Ecosyste.ms: Issues

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GitHub / BodenmillerGroup/imcRtools issues and pull requests

#12 - Add function to compensate images

Issue - State: closed - Opened by nilseling almost 4 years ago - 1 comment

#11 - Add function to compute minimum distance between each cell and a certain pattern

Issue - State: closed - Opened by nilseling almost 4 years ago - 1 comment

#10 - Reforging of the package

Pull Request - State: closed - Opened by PierreBSC almost 4 years ago - 1 comment

#9 - Add plotting functions for spatial coordinates and graphs

Issue - State: closed - Opened by nilseling almost 5 years ago - 2 comments

#8 - Implement spatial compensation approach from CODEX paper

Issue - State: closed - Opened by nilseling about 5 years ago - 1 comment

#7 - Implement existing spatial analysis methods

Issue - State: closed - Opened by nilseling about 5 years ago - 4 comments

#6 - Reimplement Rphenograph

Issue - State: closed - Opened by nilseling about 5 years ago - 1 comment
Labels: to be discussed

#4 - Switch to SingleCellLoomExperiment

Issue - State: closed - Opened by nilseling about 5 years ago - 2 comments

#3 - Write LoomGraph to igraph object

Issue - State: closed - Opened by nilseling about 5 years ago - 1 comment

#2 - Rewrite neighbouRhood

Issue - State: closed - Opened by nilseling about 5 years ago - 1 comment

#1 - Create coordinates generic function

Issue - State: closed - Opened by nilseling about 5 years ago - 1 comment