Ecosyste.ms: Issues

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GitHub / BlueBrain/voxcell issues and pull requests

#33 - Add the VoxelData.value_to_indices() method

Pull Request - State: closed - Opened by adrien-berchet 3 months ago - 2 comments

#32 - Add RegionMap.from_dataframe() and RegionMap.as_dict() methods

Pull Request - State: closed - Opened by adrien-berchet 3 months ago - 5 comments

#31 - Add unravel method to ValueToIndexVoxels

Pull Request - State: closed - Opened by eleftherioszisis 3 months ago - 1 comment

#30 - Add ValueToIndexVoxels to simplify using indices instead of masks

Pull Request - State: closed - Opened by mgeplf 5 months ago - 1 comment

#29 - Updating copyright year 2024

Pull Request - State: closed - Opened by bbpgithubaudit 5 months ago - 1 comment

#28 - remove pkg_resources, use importlib; update github actions

Pull Request - State: closed - Opened by mgeplf 5 months ago - 1 comment

#27 - Fix warnings

Pull Request - State: closed - Opened by eleftherioszisis 10 months ago - 1 comment

#26 - Hierarchy grouper v2

Pull Request - State: open - Opened by GianlucaFicarelli 12 months ago - 1 comment

#25 - Update read the docs

Pull Request - State: closed - Opened by mgeplf 12 months ago - 1 comment

#24 - update ci

Pull Request - State: closed - Opened by mgeplf 12 months ago - 1 comment

#23 - Add region_map.get_common_node_groups to help group nodes with the sa…

Pull Request - State: open - Opened by mgeplf 12 months ago - 2 comments

#22 - Add support for "Alternate Views" in RegionMap

Issue - State: open - Opened by mgeplf about 1 year ago

#21 - upgrade to pandas 2.0 groupby

Pull Request - State: closed - Opened by edasubert about 1 year ago - 2 comments

#20 - error-in-out-of-bounds-lookup-with-non-scalar-voxeldata

Pull Request - State: closed - Opened by edasubert about 1 year ago - 1 comment

#19 - Error in out-of-bounds lookup with non-scalar VoxelData

Issue - State: closed - Opened by seirios about 1 year ago - 9 comments

#18 - Add VoxelData subclasses

Pull Request - State: closed - Opened by mgeplf over 1 year ago - 1 comment

#17 - Switch hemisphere constants to be in line with AIBS

Pull Request - State: closed - Opened by mgeplf over 1 year ago

#16 - Ensure bbox is correct for negative voxel dimensions

Pull Request - State: closed - Opened by eleftherioszisis over 1 year ago - 1 comment

#15 - add children_count to region_map.as_dataframe()

Pull Request - State: closed - Opened by mgeplf over 1 year ago

#14 - Harvest the categorical power in `CellCollection.save_sonata`

Pull Request - State: closed - Opened by eleftherioszisis over 1 year ago

#13 - Regions

Issue - State: closed - Opened by dkeller9 over 1 year ago - 2 comments

#12 - Citation section and badge added

Pull Request - State: closed - Opened by alex4200 almost 2 years ago - 1 comment

#11 - Add a function to compute the spatial intersection of a segment with a VoxelData object

Pull Request - State: closed - Opened by adrien-berchet almost 2 years ago - 3 comments

#10 - Allow usage of pathlib.Path in VoxelData.save_nrrd

Pull Request - State: closed - Opened by eleftherioszisis about 2 years ago - 1 comment

#9 - Update README.rst

Pull Request - State: closed - Opened by alex4200 about 2 years ago

#8 - more example

Pull Request - State: closed - Opened by mgeplf about 2 years ago

#7 - added examples, cleaned up BBP-isms in documentation

Pull Request - State: closed - Opened by mgeplf about 2 years ago

#6 - Create a pandas dataframe from an region_map hierarchy

Pull Request - State: closed - Opened by mgeplf about 2 years ago - 1 comment

#5 - Add a function to compute the spatial intersection of a segment with a VoxelData object

Pull Request - State: closed - Opened by adrien-berchet about 2 years ago - 12 comments

#4 - remove some of the pylint exceptions, fix the resulting style errors

Pull Request - State: closed - Opened by mgeplf about 2 years ago - 1 comment

#3 - fix auto number conversion in github actions

Pull Request - State: closed - Opened by mgeplf about 2 years ago

#2 - Teach CellCollection about multiple node populations in sonata

Pull Request - State: closed - Opened by mgeplf about 2 years ago - 1 comment

#1 - Updating copyright year 2022

Pull Request - State: closed - Opened by bbpgithubaudit about 2 years ago - 1 comment