Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / BlueBrain/nexus-forge issues and pull requests

#423 - add query params when getting metadata

Pull Request - State: closed - Opened by ssssarah 30 days ago - 1 comment

#422 - Support loading PropertyShape-s in RdfModel

Issue - State: open - Opened by ssssarah about 1 month ago

#421 - When distribution contentType and File contentType mismatch, silently fails

Issue - State: open - Opened by ssssarah about 2 months ago
Labels: bug

#420 - Simplify retrieve

Pull Request - State: open - Opened by ssssarah 2 months ago - 1 comment

#419 - Catch timeout errors for asyncio requests + set timeout value

Pull Request - State: closed - Opened by ssssarah 3 months ago - 1 comment
Labels: enhancement

#418 - Parallelize validate

Pull Request - State: closed - Opened by ssssarah 3 months ago - 2 comments
Labels: enhancement

#416 - Use `schema_id` in `prepare_update`

Pull Request - State: closed - Opened by crisely09 3 months ago - 1 comment

#415 - Check for schema id to use schema endpoint

Pull Request - State: closed - Opened by crisely09 3 months ago - 1 comment

#414 - Use schema endpoint to register schemas

Issue - State: closed - Opened by crisely09 3 months ago - 1 comment
Labels: enhancement

#413 - rewrite uri as static method

Pull Request - State: closed - Opened by ssssarah 3 months ago - 1 comment

#412 - Allow loading local schemas for testing validation

Issue - State: open - Opened by eleftherioszisis 4 months ago - 1 comment
Labels: enhancement

#411 - Fix readthedocs yml connfig error: Value build not found

Pull Request - State: closed - Opened by MFSY 4 months ago

#410 - Added v0.8.2 release notes

Pull Request - State: closed - Opened by MFSY 4 months ago

#409 - Fix org and project metadata

Pull Request - State: closed - Opened by crisely09 4 months ago - 1 comment

#408 - File fetch

Pull Request - State: closed - Opened by ssssarah 4 months ago - 1 comment

#407 - rm nexus sdk usage and dependency

Pull Request - State: closed - Opened by ssssarah 4 months ago - 2 comments

#406 - Add method when initializing forge to export pyshacl environment variable

Pull Request - State: closed - Opened by crisely09 4 months ago - 1 comment

#405 - Update prod-forge-nexus.yml for species vs strain resolving

Pull Request - State: closed - Opened by NicoRicardi 4 months ago - 3 comments

#404 - Add alternateName to agent resolver

Pull Request - State: closed - Opened by crisely09 5 months ago - 1 comment

#401 - Expand jsonld context in load_resource_graph_from_source

Pull Request - State: closed - Opened by MFSY 5 months ago - 1 comment

#400 - Increased request timeout constant

Pull Request - State: closed - Opened by MFSY 5 months ago - 1 comment

#399 - propagate inference to model when forge.validate

Pull Request - State: closed - Opened by ssssarah 5 months ago - 1 comment

#397 - fix search when looking for a literal to be unequal to a value

Pull Request - State: closed - Opened by ssssarah 5 months ago - 1 comment

#396 - Validation with ontology

Pull Request - State: closed - Opened by MFSY 6 months ago

#395 - improved deflatten function (lower time complexity)

Pull Request - State: closed - Opened by NicoRicardi 6 months ago - 3 comments

#394 - Fixed coupled of issues

Pull Request - State: closed - Opened by MFSY 6 months ago - 1 comment

#393 - Fixes deep nodeshape path eval error

Pull Request - State: closed - Opened by MFSY 7 months ago - 5 comments

#392 - reset resolver sparql view to default, change store sparql view to aggregated

Pull Request - State: closed - Opened by ssssarah 7 months ago - 1 comment

#391 - Use as default Aggregate SPARQL view

Pull Request - State: closed - Opened by crisely09 7 months ago

#390 - Dataset from Resource doesn't keep LazyActions

Issue - State: open - Opened by crisely09 7 months ago
Labels: bug, Dataset

#389 - Add `add_image` method to `Dataset` entity

Pull Request - State: closed - Opened by crisely09 7 months ago - 12 comments

#388 - Missing forge method to add images to resources

Issue - State: closed - Opened by crisely09 7 months ago - 2 comments
Labels: enhancement

#387 - Set jsonld context version to 1.1

Pull Request - State: closed - Opened by MFSY 7 months ago - 1 comment

#386 - Context does not resolve NCBITaxon terms.

Issue - State: closed - Opened by eleftherioszisis 7 months ago - 6 comments

#385 - Failed download does not set any _last_action

Issue - State: open - Opened by NicoRicardi 8 months ago
Labels: bug

#384 - Batch retrieve

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#383 - Refactor batch request mechanism

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#382 - return resources as dictionaries when forge.elastic if as_resource = False

Pull Request - State: closed - Opened by ssssarah 8 months ago - 3 comments

#381 - re-do metadata fetch until endpoint is fixed

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#380 - Parallelize retrieve

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#379 - Improved deflatten function

Pull Request - State: closed - Opened by NicoRicardi 8 months ago - 8 comments

#377 - resolving returns also the hasleafregionpart attribute of the resource

Pull Request - State: closed - Opened by NicoRicardi 8 months ago - 1 comment

#376 - Rm metadata fetch when forge.retrieve

Pull Request - State: closed - Opened by ssssarah 8 months ago - 2 comments

#375 - Fix filter exception on search

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#374 - Update resource schema

