ChristopherMayes/Xopt issues and pull requests

#241 - Turbo refactor

Pull Request - State: closed - Opened by roussel-ryan 3 months ago

#240 - Add exception handling for gradf failing in BO generators

Issue - State: closed - Opened by roussel-ryan 4 months ago - 1 comment

#239 - Allow for low noise prior specification via dict in standard model constructor

Issue - State: open - Opened by roussel-ryan 4 months ago

#238 - Created PID generator class and provided example code.

Pull Request - State: open - Opened by alexdennis312 4 months ago

#237 - Bax improvements

Pull Request - State: closed - Opened by roussel-ryan 4 months ago

#236 - Neldermead generator does not work with numpy 2.x

Issue - State: closed - Opened by wenatuhs 5 months ago - 2 comments

#235 - AsynchronousXopt.to_json() broken

Issue - State: open - Opened by ChristopherMayes 5 months ago
Labels: bug

#234 - Asynchronous Xopt does not make a dump file

Issue - State: open - Opened by ndwang 5 months ago - 2 comments

#233 - Bugfix for using numpy 2.0.0

Pull Request - State: closed - Opened by roussel-ryan 5 months ago

#232 - update requirements

Pull Request - State: closed - Opened by roussel-ryan 5 months ago

#231 - `X.random_evaluate()` broken with the `neldermead` example notebook.

Issue - State: open - Opened by ChristopherMayes 5 months ago - 7 comments

#230 - Custom objectives

Pull Request - State: closed - Opened by roussel-ryan 5 months ago - 2 comments

#229 - Error handling for vocs

Pull Request - State: closed - Opened by roussel-ryan 6 months ago

#228 - Bax visualizations

Pull Request - State: closed - Opened by dylanmkennedy 7 months ago

#227 - Error handling + test improvements

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#226 - Update index.md

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#225 - Include requirement botorch<=0.10.0 for compatibility with python 3.9

Pull Request - State: closed - Opened by dylanmkennedy 7 months ago

#224 - Set weights bugfix that creates improper behavior for bayesian exploration

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#223 - Model construction example

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#222 - add robustness and additional test to fixed features functionality in Bayesian generators

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#221 - Modularize visualization

Pull Request - State: closed - Opened by t-bz 7 months ago - 1 comment

#220 - RCDS uses to-be-deprecated scipy API

Issue - State: open - Opened by wenatuhs 7 months ago

#219 - fix a bug with type checking vocs constraints

Pull Request - State: closed - Opened by roussel-ryan 7 months ago

#218 - Botorch version should be updated in requirements to 0.9.3

Issue - State: closed - Opened by ansantam 7 months ago - 2 comments

#217 - TuRBO refuses to work if no evaluated points are feasible

Issue - State: closed - Opened by wenatuhs 8 months ago - 1 comment

#216 - Improve Visualization Error Message

Pull Request - State: closed - Opened by t-bz 8 months ago - 1 comment

#215 - Modularize model visualization

Issue - State: closed - Opened by t-bz 8 months ago

#214 - Raise useful error when too many variables are specified in visualize model

Issue - State: closed - Opened by roussel-ryan 8 months ago - 3 comments

#213 - Serialization issue with `dtypes` in `turbo_controller` configuration

Issue - State: open - Opened by wenatuhs 8 months ago

#212 - make random evaluate consistent with numpy standards

Pull Request - State: closed - Opened by roussel-ryan 8 months ago - 1 comment

#211 - `feasibility_data` method in VOCS object should be more strict on input data type

Issue - State: open - Opened by wenatuhs 8 months ago

#210 - add custom noise prior attribute to model constructor

Pull Request - State: closed - Opened by roussel-ryan 8 months ago - 1 comment

#209 - Need ability to specify explicit noise prior

Issue - State: closed - Opened by dylanmkennedy 8 months ago - 1 comment

#208 - Add evaluate function like random_evaluate() but with mesh grid of points instead.

Issue - State: open - Opened by dylanmkennedy 8 months ago

#207 - Xopt.random_evaluate() is passing arrays as variable values instead of just floats.

Issue - State: closed - Opened by ColwynGulliford 8 months ago - 3 comments

#206 - `Nelder-Mead`: Start from Last Evaluated Point?

Issue - State: open - Opened by ax3l 8 months ago

#205 - add returning best param set to vocs method,

Pull Request - State: closed - Opened by roussel-ryan 8 months ago

#204 - add test functions and set rasterize for colormaps

Pull Request - State: closed - Opened by roussel-ryan 8 months ago

#203 - Bug: show_acquisition flag not working for 2D models

Issue - State: closed - Opened by roussel-ryan 8 months ago

#202 - Feature Request: Discrete variable specification/optimization

Issue - State: open - Opened by roussel-ryan 9 months ago - 1 comment

#201 - Rename arguments in ones_callable() on line 21 of Xopt/generators/bayesian/custom_botorch/constrained_acquisition.py

Issue - State: closed - Opened by dylanmkennedy 9 months ago - 1 comment

#200 - Covariance modules not being properly serialized when dumping to YAML

Issue - State: open - Opened by dylanmkennedy 9 months ago

#199 - Improve validation for generators that only support observables.

