Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / Clinical-Genomics/statina issues and pull requests

#238 - fix(Docker) Change container base image

Pull Request - State: closed - Opened by Vince-janv about 1 year ago - 1 comment

#237 - (Pydantic) Fix pydantic version

Pull Request - State: closed - Opened by Vince-janv over 1 year ago - 2 comments

#236 - Pydantic causing errors in github actions

Issue - State: open - Opened by pbiology over 1 year ago - 1 comment

#235 - Update CODEOWNERS

Pull Request - State: closed - Opened by pbiology over 1 year ago - 1 comment

#234 - fix(warnings) Show warnings if values are equal to thresholds

Pull Request - State: closed - Opened by Vince-janv almost 2 years ago - 1 comment

#233 - FFXXX-threshold value

Issue - State: closed - Opened by alieden almost 2 years ago - 1 comment
Labels: Low prio

#232 - Change in automatic log out settings

Issue - State: open - Opened by alieden almost 2 years ago
Labels: Low prio

#231 - Separate thresholds for T13/T18/T21

Issue - State: open - Opened by alieden almost 2 years ago
Labels: Medium prio, refinement needed

#230 - Filter ffx datasets

Pull Request - State: closed - Opened by Mropat over 2 years ago

#229 - Exclude other datasets

Pull Request - State: closed - Opened by Mropat over 2 years ago

#228 - Pick default dataset

Issue - State: open - Opened by Mropat over 2 years ago

#227 - Hide scatter data from other datasets in FFX/Y plot

Issue - State: closed - Opened by Mropat over 2 years ago

#226 - Datasets

Pull Request - State: closed - Opened by Mropat over 2 years ago

#225 - Update CODEOWNERS

Pull Request - State: closed - Opened by mayabrandi over 2 years ago

#224 - Altered PREFACE values in the automation data set

Issue - State: closed - Opened by alieden over 2 years ago
Labels: High prio

#223 - Deprecate statina v1 in preparation for dataset feature

Pull Request - State: closed - Opened by Mropat over 2 years ago

#222 - Add new dataset collection

Issue - State: closed - Opened by Mropat over 2 years ago
Labels: Effort high, backend

#221 - Update regarding FFY vs FFX data

Issue - State: open - Opened by alieden over 2 years ago - 7 comments
Labels: High prio, discuss

#220 - Batch download file renamed

Pull Request - State: closed - Opened by Mropat over 2 years ago

#219 - Avoid indicating outlier values, incidental findings in the Ratio (Chr1-22) tab

Issue - State: open - Opened by alieden over 2 years ago
Labels: Medium prio

#218 - Date run is fixed in QC-data?

Issue - State: closed - Opened by alieden over 2 years ago - 1 comment
Labels: Low prio

#217 - Suspected T18 sample not flagged (Warning) correctly

Issue - State: closed - Opened by alieden over 2 years ago - 10 comments
Labels: bug, High prio

#216 - Use transactions when modifying multiple documents

Issue - State: open - Opened by Mropat almost 3 years ago

#215 - Certain symbols not allowed in Comment-field?

Issue - State: closed - Opened by NIPT-LabTech almost 3 years ago - 3 comments
Labels: frontend

#214 - Full batch archive should only include latest bundle

Issue - State: closed - Opened by moahaegglund almost 3 years ago - 3 comments
Labels: backend

#212 - Highlight outliers for GC_Dropout

Issue - State: closed - Opened by alieden almost 3 years ago - 2 comments
Labels: High prio

#211 - Statina down - HIGH PRIORITY

Issue - State: closed - Opened by alieden almost 3 years ago - 6 comments
Labels: High prio

#210 - Redirect v2 migration test

Pull Request - State: closed - Opened by Mropat almost 3 years ago

#209 - rollback

Pull Request - State: closed - Opened by mayabrandi almost 3 years ago

#208 - use different import

Pull Request - State: closed - Opened by Mropat almost 3 years ago

#207 - Incorrect sex called - High priority

Issue - State: closed - Opened by alieden almost 3 years ago - 3 comments

#205 - No highlight color in report - low priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment
Labels: frontend

