Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / COSIMA/cosima-cookbook issues and pull requests

#344 - New README

Pull Request - State: closed - Opened by navidcy 3 months ago - 2 comments

#343 - Wiki outdated?

Issue - State: closed - Opened by navidcy 4 months ago - 7 comments
Labels: 📜 documentation

#342 - Deprecation warning

Issue - State: closed - Opened by navidcy 5 months ago
Labels: 🙋🏽‍♀️ question, 💔 schema breaking, 🛸 feature

#341 - Stop capturing all warnings

Pull Request - State: closed - Opened by angus-g 5 months ago - 3 comments

#340 - `cosima-cookbook.readthedocs.io` out of date

Issue - State: closed - Opened by aekiss 5 months ago - 1 comment
Labels: 📜 documentation

#339 - Update README.md

Pull Request - State: closed - Opened by aekiss 6 months ago - 1 comment

#338 - Add get_ranges query function

Pull Request - State: open - Opened by angus-g 7 months ago

#337 - Database module captures all warnings

Issue - State: closed - Opened by navidcy 7 months ago - 3 comments
Labels: 🐞 bug, 🙋🏽‍♀️ question

#336 - Assign proper (2D) lat-lon coords with `getvar`

Issue - State: open - Opened by navidcy 9 months ago - 1 comment
Labels: 🛸 feature, 👨‍👩‍👧‍👦👨‍👩‍👦‍👦👨‍👩‍👧‍👧 user experience

#335 - `cookbook` with `dask` client gives out _a lot of_ warnings about bad chunking

Issue - State: open - Opened by navidcy 9 months ago - 9 comments
Labels: 🛟 help wanted, 🙋🏽‍♀️ question

#334 - Data should not be stored in a tmp folder

Issue - State: open - Opened by max-anu 12 months ago - 1 comment

#333 - `querying.getvar` doesn't accept `chunks='auto'` kwarg

Issue - State: open - Opened by anton-seaice about 1 year ago - 1 comment
Labels: 🐞 bug

#332 - Easterlies perturbation data moved

Issue - State: open - Opened by aidanheerdegen about 1 year ago - 3 comments

#331 - Pin sqlalchemy<2.0

Pull Request - State: closed - Opened by dougiesquire about 1 year ago - 3 comments

#330 - Degeneracy in variable name

Issue - State: open - Opened by aidanheerdegen about 1 year ago - 5 comments

#329 - Conda or Pip package

Issue - State: closed - Opened by anton-seaice about 1 year ago - 4 comments

#328 - add ARE instructions to README

Issue - State: open - Opened by aekiss about 1 year ago - 3 comments

#327 - Broken links in readthedocs.io

Issue - State: closed - Opened by rmholmes over 1 year ago - 1 comment

#326 - Broken links to tutorials in wiki

Issue - State: closed - Opened by lidefi87 over 1 year ago

#325 - Apply new formatting rules

Pull Request - State: closed - Opened by angus-g over 1 year ago

#324 - Variable not found

Issue - State: open - Opened by ashjbarnes over 1 year ago - 5 comments

#323 - Readthedocs links are broken

Issue - State: closed - Opened by ashjbarnes over 1 year ago - 1 comment

#322 - README includes deprecated VDI references

Issue - State: open - Opened by navidcy over 1 year ago
Labels: 📜 documentation

#321 - Explorer not working with analysis3-23.01

Issue - State: open - Opened by aekiss over 1 year ago - 3 comments

#320 - Cosima cookbook does not import with sqlalchemy 2

Issue - State: open - Opened by dsroberts almost 2 years ago - 2 comments

#319 - Should the cookbook default to stricter requirements when merging/concatenating data?

