Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / BlueBrain/BluePyEfe issues and pull requests

#194 - feat: repetitions support for ScalaNWBReader

Pull Request - State: closed - Opened by ilkilic 17 days ago - 1 comment

#193 - fix freq indexing in impedance plotting

Pull Request - State: closed - Opened by AurelienJaquier about 2 months ago

#192 - Put output pickle path into fetachable functions

Pull Request - State: closed - Opened by AurelienJaquier about 2 months ago - 1 comment

#191 - fix license in zenodo json

Pull Request - State: closed - Opened by AurelienJaquier 2 months ago

#190 - update license date

Pull Request - State: closed - Opened by AurelienJaquier 2 months ago

#189 - Impedance plot

Pull Request - State: closed - Opened by AurelienJaquier 2 months ago

#188 - suppress import cycle warnings from sphinx

Pull Request - State: closed - Opened by AurelienJaquier 3 months ago

#187 - pass also current to efel

Pull Request - State: closed - Opened by AurelienJaquier 3 months ago - 1 comment

#186 - fix typo in SineSpec

Pull Request - State: closed - Opened by AurelienJaquier 3 months ago

#185 - fix ascii art in docs

Pull Request - State: closed - Opened by AurelienJaquier 3 months ago

#184 - Fix warnings in sphinx and enforce tox to fail on warnings

Pull Request - State: closed - Opened by AurelienJaquier 3 months ago

#183 - allow stimulus_description in ScalaNWBReader

Pull Request - State: closed - Opened by darshanmandge 4 months ago - 4 comments

#181 - adding sponthold and spontnohold ecodes

Pull Request - State: closed - Opened by AurelienJaquier 4 months ago

#180 - Capitalization of protocol names

Issue - State: closed - Opened by AurelienJaquier 4 months ago - 1 comment

#179 - Update unit tests

Pull Request - State: closed - Opened by ilkilic 5 months ago - 1 comment

#178 - Update eFEL deprecated functions calls

Pull Request - State: closed - Opened by ilkilic 5 months ago

#177 - handle None values in compute_efeatures

Pull Request - State: closed - Opened by ilkilic 5 months ago

#176 - use all available cores in feature extraction

Pull Request - State: open - Opened by anilbey 6 months ago - 2 comments

#175 - prevent filename being None in Cell

Pull Request - State: closed - Opened by darshanmandge 6 months ago - 1 comment

#174 - select nwb traces according to v_file field

Pull Request - State: closed - Opened by AurelienJaquier 7 months ago - 3 comments

#173 - In-page pdf pagination for recording figures

Pull Request - State: closed - Opened by ilkilic 8 months ago

#172 - Add pagination to plot_recordings

Pull Request - State: closed - Opened by ilkilic 8 months ago - 2 comments

#171 - Fix tests import error

Pull Request - State: closed - Opened by ilkilic 8 months ago - 1 comment

#170 - fix typo

Pull Request - State: closed - Opened by AurelienJaquier 8 months ago - 1 comment

#169 - Fix NaN in JSON Feature

Pull Request - State: closed - Opened by ilkilic 8 months ago - 1 comment

#168 - Add unit tests for lccr_csv reader

Pull Request - State: closed - Opened by ilkilic 9 months ago - 1 comment

#167 - Refactor 'amp' and 'hypamp' variables in Step for correct unit conversion

Pull Request - State: closed - Opened by ilkilic 9 months ago - 2 comments

#166 - Add reader for LCCR csv

Pull Request - State: closed - Opened by ilkilic 9 months ago - 1 comment

#165 - Make BluePyEfe compatible with numpy2

Pull Request - State: closed - Opened by AurelienJaquier 9 months ago - 1 comment

#164 - Add CITATION.cff

Pull Request - State: closed - Opened by ilkilic 10 months ago

#163 - Add a new test for sAHP extraction

Pull Request - State: closed - Opened by AurelienJaquier 10 months ago - 1 comment

#162 - Fix bug in protocol.py

Pull Request - State: closed - Opened by AurelienJaquier 10 months ago - 1 comment

#161 - ecodes with amp2 output fix

Pull Request - State: closed - Opened by AurelienJaquier 10 months ago - 1 comment

#160 - Force evaluation for built-in map()

Pull Request - State: closed - Opened by ilkilic 12 months ago - 1 comment

#159 - modify step threshold in step detection of sAHP

Pull Request - State: closed - Opened by AurelienJaquier about 1 year ago - 2 comments

#158 - tag and release at each push to master

Pull Request - State: closed - Opened by AurelienJaquier about 1 year ago - 1 comment

#157 - add gh workflow to sync to ebrains mirror at each push

Pull Request - State: closed - Opened by AurelienJaquier about 1 year ago - 1 comment

#156 - Readthedocs install

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#155 - Make readthedocs install bluepyefe

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#154 - fix conf.py path in .readthedocs.yml

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#153 - add readthedocs.yml file

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#152 - use sphinx theme and README in documentation

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#151 - Turn readme from .md into .rst

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 2 comments

#150 - update branch of gh-action-pypi-publish action

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#149 - Use BBP doc template

Issue - State: closed - Opened by wvangeit over 1 year ago - 2 comments

#148 - Fix typos in example notebooks

Pull Request - State: closed - Opened by pitmonticone over 1 year ago - 1 comment

#147 - Fixed error bar plot and add holding current to the recording plots

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 2 comments

#146 - remove spaced from units in igor_reader

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#145 - Use record auto_threshold when it is actually used

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#144 - Only compute auto_threshold if no threshold is provided

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#143 - Refactor nwb reader

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 5 comments

#142 - Add multi_stim_start and multi_stim_end to the efel_settings when

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#141 - adding spontaneous in ecode init

Pull Request - State: closed - Opened by darshanmandge over 1 year ago - 1 comment

#140 - Good to add more strict tests?