#204 - change name of full batch archive - low priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment
Labels: backend

#203 - Unable to include sample - High priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment

#202 - update verify url

Pull Request - State: closed - Opened by Mropat almost 3 years ago

#201 - Changed label - low priority

Issue - State: closed - Opened by alieden almost 3 years ago
Labels: frontend

#200 - new thresholds - WIP

Pull Request - State: closed - Opened by mayabrandi almost 3 years ago

#199 - Locked header row in summary table - medium/high priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment
Labels: frontend

#198 - nr_batches variable

Pull Request - State: closed - Opened by mayabrandi almost 3 years ago

#197 - Error in search results - minoe

Issue - State: closed - Opened by alieden almost 3 years ago - 5 comments
Labels: frontend

#196 - Add column to fluffy

Issue - State: open - Opened by J35P312 almost 3 years ago
Labels: Effort low, backend, Low prio

#195 - fixed Y-axis in Zscore graph? - High priority

Issue - State: closed - Opened by alieden almost 3 years ago - 2 comments

#194 - Incorrect labels in sample page - low priority

Issue - State: open - Opened by alieden almost 3 years ago - 2 comments
Labels: frontend, discuss

#193 - Change in Classification - low priority

Issue - State: closed - Opened by alieden almost 3 years ago
Labels: wontfix, backend, Low prio

#192 - Update index.html

Pull Request - State: closed - Opened by elevu almost 3 years ago

#191 - Report format - Medium priorty

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment

#190 - Presentation of sample names in Zscore 13/18/21 graphs - medium priorty

Issue - State: closed - Opened by alieden almost 3 years ago - 7 comments
Labels: frontend, Low prio

#189 - Alterations in presentation of legacy data - medium priority

Issue - State: open - Opened by alieden almost 3 years ago - 5 comments
Labels: frontend, discuss

#188 - Alterations in symbols used in the FFX vs FFY figure - low priority

Issue - State: open - Opened by alieden almost 3 years ago
Labels: frontend, Low prio

#187 - Alterations in headings - High Priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment

#186 - Fit all samples i the same "window" - High Priority

Issue - State: closed - Opened by alieden almost 3 years ago - 1 comment

#185 - Lines in summary table - medium priority

Issue - State: closed - Opened by alieden almost 3 years ago - 4 comments

#184 - zipfile include older versions of batch

Pull Request - State: closed - Opened by Mropat almost 3 years ago - 1 comment

#182 - Batch archive zip to include all versions of batch

Issue - State: closed - Opened by Mropat almost 3 years ago

#181 - Deny upload of duplicate sampleID

Issue - State: closed - Opened by Mropat almost 3 years ago - 1 comment
Labels: backend, High prio

#180 - Rename sort directon to shortened version

Pull Request - State: closed - Opened by Mropat almost 3 years ago - 1 comment

#179 - Congruent error message structure

Issue - State: closed - Opened by elevu almost 3 years ago
Labels: backend

#178 - Change naming for ascending and descending

Issue - State: closed - Opened by elevu almost 3 years ago

#177 - Add statina banner (minor)

Pull Request - State: closed - Opened by elevu almost 3 years ago - 2 comments

#176 - Adjusting red flag and warning for Z-score in relation to FFY and/or FFPF (high priority)

Issue - State: closed - Opened by alieden almost 3 years ago - 18 comments
Labels: backend, High prio

#175 - Fix batch delete

Pull Request - State: closed - Opened by Mropat almost 3 years ago

#174 - Not possible to save sample info in batch 2119420_3_NIPT (medium priority)

Issue - State: closed - Opened by alieden about 3 years ago - 8 comments
Labels: backend

#173 - Allow Content-Disposition

Pull Request - State: closed - Opened by Mropat about 3 years ago - 2 comments

#172 - Add content-disposition to Access-Control-Expose-Headers

Issue - State: closed - Opened by elevu about 3 years ago
Labels: Decoupled Frontend

#171 - sample table download

Issue - State: open - Opened by mayabrandi about 3 years ago - 1 comment
Labels: backend, frontend, Low prio, High prio

#170 - Thresholds defined by user.

