost 2 years ago

#135 - fixed metadata bug

Pull Request - State: closed - Opened by NikitaPoly almost 2 years ago - 2 comments

#134 - From df xlsx bug

Pull Request - State: closed - Opened by NikitaPoly almost 2 years ago

#133 - Initial position fix

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#132 - bump version, point to latest magnet finding algo

Pull Request - State: closed - Opened by jperson almost 2 years ago

#131 - Stim interpolation updates

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#129 - New magnet finding alg and pre-alg filtering by default

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#128 - Override H5 well groups

Pull Request - State: closed - Opened by luciipak almost 2 years ago

#127 - Windowed peak finding fix

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#126 - Update metrics definition image

Pull Request - State: closed - Opened by tannermpeterson almost 2 years ago

#124 - add python3.10 to workflows

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#123 - fix changelog

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#122 - Well grouping

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#121 - Fix amplitude calc

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#120 - changelog switch

Pull Request - State: closed - Opened by NikitaPoly about 2 years ago

#119 - changed calculation for twitch amplitudes

Pull Request - State: closed - Opened by NikitaPoly about 2 years ago

#118 - update pd.DataFrame.concat

Pull Request - State: closed - Opened by luciipak about 2 years ago

#117 - Revert concat formatting issue

Pull Request - State: closed - Opened by luciipak about 2 years ago

#116 - Interpolated Stim Waveforms

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#115 - Bump actions/download-artifact from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] about 2 years ago - 1 comment
Labels: dependencies, github_actions

#114 - handle CI warnings

Pull Request - State: closed - Opened by luciipak about 2 years ago

#113 - Fix DF methods

Pull Request - State: closed - Opened by luciipak about 2 years ago

#112 - reduce min num twitches needed for analysis to 1

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#111 - added option for stim protocols in output

Pull Request - State: closed - Opened by NikitaPoly about 2 years ago

#110 - New Magnet Finding Alg and other refactors

Pull Request - State: closed - Opened by tannermpeterson about 2 years ago

#109 - added stim lid barcode to output file

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago - 1 comment

#108 - Beta 1 waveform flip

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#107 - Fix Post Stiffness in metadata sheet

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#106 - added pulse version to output prefix

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#105 - Metadata updates

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#104 - Energy label change

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#103 - add sorting back to twitch_width_percents at top level

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#102 - added sorting to list of %

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#101 - New alg for v1 + fix for loading calibration files

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#100 - added kwargs to PlateRecording.from_directory

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#99 - Barcode stiffness

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#98 - Disable y normalization

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago - 1 comment

#97 - fixed graphing bug

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#96 - Multiple optical files

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago - 1 comment

#95 - Multiple optical files

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#94 - changes for interactive analysis

Pull Request - State: closed - Opened by luciipak over 2 years ago

#93 - adding docs back

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#92 - Fixed resolution on diagram image

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#91 - Twitch widths velocity auc

Pull Request - State: closed - Opened by jperson over 2 years ago

#90 - added baseline_widths_to_use to docs

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#89 - Option for maximum y-axis

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#88 - add method to generate dataframe from platerecording

Pull Request - State: closed - Opened by jperson over 2 years ago

#87 - test

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#86 - removed invalid examples

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#85 - PlateRecording start and end time params

Pull Request - State: closed - Opened by luciipak over 2 years ago

#84 - added prominence/width parameters to docs

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago - 3 comments

#83 - Added width and prominence factor to write exel api

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#82 - added the params

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago - 1 comment

#81 - Fix twitch width constraint

Pull Request - State: closed - Opened by luciipak over 2 years ago

#80 - added create_tag back to publish workflow

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#79 - seconds array set to always start at 0

Pull Request - State: closed - Opened by NikitaPoly over 2 years ago

#78 - Baseline metric update

Pull Request - State: closed - Opened by luciipak over 2 years ago

#77 - Bump actions/setup-python from 2 to 4.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, github_actions

#76 - fixed time force format used to write output file

Pull Request - State: closed - Opened by luciipak over 2 years ago

#75 - Load raw data to PlateRecording

Pull Request - State: closed - Opened by luciipak over 2 years ago

#74 - removed return from test

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#73 - Minor fixes

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#72 - V1 compatibility

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago

#71 - Bump actions/setup-python from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, github_actions

#70 - return output file name from write_xlsx

Pull Request - State: closed - Opened by tannermpeterson over 2 years ago