Clinical-Genomics/fluffy issues and pull requests

#40 - 3.2.0

Pull Request - State: closed - Opened by J35P312 over 1 year ago - 1 comment

#39 - fix bamsormadup_cmd

Pull Request - State: closed - Opened by karlnyr over 2 years ago - 5 comments

#38 - Added multi threading for bwa Aln and samtools sort

Pull Request - State: closed - Opened by karlnyr over 2 years ago - 3 comments

#37 - Feat/add tmp dir bwa aln

Pull Request - State: closed - Opened by karlnyr over 2 years ago - 2 comments

#36 - fluffy 3.0.0

Pull Request - State: closed - Opened by J35P312 over 2 years ago

#35 - The Fluffy Manifesto

Pull Request - State: closed - Opened by J35P312 almost 3 years ago

#34 - Fluffy 2.0.0

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 4 comments

#33 - Fluffy 1.3.0!!!11

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 2 comments

#32 - Support Dragen demux

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 1 comment

#31 - Adjustable slope and intercept in the FFY model (Fluffy 1.0.0!)

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 1 comment

#30 - improved error handling in filter_csv

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 1 comment

#29 - updated pip file and pip.lock

Pull Request - State: closed - Opened by J35P312 almost 3 years ago

#28 - Update requirements.txt

Pull Request - State: closed - Opened by J35P312 almost 3 years ago

#27 - 0.8.1

Pull Request - State: closed - Opened by J35P312 almost 3 years ago - 1 comment

#26 - 0.8.0

Pull Request - State: closed - Opened by J35P312 about 3 years ago

#25 - Final fixes before taken into production

Pull Request - State: closed - Opened by J35P312 about 3 years ago - 1 comment

#24 - Rename summary.csv

Pull Request - State: closed - Opened by J35P312 about 3 years ago - 1 comment

#23 - Hi I have added TMPDIR option to picardtools

Pull Request - State: closed - Opened by J35P312 about 3 years ago - 1 comment

#22 - improved readme and internal reference mode

Pull Request - State: closed - Opened by J35P312 about 3 years ago

#21 - Fluffy 0.5.0

Pull Request - State: closed - Opened by J35P312 over 3 years ago

#20 - Add COMPLETE and FAIL finnish flag

Pull Request - State: closed - Opened by J35P312 over 3 years ago

#19 - Fluffy 0.4.6

Pull Request - State: closed - Opened by J35P312 over 3 years ago

#18 - Singularity bind

Pull Request - State: closed - Opened by J35P312 over 3 years ago - 1 comment

#17 - added init.py file

Pull Request - State: closed - Opened by J35P312 over 3 years ago - 1 comment

#16 - changes to the deliverables file

Pull Request - State: closed - Opened by J35P312 over 3 years ago

#15 - Release on PYPI with gh action

Pull Request - State: closed - Opened by moonso over 3 years ago

#14 - update csv header

Pull Request - State: closed - Opened by J35P312 over 3 years ago - 1 comment

#13 - FLuffy fail failed sucessfully

Pull Request - State: closed - Opened by J35P312 over 3 years ago - 2 comments

#12 - MultiQC and FastqC

Pull Request - State: closed - Opened by J35P312 over 3 years ago - 3 comments

#11 - 0.2.0

Pull Request - State: closed - Opened by J35P312 almost 4 years ago - 2 comments

#10 - First oficial release!

Pull Request - State: closed - Opened by J35P312 about 4 years ago - 3 comments

#9 - added the on finnish sact log

Pull Request - State: closed - Opened by J35P312 about 4 years ago - 3 comments

#8 - Fixes to the deliverables file and sbatch test

Pull Request - State: closed - Opened by J35P312 about 4 years ago - 4 comments

#7 - generate the deliverables yaml file

Pull Request - State: closed - Opened by J35P312 about 4 years ago - 2 comments

#6 - Customisible slurm settings

Pull Request - State: closed - Opened by J35P312 about 4 years ago

#5 - apply coverage

Pull Request - State: closed - Opened by moonso about 4 years ago

#4 - refactor slurm

Pull Request - State: closed - Opened by moonso about 4 years ago - 2 comments

#3 - Update readme file and create zip workflow

Pull Request - State: closed - Opened by J35P312 about 4 years ago

#2 - removal of bugs

Pull Request - State: closed - Opened by J35P312 about 4 years ago

#1 - refactor

Pull Request - State: closed - Opened by moonso over 4 years ago - 1 comment

GitHub / Clinical-Genomics/fluffy issues and pull requests