Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / CatalogueOfLife/xcol issues and pull requests

#111 - unmerged names derives on duplication

Issue - State: open - Opened by camiplata 8 months ago - 1 comment

#111 - unmerged names derives on duplication

Issue - State: open - Opened by camiplata 8 months ago - 1 comment

#109 - Families (and descendants) merged in xCOL even already in COL checklist

Issue - State: closed - Opened by DianRHR 9 months ago - 4 comments
Labels: next_release

#108 - Start aplating decitions

Issue - State: open - Opened by camiplata 9 months ago

#106 - Wrongly labeled source: says ITIS but it's WoRMS

Issue - State: closed - Opened by DianRHR 10 months ago - 1 comment

#105 - WoRMS did not merge on the XCOL-2023-11-29 extended release

Issue - State: closed - Opened by camiplata 10 months ago - 6 comments

#104 - Verify issues exclusion

Issue - State: closed - Opened by camiplata 10 months ago - 2 comments

#103 - Review unplaced families

Issue - State: open - Opened by camiplata 10 months ago - 1 comment

#101 - Names to be excluded for merging in XCOL: to be added to the config file

Issue - State: open - Opened by DianRHR 10 months ago - 2 comments

#98 - xsources did not merge or partially merged

Issue - State: open - Opened by camiplata 11 months ago - 5 comments
Labels: bug, next_release

#97 - frontend dev - Sources are not listed on the xrelease

Issue - State: open - Opened by camiplata 11 months ago
Labels: bug, UI

#96 - frontend dev - Is not possible to navigate to the source of any given name

Issue - State: open - Opened by camiplata 11 months ago - 1 comment
Labels: bug, UI

#95 - Create Release QC document/checklist

Issue - State: open - Opened by camiplata 11 months ago - 2 comments

#94 - Create XRelease QC document

Issue - State: closed - Opened by camiplata 11 months ago

#93 - odd behaviour in merging - small projects testing Regulus and Corthylio

Issue - State: closed - Opened by DianRHR 11 months ago - 1 comment

#92 - download tool not working for XCOL-2023-09-27

Issue - State: closed - Opened by DianRHR 11 months ago

#91 - Organice unplaced names

Issue - State: closed - Opened by camiplata 11 months ago - 4 comments
Labels: bug, code, next_release

#90 - Salmonidae Jarocki or Schinz, 1822

Issue - State: closed - Opened by mdoering 11 months ago - 3 comments

#89 - Block placeholder names

Issue - State: closed - Opened by mdoering 12 months ago - 4 comments

#88 - Verify homotypic consolidation results

Issue - State: open - Opened by mdoering 12 months ago - 1 comment

#87 - Same genus (from the same source) included more than once

Issue - State: open - Opened by DianRHR 12 months ago - 3 comments
Labels: code

#86 - Avoid merging species with a different genus as parent.

Issue - State: closed - Opened by DianRHR 12 months ago - 1 comment
Labels: code

#85 - Patterns found in duplicates W38

Issue - State: closed - Opened by DianRHR 12 months ago

#84 - Nomenclatural notes should not be part of the authorship

Issue - State: open - Opened by DianRHR 12 months ago - 2 comments

#83 - Navigation of the tree creates a Request failed with status code 500

Issue - State: closed - Opened by camiplata 12 months ago - 5 comments

#82 - Kingdom Animalia is duplicated appearing one time outside biota

Issue - State: closed - Opened by camiplata 12 months ago - 2 comments

#81 - merge more authorships

Issue - State: open - Opened by mdoering 12 months ago
Labels: low priority

#80 - WoRMS unplaced names from XW38 are algae

Issue - State: open - Opened by camiplata 12 months ago
Labels: editorial, data

#79 - WoRMS has many extinct taxa that are shown as extant on CLB

Issue - State: closed - Opened by camiplata 12 months ago - 3 comments
Labels: code, data

#78 - Consider to use parts of IRMNG only

Issue - State: open - Opened by mdoering 12 months ago

#77 - order merge sectors on dev

Issue - State: closed - Opened by mdoering 12 months ago - 1 comment
Labels: editorial