Issue - State: closed - Opened by mayabrandi about 3 years ago
Labels: backend, Low prio

#169 - Fix filenames download

Pull Request - State: closed - Opened by Mropat about 3 years ago

#168 - Batch download requires no file name

Pull Request - State: closed - Opened by Mropat about 3 years ago

#167 - rounding to two decimals

Pull Request - State: closed - Opened by mayabrandi about 3 years ago

#166 - validated samples for coverage plot function

Pull Request - State: closed - Opened by mayabrandi about 3 years ago

#165 - fix report bug

Pull Request - State: closed - Opened by mayabrandi about 3 years ago

#164 - Set Include to optional

Pull Request - State: closed - Opened by Mropat about 3 years ago

#163 - Bug fixes

Pull Request - State: closed - Opened by mayabrandi about 3 years ago - 1 comment

#162 - Sample status

Pull Request - State: closed - Opened by mayabrandi about 3 years ago

#161 - wip

Pull Request - State: closed - Opened by mayabrandi about 3 years ago

#160 - Implement refresh token

Issue - State: closed - Opened by Mropat about 3 years ago - 1 comment
Labels: backend

#159 - Resend email

Issue - State: open - Opened by Mropat about 3 years ago
Labels: backend, Low prio

#158 - Add role to /token

Issue - State: closed - Opened by elevu about 3 years ago - 1 comment

#157 - Reset password

Issue - State: open - Opened by Mropat about 3 years ago
Labels: backend, Low prio

#156 - Sanitize text search query against regex injections

Issue - State: open - Opened by Mropat about 3 years ago
Labels: backend, Low prio

#155 - Sample query batch fix

Pull Request - State: closed - Opened by Mropat about 3 years ago

#154 - batch id in samples query

Pull Request - State: closed - Opened by Mropat about 3 years ago

#152 - Refactoring: edit sample status

Issue - State: closed - Opened by elevu about 3 years ago - 1 comment

#151 - Search batches with text

Pull Request - State: closed - Opened by Mropat about 3 years ago

#150 - Enable search queries

Issue - State: closed - Opened by Mropat about 3 years ago

#149 - Order of samples in the NIPT viewer (medium priority)

Issue - State: closed - Opened by alieden about 3 years ago - 2 comments

#141 - Viewing QC-data for older batches (medium priority=

Issue - State: closed - Opened by alieden about 3 years ago - 2 comments
Labels: Effort low, backend, frontend, Low prio

#134 - Endpoints for graphs

Issue - State: closed - Opened by elevu about 3 years ago - 1 comment
Labels: Decoupled Frontend

#129 - Allow CORS

Issue - State: closed - Opened by elevu about 3 years ago - 1 comment
Labels: Decoupled Frontend

#124 - collide internal and external app with with new nginx

Issue - State: closed - Opened by mayabrandi over 3 years ago - 1 comment

#117 - High Priority - Missing and incorrect Stdev values shown in statina

Issue - State: closed - Opened by alieden over 3 years ago - 1 comment

#113 - Low priority - Automatic log out

Issue - State: closed - Opened by alieden over 3 years ago - 1 comment
Labels: Effort high, backend

#111 - Low priority - Last change info not updated

Issue - State: open - Opened by alieden over 3 years ago
Labels: Effort low, backend, Low prio

#109 - Low priority - poor separation between sample list and axis label FFX

Issue - State: closed - Opened by alieden over 3 years ago - 1 comment

#108 - Medium priority - locked header row in report?

Issue - State: closed - Opened by alieden over 3 years ago

#101 - Create email address confirmation endpoint

Issue - State: closed - Opened by Mropat over 3 years ago

#84 - Low priority - Order of batches in QC

Issue - State: closed - Opened by alieden over 3 years ago

#82 - Low priority - change spelling

Issue - State: closed - Opened by alieden over 3 years ago - 3 comments