Ecosyste.ms: Issues

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GitHub / ChiLiubio/file2meco issues and pull requests

#24 - qiime2meco with data.frame doesn't work

Issue - State: open - Opened by guidohooiveld 10 days ago - 1 comment
Labels: enhancement

#23 - Using Kraken2 Output from 16S ONT Epi2me software

Issue - State: open - Opened by abbyf1120 4 months ago - 3 comments
Labels: documentation

#22 - Questions on import metaphlan result

Issue - State: open - Opened by Jin-1106 4 months ago - 8 comments
Labels: documentation

#21 - Support for (Tree)SummarizedExperiment?

Issue - State: closed - Opened by antagomir 8 months ago - 6 comments
Labels: enhancement

#19 - #Error in read_qza(feature_table) : Path to artifact (.qza) not provided.

Issue - State: open - Opened by yezi0721 about 2 years ago - 11 comments

#18 - import ASV sequences rep_fasta using phyloseq2meco

Issue - State: open - Opened by fconstancias about 2 years ago - 1 comment
Labels: enhancement

#13 - Where does MetaCyc_pathway_map come from?

Issue - State: open - Opened by YuZhang-learner over 2 years ago - 3 comments
Labels: documentation, good first issue

#12 - trans_beta error

Issue - State: open - Opened by panavoorjabir over 2 years ago - 1 comment

#11 - Error in file.exists(file) : object 'data2_table.qza' not found

Issue - State: open - Opened by yezi0721 over 2 years ago - 8 comments

#7 - phyloseq2meco

Issue - State: closed - Opened by mtva0001 about 3 years ago - 2 comments

#5 - deseq2 to microtable

Issue - State: closed - Opened by ShailNair over 3 years ago - 5 comments
Labels: documentation

#4 - Phyloseq object to microtable

Issue - State: closed - Opened by rsiani over 3 years ago - 3 comments

#3 - Conversion between microtable and phyloseq

Issue - State: closed - Opened by kbitenieks over 3 years ago - 2 comments

#2 - QIIME2 files to microtable?

Issue - State: closed - Opened by kd-lab over 3 years ago - 2 comments

#1 - trans_env class error

Issue - State: closed - Opened by HCB-M2RG over 3 years ago - 1 comment