ChangLabUcsf/img_pipe issues and pull requests

#47 - Manual Electrode identification

Issue - State: open - Opened by CenXiang 2 months ago - 2 comments

#46 - Python 3.12 compatibility

Pull Request - State: open - Opened by hans 3 months ago

#45 - template plot failed

Issue - State: open - Opened by xiaolongwu0713 over 2 years ago

#44 - mark electrodes

Issue - State: open - Opened by CarinaFo over 3 years ago

#43 - Required disk space?

Issue - State: open - Opened by CarinaFo over 3 years ago

#42 - added compatibility for deprecated "raw_input" in python 3

Pull Request - State: open - Opened by b-schd about 4 years ago

#41 - Solved some issues to run img_pipe on the ICBM MNI 152 NLIN ASYM 2009b

Pull Request - State: open - Opened by abush84 over 4 years ago

#40 - Fixed bug preventing removal of marked electrodes

Pull Request - State: open - Opened by jersaal over 4 years ago

#39 - Problem installing the toolbox

Issue - State: open - Opened by alepebel almost 5 years ago - 2 comments

#38 - Marking/Projecting Contacts

Issue - State: open - Opened by adam2392 over 5 years ago

#37 - plot from NWB files

Pull Request - State: open - Opened by luiztauffer over 5 years ago - 3 comments

#36 - install is broken for me

Issue - State: open - Opened by bendichter over 5 years ago - 2 comments

#35 - .iteritems is depricated in Python3

Issue - State: open - Opened by TheBrainChain almost 6 years ago - 1 comment

#34 - img_pipe + NWB

Issue - State: open - Opened by bendichter over 6 years ago - 3 comments

#33 - license?

Issue - State: open - Opened by bendichter about 7 years ago

#32 - check auto_2D_brain arguments

Pull Request - State: closed - Opened by bendichter about 7 years ago

#31 - auto_2d_brain brain_file and no elecs_file

Issue - State: closed - Opened by bendichter about 7 years ago - 1 comment

#30 - create conda recipe

Issue - State: open - Opened by bendichter about 7 years ago
Labels: enhancement

#29 - add gaussian blob figure to gallery

Issue - State: open - Opened by libertyh about 7 years ago
Labels: enhancement

#28 - Add support for electrode circles in 2D

Issue - State: open - Opened by libertyh about 7 years ago - 1 comment
Labels: enhancement

#27 - parallel electrode warping

Issue - State: open - Opened by bendichter about 7 years ago - 6 comments
Labels: enhancement

#26 - clean up some redundancies in plot_brain

Pull Request - State: closed - Opened by libertyh about 7 years ago

#25 - Plot all surface rois

Pull Request - State: closed - Opened by libertyh about 7 years ago

#24 - Clean up loading surfaces from template vs. native brain

Issue - State: closed - Opened by libertyh about 7 years ago - 1 comment
Labels: enhancement

#23 - 2d projection of warped electrode positions

Issue - State: closed - Opened by bendichter about 7 years ago - 5 comments

#22 - add optional filename arguments to auto_2d_brain

Pull Request - State: closed - Opened by bendichter about 7 years ago - 1 comment

#21 - Help disappears from electrode_picker on click

Issue - State: closed - Opened by libertyh about 7 years ago - 1 comment

#20 - mayavi legend

Issue - State: closed - Opened by libertyh over 7 years ago - 1 comment

#19 - Fix white space in 2D projection images

Issue - State: closed - Opened by libertyh over 7 years ago - 1 comment
Labels: enhancement

#18 - fixed plot_all_surface_rois docstring

Pull Request - State: closed - Opened by bendichter over 7 years ago - 2 comments

#17 - interp_grid() could be made much more general

Issue - State: closed - Opened by libertyh over 7 years ago - 1 comment
Labels: enhancement

#16 - Suggestion: port 2D projection to python and add as option

Issue - State: closed - Opened by libertyh over 7 years ago - 2 comments
Labels: enhancement

#15 - img_pipe on pia

Issue - State: closed - Opened by bendichter over 7 years ago

#14 - Change docstrings to NumPy style

Issue - State: closed - Opened by libertyh over 7 years ago - 1 comment
Labels: enhancement

#13 - add plot_all_surface_rois

Pull Request - State: closed - Opened by bendichter over 7 years ago

#12 - unused variables

Issue - State: closed - Opened by bendichter over 7 years ago - 1 comment

#11 - freeCoG.make_rio_mesh() requires write access to SUBJECT_DIR

Issue - State: closed - Opened by bendichter over 7 years ago - 1 comment

#10 - color all rois

Issue - State: closed - Opened by bendichter over 7 years ago - 3 comments
Labels: enhancement

#9 - patient.plot_brain() output

Issue - State: closed - Opened by bendichter over 7 years ago - 2 comments

#8 - Compute surface warp

Pull Request - State: closed - Opened by bendichter over 7 years ago

#7 - I would like to be able to pass in elecmatrix to get_surface_warp.

Issue - State: closed - Opened by bendichter over 7 years ago - 2 comments
Labels: enhancement

#6 - Update setup.py: specify mpl version

Pull Request - State: closed - Opened by bendichter over 7 years ago

#5 - Create .gitignore

Pull Request - State: closed - Opened by bendichter over 7 years ago - 3 comments

#4 - change the default colormap for ctmr_gauss_plot to be RdBu_r

Pull Request - State: closed - Opened by bendichter over 7 years ago

#3 - custom colormaps for `ctmr_gauss_plot`

Issue - State: closed - Opened by bendichter over 7 years ago - 2 comments
Labels: enhancement

#2 - Known issue with matplotlib 2.0.1

Issue - State: closed - Opened by libertyh over 7 years ago - 1 comment
Labels: bug

#1 - import error on mcubes

Issue - State: closed - Opened by bendichter over 7 years ago - 10 comments

GitHub / ChangLabUcsf/img_pipe issues and pull requests