Pull Request - State: closed - Opened by dylanmkennedy 9 months ago - 4 comments

#198 - Add warnings if specified modules are not added to the model

Pull Request - State: closed - Opened by t-bz 9 months ago - 1 comment

#197 - Raise warnings if modules are specified but not used

Issue - State: closed - Opened by t-bz 9 months ago - 2 comments

#196 - Fix constants not propagating in AsynchronousXopt

Pull Request - State: closed - Opened by ChristopherMayes 9 months ago

#195 - Constants not being passed into evaluate with AsynchronousXopt

Issue - State: open - Opened by ChristopherMayes 9 months ago
Labels: bug

#194 - I have been unable to run Xopt with Python 3.11. that has pydantic version 2.5.3

Issue - State: closed - Opened by petr-lanl 10 months ago - 3 comments

#193 - Fix indexing error for model visualization

Pull Request - State: closed - Opened by t-bz 10 months ago

#192 - move benchmarks to a separate folder

Pull Request - State: closed - Opened by roussel-ryan 10 months ago

#191 - Benchmarking not working using pytest

Issue - State: closed - Opened by roussel-ryan 10 months ago - 7 comments

#190 - Adds a flag to turn off aquisition function for visualization

Pull Request - State: closed - Opened by t-bz 10 months ago

#189 - implement the kernel from Hessian in botorch

Pull Request - State: closed - Opened by roussel-ryan 10 months ago

#188 - fix testing bug due to random sampling

Pull Request - State: closed - Opened by roussel-ryan 10 months ago

#187 - Resolving TypeError caused by using GPU and max_travel_distances in Generator

Pull Request - State: closed - Opened by kathryn-baker 10 months ago

#186 - updates to botorch requirements

Pull Request - State: closed - Opened by roussel-ryan 10 months ago

#185 - Xopt requires botorch version >=0.9.??

Issue - State: closed - Opened by dylanmkennedy 10 months ago - 1 comment

#184 - Update README.md

Pull Request - State: closed - Opened by roussel-ryan 10 months ago

#183 - Fix CNSGA population selection

Pull Request - State: closed - Opened by nikitakuklev 11 months ago

#182 - BLD: fix test requirements

Pull Request - State: closed - Opened by ken-lauer 11 months ago

#181 - make file cleanup unified to fix assert bug in line 117

Pull Request - State: closed - Opened by roussel-ryan 11 months ago

#180 - implement bugfix for adding constants + update tests

Pull Request - State: closed - Opened by roussel-ryan 11 months ago

#179 - xopt 2.0.1 does not take the constants settings for oprimization

Issue - State: closed - Opened by thuzz08 11 months ago - 5 comments

#178 - Adds remove_data and cumulative_optimum functions

Pull Request - State: closed - Opened by t-bz 12 months ago

#177 - Add log multi-objective acquisition functions and benchmarking script

Pull Request - State: closed - Opened by nikitakuklev 12 months ago - 1 comment

#176 - update requirements for latin hypercube generator

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#175 - Adding latin hypercube

Pull Request - State: closed - Opened by electronsandstuff about 1 year ago - 4 comments

#174 - Interpolated BO generators

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#173 - Add max time flag and update basic example

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#172 - Bugfixes and log acquisition function implementation

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#171 - Improve dataframe handling performance

Pull Request - State: closed - Opened by nikitakuklev about 1 year ago - 8 comments

#170 - Optional arguments

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#169 - Delete print statement for validation of GP constructor

Pull Request - State: closed - Opened by t-bz about 1 year ago

#168 - Vocs normalize inputs

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago - 1 comment

#167 - Improve simplex serialization

Pull Request - State: closed - Opened by nikitakuklev about 1 year ago - 2 comments

#166 - Inconsistency in the `Generator.generate()` returns

Issue - State: open - Opened by cr-xu about 1 year ago - 2 comments

#165 - bugfix for pandas indexing issue

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#164 - Docs touchup

Pull Request - State: closed - Opened by ChristopherMayes about 1 year ago

#163 - Ensure prior mean model is in eval mode

Pull Request - State: closed - Opened by t-bz about 1 year ago - 1 comment

#162 - add select_best function to vocs

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#161 - Update main index page in docs

Pull Request - State: closed - Opened by ChristopherMayes about 1 year ago

#160 - bugfix w test

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#159 - Using CSNGA without constraint

Issue - State: closed - Opened by cr-xu about 1 year ago - 2 comments

#158 - Guidelines for Xopt top level configuration

Issue - State: open - Opened by wenatuhs about 1 year ago

#157 - Improve model visualization options

Pull Request - State: closed - Opened by t-bz about 1 year ago

#156 - Initial CNSGA pop size is wrong in working example

Issue - State: open - Opened by ColwynGulliford about 1 year ago - 3 comments

#155 - add from_file helper function

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#154 - Init on str pointing to yaml file

Issue - State: closed - Opened by ColwynGulliford about 1 year ago - 2 comments

#153 - bugfix implementation and test

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago - 1 comment

#152 - Update gh-pages.yml

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#151 - enable xopt init from yaml file

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago - 4 comments

#150 - Init Xopt on YAML

Issue - State: closed - Opened by ChristopherMayes about 1 year ago

#149 - UCB and constraints

Pull Request - State: closed - Opened by t-bz about 1 year ago - 3 comments

#148 - Data refactor

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago - 3 comments

#147 - bugfixes

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#146 - Update README

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#145 - implement and test data saving + restart bugfix

Pull Request - State: open - Opened by roussel-ryan about 1 year ago

#144 - bugfix for using turbo with maximization + test

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago - 1 comment

#143 - Pydantic xopt object

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

#142 - Bugfixes and constrained optimization example

Pull Request - State: closed - Opened by roussel-ryan about 1 year ago

GitHub / ChristopherMayes/Xopt issues and pull requests