Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / BlueBrain/Brion issues and pull requests

#357 - Update highfive and add to gitignore

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#356 - Update libsonata to 0.1.22

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#355 - Improve GLM linking for any version

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#354 - BRAYNS 557 - Fix sonata synapses

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#353 - Update copyright year in README.md

Pull Request - State: closed - Opened by jplanasc over 1 year ago

#352 - 3.3.10 Release

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#351 - Fix glm linking

Pull Request - State: closed - Opened by NadirRoGue over 1 year ago

#350 - 3.3.9 Release preparation

Pull Request - State: closed - Opened by NadirRoGue about 2 years ago

#349 - Update libsonata and Highfive to latest releases. Removes meshHDF5

Pull Request - State: closed - Opened by NadirRoGue about 2 years ago

#348 - Updating copyright year 2022

Pull Request - State: closed - Opened by bbpgithubaudit over 2 years ago

#347 - remove me being specified twice in AUTHORS.txt

Pull Request - State: closed - Opened by mgeplf over 2 years ago - 1 comment

#346 - Update AUTHORS.txt

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#345 - Fix currentDir handling

Pull Request - State: closed - Opened by mgeplf over 2 years ago - 2 comments

#344 - 3.3.8 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#343 - Updates dependencies and code:

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#342 - 3.3.7 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#341 - Updates GLM submodule:

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#340 - 3.3.6 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago

#339 - 3.3.6 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 2 years ago - 2 comments

#338 - 3.3.5 Release Preparation

Pull Request - State: closed - Opened by NadirRoGue almost 3 years ago

#337 - CMake: remove explicit setting of USE_PYTHON_VERSION.

Pull Request - State: closed - Opened by matz-e almost 3 years ago - 1 comment

#336 - Changing CMake files after configuring leads to build failure

Issue - State: closed - Opened by matz-e almost 3 years ago

#335 - Fix range-loop-construct warnings.

Pull Request - State: closed - Opened by matz-e almost 3 years ago - 1 comment

#334 - CMake: add Python 3.9 and 3.10

Pull Request - State: closed - Opened by matz-e almost 3 years ago - 3 comments

#333 - Fix morphio cmake condition

Pull Request - State: closed - Opened by NadirRoGue almost 3 years ago

#332 - Improving submodule handling. Fix morphio aliasing

Pull Request - State: closed - Opened by NadirRoGue almost 3 years ago

#331 - Removed unnecessary export

Pull Request - State: closed - Opened by NadirRoGue almost 3 years ago

#330 - Update README.md

Pull Request - State: closed - Opened by jplanasc almost 3 years ago

#329 - Fix license file to be recognized by GitHub

Pull Request - State: closed - Opened by jplanasc almost 3 years ago

#328 - Create AUTHORS.txt

Pull Request - State: closed - Opened by jplanasc almost 3 years ago

#327 - 3.3.4 Release Preparation

Pull Request - State: closed - Opened by NadirRoGue about 3 years ago - 1 comment

#326 - Add extra checks to choose the appropiate synapse handling class

Pull Request - State: closed - Opened by NadirRoGue about 3 years ago

#325 - 3.3.3 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#324 - Sort returned SONATA report values by node id

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#323 - Adds warning message about using Brion to read SONATA format

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#322 - Update funding and copyright notice

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago - 1 comment

#320 - Allow tabs '\t' as key - value separator in BlueConfig

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#318 - General submodules update:

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago - 2 comments

#317 - Custom BlueConfig file support for multipopulation

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#316 - Fix blueconfig class to follow documentation on morphology path

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#315 - installation failure on MacOS

Issue - State: closed - Opened by asanin-epfl over 3 years ago - 14 comments

#314 - 3.3.1 Release preparation

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#313 - Improve error message for GIDs out of range in report

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#312 - Handling MorphologyType from BlueConfig

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago

#311 - Handle 0 based GIDs on sonata files

Pull Request - State: closed - Opened by NadirRoGue over 3 years ago - 3 comments

#310 - Fixes and updates

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago

#309 - Use env vars for setting PYTHON3_ROOT_DIR (wheel distribution)

Pull Request - State: closed - Opened by ppodhajski almost 4 years ago - 1 comment

#308 - Segfault in brain::neuron::Soma::getProfilePoints

Issue - State: open - Opened by mgeplf almost 4 years ago - 5 comments

#307 - Updating version to 3.3.0

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago - 1 comment

#306 - Fix for wrongly load check in synapse positions

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago

#305 - Preparation for 3.3.0 release.