Issue - State: open - Opened by dougiesquire almost 2 years ago - 8 comments
Labels: 👨‍👩‍👧‍👦👨‍👩‍👦‍👦👨‍👩‍👧‍👧 user experience

#318 - Correct dictionary syntax in QueryWarning about ambiguous attributes

Pull Request - State: closed - Opened by angus-g almost 2 years ago - 1 comment

#317 - Bug in error message

Issue - State: closed - Opened by AndyHoggANU almost 2 years ago

#316 - Update failing CI tests

Pull Request - State: closed - Opened by angus-g almost 2 years ago

#315 - Update README.md

Pull Request - State: closed - Opened by aekiss almost 2 years ago - 1 comment

#313 - SQL PRAGMA Error

Issue - State: closed - Opened by dpath2o almost 2 years ago - 3 comments

#312 - New functionality to get unmasked grids

Issue - State: open - Opened by navidcy almost 2 years ago
Labels: 🛸 feature, 👨‍👩‍👧‍👦👨‍👩‍👦‍👦👨‍👩‍👧‍👧 user experience

#311 - Update instructions: nuke VDI and OOD; add ARE

Pull Request - State: closed - Opened by navidcy almost 2 years ago - 8 comments
Labels: 📜 documentation

#310 - Cookbook database doesn't deal with non zero-padded output folder names

Issue - State: closed - Opened by rmholmes about 2 years ago - 10 comments

#309 - One database for every experiment

Issue - State: open - Opened by aidanheerdegen about 2 years ago - 23 comments
Labels: 🧜🏽‍♀️ enhancement, 🥞 database

#308 - Python 3.10 compatibility / Test suite tweaks

Pull Request - State: closed - Opened by rbeucher about 2 years ago - 2 comments

#307 - Allow SQLAlchemy versions > 1.4.0.

Pull Request - State: closed - Opened by micaeljtoliveira over 2 years ago - 1 comment

#306 - one time level per file classified as "static"

Issue - State: open - Opened by aekiss over 2 years ago - 6 comments
Labels: 🐞 bug

#305 - Explorer tools performance

Issue - State: open - Opened by aidanheerdegen over 2 years ago - 2 comments
Labels: 🏎 performance / optimization

#304 - Upgraded resource class for CircleCI builds

Pull Request - State: closed - Opened by aidanheerdegen over 2 years ago

#303 - CircleCI conda builds failing

Issue - State: closed - Opened by aidanheerdegen over 2 years ago

#302 - Move conda build to Github Actions

Issue - State: open - Opened by aidanheerdegen over 2 years ago - 2 comments
Labels: 📦 package

#301 - Add code coverage with codecov

Pull Request - State: closed - Opened by micaeljtoliveira over 2 years ago

#300 - Add a script to update a database

Pull Request - State: closed - Opened by micaeljtoliveira over 2 years ago

#299 - Dedicated indexing script

Issue - State: open - Opened by aidanheerdegen over 2 years ago - 1 comment

#298 - Fixed missing indexing error when named time_bounds variable missing

Pull Request - State: closed - Opened by aidanheerdegen over 2 years ago - 2 comments

#297 - Missing bounds variable causes error in indexing

Issue - State: closed - Opened by aidanheerdegen over 2 years ago

#296 - Expose DB via web interface

Issue - State: open - Opened by aidanheerdegen over 2 years ago - 1 comment

#295 - Change to xarray for indexing

Issue - State: open - Opened by aidanheerdegen over 2 years ago
Labels: 🧜🏽‍♀️ enhancement, 🥞 database, 💔 schema breaking

#294 - Make cell_methods-derived bounds optional in getvar

Pull Request - State: closed - Opened by angus-g over 2 years ago - 2 comments

#292 - Improve indexing robustness and reduce memory use

Pull Request - State: closed - Opened by aidanheerdegen over 2 years ago - 4 comments

#291 - Reorder attribute cache lookups

Pull Request - State: closed - Opened by angus-g over 2 years ago - 3 comments

#290 - Change to cache lookup deleterious to indexing performance

Issue - State: closed - Opened by aidanheerdegen over 2 years ago - 5 comments
Labels: 🐞 bug

#289 - Resolve the database filename before creating the session.

Pull Request - State: closed - Opened by micaeljtoliveira over 2 years ago - 1 comment

#288 - Make create_session deference symlinks

Issue - State: closed - Opened by aidanheerdegen over 2 years ago - 2 comments
Labels: 🧜🏽‍♀️ enhancement

#287 - Loading CICE data is very expensive

Issue - State: open - Opened by MartinDix over 2 years ago - 4 comments

#286 - Bounds variable search assumes time dimension name

Issue - State: open - Opened by angus-g over 2 years ago

#285 - Attempting to make indexing faster and more robust

Pull Request - State: closed - Opened by aidanheerdegen over 2 years ago

#284 - Add time_bounds breaks serialisation

Issue - State: closed - Opened by aidanheerdegen almost 3 years ago - 4 comments
Labels: 🐞 bug

