Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / COMBINE-lab/pyroe issues and pull requests
#44 - Optional pyranges
Pull Request -
State: open - Opened by DongzeHE 8 months ago
#43 - Upgrade pyranges and pandas
Pull Request -
State: closed - Opened by DongzeHE 8 months ago
#42 - latest pandas
Issue -
State: open - Opened by wangjiawen2013 9 months ago
- 5 comments
#41 - Duplicate entries for spliceu index
Issue -
State: closed - Opened by davidaknowles about 1 year ago
- 12 comments
#40 - fix: fix bug in format detection for id-to-name
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#39 - Bug in id-to-name
Issue -
State: closed - Opened by zedongL over 1 year ago
- 2 comments
#38 - merge develop
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
- 1 comment
#37 - fix: fix pyranges version
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#36 - fix: pandas version & subcommand alias
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#35 - merge main back into dev
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#34 - ci skip: bump version
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#33 - Develop
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#32 - fix: fix bug in make_splici_txome
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#31 - the pyranges.introns() warning is still there, set warning filter
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
- 1 comment
#30 - Merge main back into develop
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#29 - more wording for documentation
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#28 - Update documentation
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#27 - merge develop into main
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#26 - merge main back into dev
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#25 - fix: update minimum pyranges version and exception handling
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#24 - fix: ensure only proper fields are written to bed file
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#23 - fix: refine bed file formats
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#22 - Merge develop into master
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#21 - Improve GTF parsing
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
- 2 comments
#20 - fix: fix bugs in "try except"
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#19 - feat: new predefined output_formats for load_fry function
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#18 - Develop
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#17 - Update README.md
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#16 - Merge main back into develop
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#15 - add alias for make-splici and make-spliceu
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#14 - Develop
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#13 - write test function for make_spliceu
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
#12 - Merge main updates back to dev
Pull Request -
State: closed - Opened by rob-p over 1 year ago
#11 - feat: add make_spliceu_txome function and command line tool
Pull Request -
State: closed - Opened by DongzeHE over 1 year ago
- 3 comments
#10 - Develop
Pull Request -
State: closed - Opened by rob-p almost 2 years ago
#9 - fix:correct gene id to name file name
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
#8 - fix:correct gene id to name file name
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
- 1 comment
#7 - Develop
Pull Request -
State: closed - Opened by rob-p almost 2 years ago
#6 - feat:improve robustness
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
#5 - feat: catch error when PyRanges.read_gtf fails.
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
#4 - feat:check GTF before processing + write gene_id_to_name.tsv
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
#3 - fix:check GTF before processing
Pull Request -
State: closed - Opened by DongzeHE almost 2 years ago
#2 - Merge develop into main for 0.6.0 release
Pull Request -
State: closed - Opened by rob-p over 2 years ago
#1 - `--extra-spliced` and `--extra-unspliced` options of `make-splici` only add two t2g columns, resulting in `alevin-fry quant` panic
Issue -
State: closed - Opened by jashephe over 2 years ago
- 3 comments