Issue - State: closed - Opened by arnaudon over 1 year ago - 1 comment

#139 - Fix smoothing for current amplitude detection

Pull Request - State: closed - Opened by arnaudon over 1 year ago - 18 comments

#138 - Save all feat values

Pull Request - State: closed - Opened by arnaudon over 1 year ago

#137 - Also pickles the targets/protocols

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#136 - first rough try to get better CI

Pull Request - State: closed - Opened by arnaudon over 1 year ago - 4 comments
Labels: dontmerge

#135 - Update README.md: fix broken link to ipynb

Pull Request - State: closed - Opened by anilbey over 1 year ago

#134 - Fix annyoing numpy warning

Pull Request - State: closed - Opened by arnaudon over 1 year ago

#133 - Add linting/black

Issue - State: closed - Opened by arnaudon over 1 year ago - 6 comments

#132 - add parallel plotting

Pull Request - State: closed - Opened by arnaudon over 1 year ago - 4 comments

#131 - Recording: extract set_autothreshold as a method

Pull Request - State: closed - Opened by anilbey over 1 year ago

#129 - Fix step detection

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#128 - Use maintained igor2 instead of unmaintained igor

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 2 comments

#127 - Display the auto-threshold when plotting a recording

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#126 - Fix sahp step detection

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#125 - Add stimulus representation in ecode docstrings

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#124 - Add step detection to sAHP

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#123 - Add python 3.11 tests to github workflow

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#122 - Improve step detection

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#121 - Improve the ticks markign the spikes in the plotting of the recordings

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#120 - Attempt at fixing auto-threshold

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#119 - force numpy<1.24 until igor is updated

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#118 - Add default std values to current extraction

Pull Request - State: closed - Opened by DrTaDa over 1 year ago

#117 - Explicit the value used as a default for the standard deviation

Pull Request - State: closed - Opened by DrTaDa over 1 year ago - 1 comment

#116 - Fix 'keep alive' workflow and tox4 fix

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 2 comments

#115 - Minor bug

Pull Request - State: closed - Opened by DrTaDa almost 2 years ago - 3 comments

#114 - Adds the ability to extract for absolute amplitude in addition to

Pull Request - State: closed - Opened by DrTaDa almost 2 years ago

#113 - enable syntax check in tox by default

Pull Request - State: closed - Opened by anilbey almost 2 years ago

#112 - Deprecate Python 3.6

Pull Request - State: closed - Opened by anilbey almost 2 years ago

#111 - Separate testing from building in github actions

Pull Request - State: closed - Opened by AurelienJaquier almost 2 years ago - 1 comment

#110 - FIX #94, compute and show coverage

Pull Request - State: closed - Opened by anilbey almost 2 years ago - 2 comments

#109 - Dummy commit to push bluepyefe2 to pypi

Pull Request - State: closed - Opened by wvangeit almost 2 years ago

#108 - Add Changelog.rst

Pull Request - State: closed - Opened by anilbey almost 2 years ago - 1 comment

#107 - in example notebook feature results differ when they are computed two times in a row

Issue - State: closed - Opened by anilbey almost 2 years ago - 2 comments

#106 - Check voltage

Pull Request - State: closed - Opened by DrTaDa almost 2 years ago - 1 comment

#105 - Create the directory for the output cells.pkl if it does not exist

Pull Request - State: closed - Opened by DrTaDa almost 2 years ago

#104 - Some update to the README and docstrings

Pull Request - State: closed - Opened by DrTaDa about 2 years ago

#103 - Fix

Pull Request - State: closed - Opened by DrTaDa about 2 years ago

#102 - Ad doc to BPE2

Pull Request - State: open - Opened by DrTaDa about 2 years ago - 1 comment

#101 - Rework the eCode classes to remove duplicate code

Pull Request - State: closed - Opened by DrTaDa about 2 years ago

#100 - Update the docstrings

Pull Request - State: closed - Opened by DrTaDa about 2 years ago - 1 comment

#99 - Update the docstrings

Pull Request - State: closed - Opened by DrTaDa about 2 years ago - 2 comments

#98 - BPE2: build and publish documentation

Issue - State: open - Opened by anilbey about 2 years ago - 9 comments

#97 - BPE2: address 'keywords' should be a list, got type 'tuple' warning

Pull Request - State: closed - Opened by anilbey about 2 years ago

#96 - address 'keywords' should be a list, got type 'tuple' warning

Pull Request - State: closed - Opened by anilbey about 2 years ago - 3 comments

#95 - Add a translator for legacy configs

Pull Request - State: closed - Opened by DrTaDa about 2 years ago - 3 comments