Pull Request - State: closed - Opened by ssssarah 8 months ago - 1 comment

#373 - Pass view when forge.sparql, forge.elastic, forge.search call

Pull Request - State: closed - Opened by ssssarah 8 months ago - 8 comments

#372 - forge._model.schema_id is bucket dependent

Issue - State: open - Opened by lecriste 9 months ago
Labels: bug

#371 - Propagating exceptions from executed actions

Issue - State: open - Opened by kshalot 9 months ago
Labels: enhancement

#370 - Load local configuration when configuration tests

Pull Request - State: closed - Opened by ssssarah 9 months ago - 3 comments

#369 - Unexpected behaviour of forge.validate

Issue - State: closed - Opened by NicoRicardi 9 months ago - 3 comments
Labels: bug

#368 - added timeouts to every requests. call

Pull Request - State: closed - Opened by ssssarah 9 months ago - 3 comments

#367 - Add forge methods to acces/query datasets from external sources

Pull Request - State: open - Opened by crisely09 10 months ago
Labels: Dataset

#366 - Add WebServiceStore to query/search in external databases

Pull Request - State: open - Opened by crisely09 10 months ago - 1 comment

#365 - Better definition of the default Mapping and Mapper of KnowledgeGraphForge

Issue - State: open - Opened by ssssarah 10 months ago
Labels: invalid

#364 - fix missing abstract methods in entity linking sklearn

Pull Request - State: closed - Opened by ssssarah 10 months ago

#363 - fix missing abstract methods in entity linker

Pull Request - State: closed - Opened by ssssarah 10 months ago

#362 - Fix cyclic dependency between Mapping and KnowledgeGraphForge

Pull Request - State: closed - Opened by ssssarah 10 months ago - 1 comment

#361 - Fix resolver context

Pull Request - State: closed - Opened by crisely09 10 months ago - 1 comment

#360 - SPARQLStore specialization

Pull Request - State: closed - Opened by crisely09 11 months ago - 1 comment

#358 - Use prepare uri when deprecating resources

Pull Request - State: closed - Opened by ssssarah 11 months ago - 1 comment

#357 - Add optional context to register/update operations

Pull Request - State: open - Opened by ssssarah 11 months ago - 1 comment

#356 - Increase evaluation path limit

Pull Request - State: closed - Opened by ssssarah 11 months ago - 4 comments

#355 - More linting

Pull Request - State: closed - Opened by ssssarah 11 months ago - 3 comments

#354 - return None if pretty in model archetype

Pull Request - State: closed - Opened by ssssarah 11 months ago - 4 comments

#353 - Archetypes for external datasets

Pull Request - State: closed - Opened by crisely09 11 months ago - 3 comments

#352 - pycodestyle

Pull Request - State: closed - Opened by ssssarah 11 months ago - 5 comments

#351 - Model querying, loading local ontology in memory

Pull Request - State: open - Opened by ssssarah 11 months ago - 2 comments

#349 - Multi store

Pull Request - State: closed - Opened by ssssarah 12 months ago - 1 comment

#348 - Refactor services

Pull Request - State: closed - Opened by ssssarah 12 months ago - 3 comments

#347 - add schema id missing parameter in _update_one of demo store

Pull Request - State: closed - Opened by ssssarah 12 months ago

#346 - Demo store doesn't implement properly method of parent class Store

Issue - State: closed - Opened by ssssarah 12 months ago
Labels: bug

#345 - Configuration paths from getting started notebooks are outdated

Issue - State: closed - Opened by ssssarah 12 months ago - 1 comment
Labels: bug

#344 - mapping loading with mapping type specified or different method name

Pull Request - State: closed - Opened by ssssarah 12 months ago - 1 comment

#343 - Filter takes str as input for the operator, not FilterOperator

Issue - State: closed - Opened by ssssarah 12 months ago
Labels: invalid

#341 - Added build_resource_from_response method in SPARQLQueryBuilder

Pull Request - State: closed - Opened by MFSY about 1 year ago

#340 - Fixed SPARQL resolving results parsing using nt. XML datatype parsing was incorrect

Pull Request - State: closed - Opened by MFSY about 1 year ago - 1 comment

#339 - Adding Databases object

Pull Request - State: open - Opened by crisely09 about 1 year ago - 2 comments

#338 - Upgrade pyshacl and replace Validator with validate function

Pull Request - State: closed - Opened by crisely09 about 1 year ago - 4 comments

#337 - Add extra field to the ontology resolver template and mapping.

Pull Request - State: closed - Opened by crisely09 about 1 year ago

#336 - Add mappings from PR #273

Pull Request - State: closed - Opened by crisely09 about 1 year ago - 1 comment

#335 - Expose to_symbol, expand for URIs instead of going through the model's context to do it

Issue - State: closed - Opened by ssssarah about 1 year ago - 2 comments
Labels: enhancement

#334 - Enable querying to ES with _source = False or fewer fields, and no Resource creation

Issue - State: open - Opened by ssssarah about 1 year ago - 1 comment
Labels: enhancement

#333 - Store initialization configuration in forge object

Pull Request - State: closed - Opened by crisely09 about 1 year ago

#331 - BlueBrainNexusStore: fix updating schemas

Pull Request - State: closed - Opened by MFSY about 1 year ago - 1 comment

#329 - Add CLA section to contributing documentation file.

Pull Request - State: closed - Opened by crisely09 about 1 year ago - 1 comment

#328 - Consider failing by default when tagging a deprecated resource

Issue - State: open - Opened by MFSY about 1 year ago

#327 - BlueBrainNexusStore: fix tagging schemas

Pull Request - State: closed - Opened by MFSY about 1 year ago - 1 comment

#326 - Added project configuration for neurosciencegraph/datamodels

Pull Request - State: closed - Opened by crisely09 about 1 year ago - 2 comments

#324 - Added Github action and codecov badges

Pull Request - State: closed - Opened by MFSY about 1 year ago - 1 comment