Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / CancerRxGene/gdscmatrixexplorer issues and pull requests

#100 - Add option to switch tissue to cancer type on combination page

Issue - State: closed - Opened by Donnyvdm over 5 years ago - 1 comment
Labels: enhancement

#99 - Color range for viability plot hard to interpret in mid-range

Issue - State: closed - Opened by Donnyvdm over 5 years ago - 1 comment
Labels: enhancement

#96 - Add cancer type as selection option in flexiscatter

Issue - State: closed - Opened by Donnyvdm over 5 years ago

#95 - Relabel null models on matrix page

Issue - State: closed - Opened by Donnyvdm over 5 years ago - 1 comment
Labels: enhancement

#94 - Downloaded results has misaligned column headers

Issue - State: closed - Opened by howard-lightfoot over 5 years ago - 1 comment
Labels: bug

#93 - Concentration labels are missing in the viability surface plot.

Issue - State: closed - Opened by howard-lightfoot over 5 years ago - 1 comment
Labels: bug

#92 - Inconsistencies in use of MaxE

Issue - State: closed - Opened by Donnyvdm over 5 years ago

#91 - Feature/speed improvements

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#90 - Feature/fix loading spinner

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#89 - Data download columns should match original files

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: bug

#88 - Feature/fix hover labels

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#86 - On the summary page for a specific combination always shows the same cell line.

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: bug

#85 - On the summary page, the text on hover always shows the same combination

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: bug

#84 - In the overview plots, hover label is always the same.

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: bug

#83 - Feature/new columns

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#82 - Add Patricia as a second Sanger contact in footer

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: enhancement

#81 - Feature/fix surface but

Pull Request - State: closed - Opened by wendyyang over 5 years ago

#80 - Matrix combination interaction plots: color surface doesn't match heatmap

Issue - State: closed - Opened by wendyyang over 5 years ago
Labels: bug, enhancement

#79 - Drug combination interaction heatmap red white blue colour scheme

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: enhancement

#78 - Default combination activity/synergy metric to be Bliss in all menus

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: enhancement

#77 - Add Excess over Bliss to matrix summary box

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: enhancement

#76 - Feature/add single agent heapmap

Pull Request - State: closed - Opened by wendyyang over 5 years ago

#75 - Feature/rebranding

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#74 - Feature/documentation downloads

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#73 - rename 'Emax' or 'Max Effect' to MaxE,

Pull Request - State: closed - Opened by wendyyang over 5 years ago

#72 - Feature/filter on flexiscatter

Pull Request - State: closed - Opened by wendyyang over 5 years ago

#71 - Feature/day1 viab on drplot

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#70 - Display the single-agent data besides the viability heatmap

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: enhancement

#69 - Fix hover labels on combination page and make tissue plot clickable

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#68 - remove 'slice' plots from matrix page and db

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#67 - add barcode to matrix page

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#66 - Feature/highlight poor rmse

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#65 - Need error message when project doesn't exist

Issue - State: closed - Opened by wendyyang over 5 years ago
Labels: bug

#64 - Add a download option to the app

Issue - State: closed - Opened by Donnyvdm over 5 years ago - 1 comment
Labels: enhancement

#63 - Link the y-axis labels in the project boxplot directly to the combinations

Issue - State: closed - Opened by Donnyvdm over 5 years ago - 1 comment
Labels: enhancement

#62 - Mark IC50 > maxc for single agent data

Issue - State: open - Opened by Donnyvdm over 5 years ago
Labels: enhancement

#61 - Remove row-wise and column-wise fits from app

Issue - State: closed - Opened by Donnyvdm over 5 years ago
Labels: ver. 1

#60 - Feature/bootstrap components

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#59 - Project level tissue filter #50

Pull Request - State: closed - Opened by wendyyang over 5 years ago

#58 - Feature/style matrix page metrics

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#57 - Feature/models add day1 data

Pull Request - State: closed - Opened by howard-lightfoot over 5 years ago

#56 - Feature/metric labels

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#55 - Feature/max effect lvl 2

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#54 - Refactor dropdowns and add model dropdown to combination page

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#53 - Feature/fix surface gaps

Pull Request - State: closed - Opened by Donnyvdm over 5 years ago

#52 - Include targets of drugs at level 1

Issue - State: closed - Opened by howard-lightfoot over 5 years ago

#51 - Add maximum combination effect to project level boxplot.