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago

#304 - Rename brain python package to brion

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago - 5 comments

#303 - Improve SONATA synapse support

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago

#302 - Fix glm targets not installed properly

Pull Request - State: closed - Opened by NadirRoGue almost 4 years ago - 3 comments

#301 - Versioned in `glm` isn't exported by the `BrionConfig.cmake`

Issue - State: closed - Opened by mgeplf almost 4 years ago - 4 comments

#300 - Initial commit for python wheel distribution

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago - 2 comments

#299 - Removing unused functions from old SONATA circuit implementation

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago

#298 - Support relative paths

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago

#297 - Sonatacircuit support

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago - 2 comments

#296 - Can't install on Mac OS Mohave

Issue - State: closed - Opened by asanin-epfl about 4 years ago - 13 comments

#295 - Fixes and updates:

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago

#294 - update travis

Pull Request - State: closed - Opened by ppodhajski about 4 years ago

#293 - Fix bug when the mcombo file is empty

Pull Request - State: closed - Opened by NadirRoGue about 4 years ago - 3 comments

#292 - Wrong values returned when reading soma.bbp report

Issue - State: closed - Opened by seirios about 4 years ago - 1 comment

#291 - Python 3.8 and beyond wheels

Issue - State: closed - Opened by wvangeit about 4 years ago - 10 comments

#290 - Replacing Morphology readers and tests with MorphIO

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 1 comment

#289 - Update README.md

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#288 - Update mvdtool

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 2 comments

#287 - Fix for wrong file access mode

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#286 - Fix cmake build with newer boost, python and cmake version. Fix tests

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#285 - Attempt to fix Intel compile errors

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 1 comment

#284 - Fix installation structure from CMake

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#283 - Preparation for 3.2.0 release:

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#282 - Few fixes related to glm:

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#281 - Stripped CMake/common (with Pydoxygen and Servus)

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 3 comments

#280 - Bumping libsonata module

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 6 comments

#279 - Stripping lunchbox from Brion

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#278 - Stripping vmmlib from Brion. Replaced with GLM

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 2 comments

#277 - Libsonata cmake

Pull Request - State: closed - Opened by ppodhajski over 4 years ago

#276 - Strip vmmlib lib from Brion

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 3 comments

#275 - Stripping Keyv lib from Brion

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago - 2 comments

#274 - Fix data_converter of std::vector of vmml::vector

Pull Request - State: closed - Opened by alkino over 4 years ago - 2 comments

#273 - Fix to compile against libsonata

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#272 - Lazy loading CompartmentReport before subprocess hangs

Issue - State: open - Opened by antonelepfl over 4 years ago

#271 - Minor fixes and changes

Pull Request - State: closed - Opened by NadirRoGue over 4 years ago

#270 - Fix for wrong efferent/afferent synapse report on Sonata Implementation

Pull Request - State: closed - Opened by NadirRoGue almost 5 years ago

#269 - Introduce SONATA support

Pull Request - State: closed - Opened by ppodhajski almost 5 years ago - 3 comments

#268 - Sonatahotfix

Pull Request - State: closed - Opened by NadirRoGue almost 5 years ago

#267 - Fix for sonata cmake link

Pull Request - State: closed - Opened by NadirRoGue almost 5 years ago

#266 - Sonata includes fix

Pull Request - State: closed - Opened by NadirRoGue almost 5 years ago

#265 - Hot fix to read sonata generated circuits

Pull Request - State: closed - Opened by NadirRoGue almost 5 years ago

#263 - Detect start.target in CircuitPath

Pull Request - State: closed - Opened by karjonas about 5 years ago

#261 - Detect `start.target` in CircuitPath

Issue - State: closed - Opened by arsenius7 over 5 years ago

#260 - Re-use `libsonata` for accessing SONATA node / edge populations

Issue - State: closed - Opened by arsenius7 over 5 years ago - 1 comment

#258 - Bugfix in morphology recentering

Pull Request - State: closed - Opened by hernando over 5 years ago

#253 - Adapt SONATA report readers to latest spec change

Issue - State: closed - Opened by hernando almost 6 years ago - 2 comments

#248 - `brain.CompartmentView.load` hangs on low-memory machine

Issue - State: closed - Opened by arsenius7 almost 6 years ago - 1 comment