BrkRaw/brkraw issues and pull requests

#173 - master branch -- BIDS conversion warning about pandas usage

Issue - State: open - Opened by gdevenyi about 1 month ago - 2 comments

#171 - Use new BIDS tags to create nifti file names

Pull Request - State: open - Opened by jeremie-fouquet 5 months ago

#170 - bids_convert should use the new BIDS tags when naming nifti files

Issue - State: open - Opened by jeremie-fouquet 5 months ago

#169 - Implement New Plugin Architecture and Prepare for 0.4.0 Release

Pull Request - State: closed - Opened by dvm-shlee 7 months ago

#168 - Update CONTRIBUTING.MD

Pull Request - State: closed - Opened by dvm-shlee 7 months ago

#167 - [refactor] brkraw api and update for future version

Pull Request - State: closed - Opened by dvm-shlee 7 months ago

#166 - [patch] macos remove testing python 3.8 and 3.9

Pull Request - State: closed - Opened by dvm-shlee 7 months ago

#165 - Refactor and Ongoing Development in API Module

Pull Request - State: closed - Opened by dvm-shlee 7 months ago

#164 - Overhaul of the Reconstruction Pipeline to use a scanobj

Pull Request - State: closed - Opened by timwahoo 7 months ago

#163 - [hotpatch] resolving typing issue for python version < 3.10

Pull Request - State: closed - Opened by dvm-shlee 8 months ago

#162 - [patch] update type annotations for python <3.9 compatibility

Pull Request - State: closed - Opened by dvm-shlee 8 months ago

#161 - Enhancing Modular Architecture and Debugging in BrkRaw: Introduction of New API and App Modules

Pull Request - State: closed - Opened by dvm-shlee 8 months ago

#160 - Simplifying and Reducing brkrecon submodule

Issue - State: closed - Opened by timwahoo 8 months ago - 2 comments
Labels: enhancement

#159 - Missing buttons and image preview display when running in Apptainer

Issue - State: closed - Opened by pcamach2 8 months ago - 5 comments

#158 - Adding brkrecon CLI and minor updates

Pull Request - State: closed - Opened by timwahoo 8 months ago

#157 - Brkraw CLI for bruker recon of simple cartesian sequences (FLASH, MGE, RARE)

Issue - State: open - Opened by timwahoo 8 months ago - 5 comments
Labels: enhancement

#156 - Integration of Brkraw into Neurodesktop

Issue - State: closed - Opened by timwahoo 9 months ago - 3 comments

#155 - Streamlining Data Operations in Brkraw: Introducing 'PvScan' and 'PvReco' for Enhanced Raw Data Management.

Issue - State: closed - Opened by dvm-shlee 9 months ago - 1 comment
Labels: enhancement

#154 - GUI Unable to open PV7 and PV360 zip files

Issue - State: closed - Opened by timwahoo 10 months ago - 6 comments

#153 - Compressed Sensing Reconstruction for Undersampled Cartesian Sequences PV360.3.3<

Issue - State: open - Opened by timwahoo 10 months ago
Labels: enhancement

#152 - Reconstruction functions for linearly acquired cartesian sequences

Pull Request - State: closed - Opened by timwahoo 10 months ago - 1 comment
Labels: enhancement

#151 - Updates for version string and test scripts for github action

Pull Request - State: closed - Opened by dvm-shlee 10 months ago

#150 - Revert "Minor update"

Pull Request - State: closed - Opened by dvm-shlee 10 months ago

#149 - Minor update

Pull Request - State: closed - Opened by dvm-shlee 10 months ago

#148 - Regular Bruker recon tools from raw fid

Issue - State: closed - Opened by timwahoo 10 months ago - 2 comments
Labels: enhancement, good first issue

#147 - version string update

Pull Request - State: closed - Opened by dvm-shlee 10 months ago

#146 - Upcoming Major Update 0.4.0: Scheduled for Mid May 2024

Issue - State: open - Opened by dvm-shlee 10 months ago - 3 comments
Labels: Notice

#145 - Bids_helper quits when method file is missing

Issue - State: open - Opened by mschneider1711 10 months ago - 1 comment
Labels: enhancement

#144 - Bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#143 - The `--output` parameter cannot control the file name (additional elements get auto-added so you need to concatenate with mv to actually get the filenames you want...)

Issue - State: open - Opened by TheChymera almost 1 year ago - 1 comment
Labels: bug

#142 - Convert specific file via CLI

Issue - State: open - Opened by TheChymera almost 1 year ago - 4 comments
Labels: enhancement

#141 - Jupyter notebook tutorial gives FileNotValid error

Issue - State: open - Opened by jonathan-columbiau about 1 year ago - 2 comments
Labels: bug

#140 - Fails conversion with tonii_all

Issue - State: open - Opened by mschneider1711 about 1 year ago - 8 comments
Labels: bug

#139 - Bump actions/checkout from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#138 - Bump actions/setup-python from 2 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#137 - Citation

Pull Request - State: closed - Opened by Remi-Gau about 1 year ago

#136 - [MAINT] update docker dev recipe

Pull Request - State: closed - Opened by Remi-Gau about 1 year ago

#135 - consider moving the doc within package repo

Issue - State: open - Opened by Remi-Gau about 1 year ago - 1 comment
Labels: enhancement

#134 - [MAINT] update GHA workflow for tests

Pull Request - State: closed - Opened by Remi-Gau about 1 year ago - 4 comments

#133 - [MAINT] remove contributing

Pull Request - State: closed - Opened by Remi-Gau about 1 year ago

#132 - Sourcery refactoring suggestions

Issue - State: open - Opened by Remi-Gau about 1 year ago - 1 comment
Labels: enhancement

#131 - [MAINT] Flake8

Pull Request - State: closed - Opened by Remi-Gau about 1 year ago

#130 - use a citation.cff file to keep track of metadata to be ingested by zenodo upon release

Issue - State: closed - Opened by Remi-Gau about 1 year ago

#129 - automate the build of the docker image

Issue - State: closed - Opened by Remi-Gau about 1 year ago - 1 comment

#128 - duplicate "contributing" file

Issue - State: closed - Opened by Remi-Gau about 1 year ago

#127 - add some style guide lines

Issue - State: open - Opened by Remi-Gau about 1 year ago - 1 comment
Labels: enhancement

#126 - modernize packaging

Issue - State: closed - Opened by Remi-Gau about 1 year ago

#125 - automated test in CI: bring them back online

Issue - State: closed - Opened by Remi-Gau about 1 year ago - 2 comments

#124 - BIDS - Computation of SliceTiming

Issue - State: open - Opened by gjpcbecq over 1 year ago - 2 comments
Labels: bug

#123 - add options to switch subject/session/study IDs

Pull Request - State: closed - Opened by eugenegkim over 1 year ago

#122 - switch study_id and session_id

Pull Request - State: closed - Opened by eugenegkim over 1 year ago - 1 comment

#121 - add new bids tags

Pull Request - State: closed - Opened by eugenegkim over 1 year ago

#120 - fix bids_helper output name

Pull Request - State: closed - Opened by eugenegkim over 1 year ago

#119 - Output None for inexistent parameter

Pull Request - State: closed - Opened by jeremie-fouquet over 1 year ago - 6 comments

#118 - A few small changes

Pull Request - State: closed - Opened by eugenegkim over 1 year ago - 3 comments

#117 - Reconstruction functions for fully Sampled GRE, RARE, and MSME for PV360

Pull Request - State: closed - Opened by timwahoo over 1 year ago - 2 comments