Issue - State: closed - Opened by howard-lightfoot over 5 years ago - 1 comment
Labels: ver. 1

#50 - Project level tissue filter

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: ver. 1

#49 - Use NCI formula numbers

Issue - State: open - Opened by howard-lightfoot over 5 years ago - 1 comment
Labels: wontfix

#48 - Report sum of synergy metrics across matrix

Issue - State: open - Opened by howard-lightfoot over 5 years ago
Labels: enhancement

#47 - Report day 1 in spreadsheet & Summary box

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: ver. 1

#46 - Cell line selection at level 1 or level 2

Issue - State: closed - Opened by howard-lightfoot over 5 years ago
Labels: ver. 1

#45 - Max effect boxplot per combination

Issue - State: closed - Opened by howard-lightfoot over 5 years ago - 1 comment
Labels: enhancement, ver. 1

#44 - Plot

Issue - State: closed - Opened by howard-lightfoot over 5 years ago

#43 - Report number of synergistic wells for a window

Issue - State: open - Opened by howard-lightfoot over 5 years ago

#42 - Feature/issues#19#20#21

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago - 1 comment

#41 - Feature/issue#7 maxeffects

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#40 - Add barcode to matrix page title

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago

#39 - Y-axis flipped (top/bottom) and have a red-blue color scale #23

Pull Request - State: closed - Opened by wendyyang almost 6 years ago

#38 - Feature/issue#3

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#37 - Feature/dashauth

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#36 - Password authentication using database

Issue - State: open - Opened by howard-lightfoot almost 6 years ago
Labels: enhancement

#35 - Revert "Feature/dockerize"

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#34 - Feature/dockerize

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#33 - Feature/dockerize

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago - 1 comment

#32 - Add a Documentation / Glossary page

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement, ver. 1

#31 - Close the main menu dropdowns upon page navigation

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: bug

#30 - Show matrix heatmap on mm-plot hover

Issue - State: open - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#29 - Fix browser back-button use for clickable-plots

Issue - State: open - Opened by Donnyvdm almost 6 years ago - 3 comments
Labels: bug, wontfix

#28 - Add raw data download option

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#27 - Fix single agent dose response plot height

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: bug

#26 - Fill matrix summary-box with useful information

Issue - State: closed - Opened by Donnyvdm almost 6 years ago - 1 comment
Labels: enhancement

#25 - Tidy up metrics display on matrix page

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement, ver. 1

#24 - Fix issues with z-axis on matrix surface plot for excess-metrics

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: bug

#23 - Changes to matrix viability heatmap

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#22 - Rename Emax

Issue - State: closed - Opened by Donnyvdm almost 6 years ago - 1 comment
Labels: enhancement, ver. 1

#21 - Sort combination tissue-boxplot by median effect

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#20 - Consistent color scale on mm-plot on combination page

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#19 - Add screening concentration to combination page

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#18 - Compare combinations

Issue - State: open - Opened by Donnyvdm almost 6 years ago - 1 comment
Labels: enhancement

#17 - Allow filtering of FlexiScatter data

Issue - State: closed - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#16 - Add colour legend to FlexiScatter when coloured by tissue

Issue - State: open - Opened by Donnyvdm almost 6 years ago
Labels: enhancement

#15 - Update combination metrics

Issue - State: closed - Opened by Donnyvdm almost 6 years ago - 1 comment
Labels: enhancement, ver. 1

#14 - Update plot hover labels

Issue - State: closed - Opened by Donnyvdm almost 6 years ago

#13 - Put the app in a Docker container

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago

#12 - Test application with multiple users

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago

#11 - Linked rotation of surface plots

Issue - State: open - Opened by howard-lightfoot almost 6 years ago
Labels: enhancement

#10 - Plot Day1 viability on dose response plots

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago
Labels: enhancement, ver. 1

#9 - Compare>1 matrix at a time

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago - 1 comment
Labels: enhancement

#8 - Download PDF reports for cell line + combination

Issue - State: open - Opened by howard-lightfoot almost 6 years ago
Labels: enhancement

#7 - Add maximum activity score per matrix

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago - 1 comment
Labels: enhancement

#6 - Highlight poor RMSE on dose response plots

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago - 1 comment
Labels: enhancement

#5 - Link from tissue specific boxplot to matrix results

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago
Labels: enhancement

#4 - Define a combination as project + {drug1 + drug2}

Issue - State: closed - Opened by howard-lightfoot almost 6 years ago
Labels: bug

#3 - Feature/combinations page

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#2 - Revert "Feature/combinations page"

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago

#1 - Feature/combinations page

Pull Request - State: closed - Opened by howard-lightfoot almost 6 years ago