BlueBrain/BluePyEModel issues and pull requests

#81 - Use MorphIO to create placeholder morphology

Pull Request - State: closed - Opened by arnaudon over 1 year ago - 4 comments

#80 - Fix mechanisms directory check in Luigi Task

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#79 - Architecture detection for mechanisms and switch to .o file checking

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#78 - Add troubleshooting, Rename example folder to reduce path length

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#77 - New function to facilitate local to nexus upload

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#76 - Export all seeds in export_hoc script

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#75 - Add use_allen_notation argument in ouput path functions

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#74 - Remove gitignore step for the example

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#73 - Add export_hoc script

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#72 - New exception in example for when no data is found

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#71 - fix crash when there is no threshold current in the responses

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#70 - Refactor path_extract_config

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 2 comments

#69 - Brain region: use Allen notation in metadata string

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#68 - Fix the optimisation status display in the monitoring scripts

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#67 - add FCC id to EMW

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#66 - update banner link for pypi compatibility

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#65 - add stim_end to ProbAMPANMDA_EMS

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#64 - add ExportHoc as a EModelCreation dependency

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#63 - integrate ExportHoc into luigi workflow

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#62 - Project example overhaul

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 5 comments

#61 - Update not implemented functions' arguments

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#60 - Add EModelScript class

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#59 - give full efeatures & protocols examples in FCC docstring

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#58 - Specify the different formats recording_name should have

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#57 - Link EModelScript nexus ids to EModelWorkflow

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#56 - Update description

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 2 comments

#55 - Add ProbAMPANMDA_EMS ecode

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#54 - Use black & grey in optimisation plot

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#53 - More tests

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#52 - Add banner

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#51 - Remove unused 'test' entries in the example pyr.json

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 4 comments

#50 - test coverage

Issue - State: closed - Opened by AurelienJaquier over 1 year ago - 3 comments

#49 - test new error in EModel_pipeline init

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#48 - Add legacy data_access_point

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#47 - Remove recordings at locations outside of cell

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 3 comments

#46 - Nexus: don't set a default project

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#45 - fix poject spelling

Pull Request - State: closed - Opened by mgeplf over 1 year ago

#44 - use generations instead of evaluations in optimisation plot

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#43 - add possibility to change emodel name when exporting to hoc

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#42 - Polish doc

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#41 - fix get_emodel_workflow

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#40 - test

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#39 - make ttype and mtype optional luigi parameters

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#38 - h5 morphology loadable hoc template/export

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#37 - change autotargets to basic ones

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#36 - test

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#35 - Fix internal CI: run linting only

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#34 - Fix internal CI

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#33 - fix check_mettypes decorator

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#32 - Update setup.py metadata

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#31 - version 0.0.16

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#30 - Add Zenodo doi

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#29 - let the doc build with warnings

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#28 - Fix doc formatting

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 2 comments

#27 - Fix tox command

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#26 - Fix doc

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#25 - Add coverage

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#24 - Fix internal ci

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#23 - Fix the filename of the internal ci

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#22 - fix docs dependency

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#21 - Fix path for doc

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#20 - Update readme

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#19 - Add internal gitlab-ci

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 3 comments

#18 - Update readme

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#17 - fix schema

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#16 - Fix mechanism duplicates in emodelconfiguration nexus resource

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#15 - fix luigi warning #6

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#14 - fix EModelCreation

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 1 comment

#13 - Prepare for open-sourcing: update README

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#12 - fix emodel workflow in EModelCreation

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#11 - add missing license

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#10 - exclude .jinja files in linguist detection

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#9 - Fix test CI

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#8 - remove targets task requirement

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago

#7 - fix pop from empty list error in mechanism temperature

Pull Request - State: closed - Opened by AurelienJaquier over 1 year ago - 2 comments

#6 - luigi warning

Issue - State: closed - Opened by AurelienJaquier over 1 year ago

#5 - add CI release

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#4 - Fix readme + contributing

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

#3 - remove GitLab CI

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#2 - ignore .mod and .asc files in linguist

Pull Request - State: closed - Opened by ilkilic over 1 year ago

#1 - add CI testing

Pull Request - State: closed - Opened by ilkilic over 1 year ago - 1 comment

GitHub / BlueBrain/BluePyEModel issues and pull requests