#76 - Avoid inclusion of "numbered" names from sources without OTU

Issue - State: closed - Opened by DianRHR 12 months ago - 1 comment
Labels: code

#74 - xRelease W37: Correct “duplicates” but homonyms not labeled properly

Issue - State: open - Opened by DianRHR 12 months ago - 2 comments
Labels: code

#73 - Odd duplicates found in xRelease W37

Issue - State: closed - Opened by DianRHR 12 months ago - 3 comments
Labels: code

#72 - Remove quotation marks and similar marks that enclose authorship

Issue - State: closed - Opened by DianRHR almost 1 year ago - 3 comments
Labels: data

#71 - Incorrect subgenus placement of species during merge

Issue - State: closed - Opened by camiplata almost 1 year ago - 1 comment
Labels: code

#70 - Remove subgenus from the binomial if the subgenus is not in COL

Issue - State: closed - Opened by camiplata almost 1 year ago - 2 comments
Labels: code

#69 - Add issues feature to releases

Issue - State: closed - Opened by camiplata almost 1 year ago - 7 comments
Labels: enhancement

#68 - United Kingdom Species Inventory (UKSI) - Import Failed

Issue - State: open - Opened by camiplata about 1 year ago - 3 comments
Labels: data

#67 - SF dataset both as GSDs and GBIF backbone additional sources

Issue - State: open - Opened by camiplata about 1 year ago - 1 comment
Labels: question, data

#66 - how to check xrelease issues and duplicates

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: question

#65 - unexpected placement of a species ignoring higher taxonomy

Issue - State: closed - Opened by camiplata about 1 year ago - 4 comments
Labels: bug, code

#64 - subgenus from xrelease sources are ignored - should we reconsider adding subgenus by default?

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: editorial

#63 - Upper case epithets cause problems - Cambarus Uhleri Faxon, 1884

Issue - State: closed - Opened by mdoering about 1 year ago - 1 comment

#61 - GBIF checklists with little COL overlap

Issue - State: open - Opened by mdoering about 1 year ago - 5 comments
Labels: source

#60 - potential new xcol source for ants

Issue - State: open - Opened by mdoering about 1 year ago - 1 comment
Labels: source

#59 - consider Korean Flora as xcol source

Issue - State: closed - Opened by mdoering about 1 year ago - 2 comments
Labels: source

#58 - 61,992 species "Name parent mismatch" in Paleobiology Database won't be included in xCOL

Issue - State: open - Opened by DianRHR about 1 year ago - 2 comments
Labels: editorial, data

#57 - SIPUNCULA- Problematic taxa in Annelida

Issue - State: open - Opened by camiplata about 1 year ago - 1 comment
Labels: editorial, data

#56 - unranked taxa from Bold is missing from project results

Issue - State: closed - Opened by camiplata about 1 year ago - 3 comments
Labels: bug, code

#55 - Inconsistent merge results

Issue - State: closed - Opened by camiplata about 1 year ago - 2 comments
Labels: bug

#54 - unmerged duplicate names between sources

Issue - State: closed - Opened by camiplata about 1 year ago - 2 comments
Labels: bug

#53 - BOLD dataset in coltest without data under phylum

Issue - State: closed - Opened by DianRHR about 1 year ago - 3 comments

#52 - Species as family synonyms?

Issue - State: open - Opened by mdoering about 1 year ago - 1 comment

#51 - Remove accordingTo during sync

Issue - State: closed - Opened by mdoering about 1 year ago
Labels: code

#50 - Assign an alias to all extended sources

Issue - State: open - Opened by mdoering about 1 year ago - 6 comments
Labels: editorial