#283 - Add support for sqlalchemy 1.4

Pull Request - State: closed - Opened by ScottWales almost 3 years ago - 2 comments

#282 - Add warning message for invalid chunks

Pull Request - State: closed - Opened by ScottWales about 3 years ago - 1 comment

#281 - Warn when chunk dimensions are invalid

Issue - State: closed - Opened by ScottWales about 3 years ago - 3 comments

#280 - Investigate using "zarr-like" access on existing data files

Issue - State: open - Opened by aidanheerdegen about 3 years ago - 1 comment
Labels: 🧜🏽‍♀️ enhancement

#279 - Blurb in "About" of this repo

Issue - State: closed - Opened by navidcy about 3 years ago - 1 comment
Labels: 📦 package

#278 - Pinned version of sqlalchemy<1.4 in conda

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 1 comment

#277 - Save sorted list of experiments outside concat comprehension

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 2 comments

#276 - Bug in PR to support multiple experiments

Issue - State: closed - Opened by aidanheerdegen about 3 years ago

#275 - can't access jra55 data

Issue - State: closed - Opened by fzhang0 about 3 years ago - 5 comments

#274 - Re-factor database extension and support cell_methods in ExperimentExplorer

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 9 comments

#273 - Add support for cell_methods to explorer

Issue - State: closed - Opened by aidanheerdegen about 3 years ago - 3 comments

#272 - Cookbook docs need attention

Issue - State: open - Opened by aidanheerdegen about 3 years ago - 2 comments
Labels: 📜 documentation

#270 - Add experimental config control url

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 2 comments

#269 - Reindex if file updated

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 1 comment

#268 - Add experiment metadata to DataArray returned from getvar

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 1 comment

#267 - Add units to ExperimentExplorer

Pull Request - State: closed - Opened by aidanheerdegen about 3 years ago - 1 comment

#266 - Add COSIMA metadata to attributes of data returned from getvar

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 7 comments

#265 - Add list of ncfiles as attribute to DataArray

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago - 1 comment

#264 - Add index to NCAttributes table

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago

#263 - Return list of opened files in getvar as attribute

Issue - State: closed - Opened by aidanheerdegen over 3 years ago
Labels: 🧜🏽‍♀️ enhancement

#262 - Link to experimental configuration GitHub repo in metadata

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 14 comments
Labels: 🧜🏽‍♀️ enhancement, 💔 schema breaking, 🗂 metadata

#261 - Fix variable filtering in DatabaseExplorer

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago - 1 comment

#260 - Explorer assumes that users have `import cosima_cookbook as cc`

Issue - State: closed - Opened by navidcy over 3 years ago - 2 comments

#259 - Can't catch VariableNotFoundError (not defined)

Issue - State: closed - Opened by aekiss over 3 years ago - 1 comment
Labels: 🐞 bug

#258 - Explorer filter by variable doesn't work

Issue - State: closed - Opened by aekiss over 3 years ago - 1 comment

#257 - Fixed logic with missing attribute

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago

#256 - Issue 252 fix

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago

#254 - Warnings have been turned off

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 4 comments

#253 - Querying on attributes is too slow for operational use

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 5 comments

#252 - Silently loads incorrect data when variables only differ by cell_methods

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 28 comments
Labels: 🐞 bug

#251 - Update README.md

Pull Request - State: closed - Opened by aekiss over 3 years ago

#250 - Adds logo in README and homogenises Cosima-related package naming

Pull Request - State: closed - Opened by navidcy over 3 years ago - 3 comments

#249 - Fix logic for skipping existing files in database

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago - 4 comments

#248 - Indexing ignoring new files for 01deg_jra55v140_iaf_KvJ09

Issue - State: closed - Opened by aidanheerdegen over 3 years ago - 5 comments

#247 - Can't create database session

Issue - State: closed - Opened by fzhang0 over 3 years ago - 2 comments

#246 - Indexing is too slow

Issue - State: open - Opened by aidanheerdegen over 3 years ago - 1 comment
Labels: 🏎 performance / optimization

#245 - Support split experiments

Pull Request - State: closed - Opened by aidanheerdegen over 3 years ago - 3 comments