#49 - XRelease source metrics missing merge sectors

Issue - State: closed - Opened by mdoering about 1 year ago - 2 comments

#48 - Specify the kind of new metrics needed for an XCOL

Issue - State: open - Opened by mdoering about 1 year ago

#47 - Investigate and fix reason for chained synonyms

Issue - State: closed - Opened by mdoering about 1 year ago - 3 comments

#46 - Evaluate ChecklistBank UI for XReleases

Issue - State: open - Opened by mdoering about 1 year ago - 2 comments

#45 - Review download tool in xcol test

Issue - State: closed - Opened by DianRHR about 1 year ago - 6 comments

#44 - List of test cases - names that potentialy create problems while merging

Issue - State: open - Opened by camiplata about 1 year ago - 1 comment

#43 - Small projects text of merging OTUs

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: review

#42 - Search Index rebuild

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment

#41 - Review w29 xrelease

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: review

#40 - Make sure no incertae sedis taxa are on root level

Issue - State: closed - Opened by mdoering about 1 year ago - 1 comment

#39 - Where are the unplaced names comming from

Issue - State: closed - Opened by camiplata about 1 year ago - 6 comments

#38 - XRelease source link not working

Issue - State: closed - Opened by mdoering about 1 year ago

#37 - Check behaviour of some families under Incertae sedis in GBIF Taxonomy backbone

Issue - State: closed - Opened by DianRHR about 1 year ago - 1 comment

#36 - zoobank - ScientificName and taxonRank mismatch

Issue - State: open - Opened by camiplata about 1 year ago - 2 comments
Labels: data

#35 - Check ymal file with the additional sources for the xcol

Issue - State: closed - Opened by camiplata about 1 year ago - 3 comments
Labels: review

#34 - zoobank - ScientificName with "tobedeleted"

Issue - State: open - Opened by camiplata about 1 year ago - 2 comments
Labels: editorial, data

#33 - checklists published in both GBIF an CLB with different licenses

Issue - State: open - Opened by camiplata about 1 year ago - 1 comment

#32 - zoobank - around hundred unresolved names

Issue - State: open - Opened by camiplata about 1 year ago
Labels: editorial, data

#31 - Zoobank - scientificNameAuthorship empty values filled with the string: <Unspecified Agent>

Issue - State: open - Opened by camiplata about 1 year ago - 6 comments
Labels: data

#30 - Regional / Thematic CheckLists to add to xcol

Issue - State: closed - Opened by camiplata about 1 year ago - 2 comments

#29 - Fix homotypic grouping build exception

Issue - State: closed - Opened by mdoering about 1 year ago - 1 comment
Labels: bug

#28 - Check xcol release project documentation

Issue - State: closed - Opened by camiplata about 1 year ago - 2 comments
Labels: documentation

#27 - Review W27 xcol release

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: review

#26 - Fix licensing for all sources that will be use for xcol release

Issue - State: open - Opened by camiplata about 1 year ago - 9 comments
Labels: documentation, editorial

#25 - Create xCOL release Patch dataset

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: editorial

#24 - Find a way to see the management higher hierarchy in the project that do not have a source

Issue - State: open - Opened by camiplata about 1 year ago
Labels: documentation, UI

#23 - Prevent xcol sources to add unranked names above Family level

Issue - State: closed - Opened by camiplata about 1 year ago - 1 comment
Labels: code

#22 - why does Biota has not secondary sources

Issue - State: closed - Opened by camiplata about 1 year ago - 2 comments
Labels: code

#21 - Investigate kingdoms disaperance

Issue - State: closed - Opened by camiplata about 1 year ago
Labels: code, review

#20 - Check Families under incertae sedis XCOL 2023-07-03

Issue - State: closed - Opened by camiplata about 1 year ago - 5 comments
Labels: editorial, review

#19 - Check data quality of checklist from Journals

Issue - State: open - Opened by camiplata about 1 year ago

#18 - Lost synonyms on ITIS?

Issue - State: closed - Opened by camiplata over 1 year ago - 2 comments

#16 - Add publisher source issue filter

Issue - State: open - Opened by mdoering about 1 year ago

#15 - Orthographic variant detection

Issue - State: open - Opened by mdoering about 1 year ago - 1 comment
Labels: code

#14 - Implement misspelling decision

Issue - State: open - Opened by mdoering about 1 year ago
Labels: editorial, code

#13 - Rebuild names index

Issue - State: closed - Opened by mdoering about 1 year ago