Ecosyste.ms: Issues

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GitHub / Bioconductor/Rhtslib issues and pull requests

#37 - Unexpected EOF in archive, when installing via renv

Issue - State: open - Opened by fdekievit 3 months ago - 8 comments

#36 - Problem installing Rhtslib on renv

Issue - State: closed - Opened by xinguo1236 6 months ago - 1 comment

#35 - Properly link libhts deps

Pull Request - State: closed - Opened by jeroen 11 months ago - 5 comments

#34 - Installation error with Rhtslib

Issue - State: closed - Opened by balberti 12 months ago - 8 comments

#32 - Update htslib to 1.18 (was 1.15.1)

Pull Request - State: closed - Opened by hpages about 1 year ago

#31 - `R CMD check` warning on the `__sprintf_chk` symbol

Issue - State: closed - Opened by oleksii-nikolaienko almost 2 years ago - 11 comments

#30 - Please do not expose HTSlib's internal CRAM functions

Issue - State: closed - Opened by jmarshall over 2 years ago - 5 comments

#29 - Update htslib to 1.15.1 (was 1.7)

Pull Request - State: closed - Opened by hpages over 2 years ago

#28 - Rhtslib patch for new R 4.2 UCRT Toolchain

Issue - State: closed - Opened by jwokaty almost 3 years ago - 1 comment

#27 - No support for Makevars

Issue - State: closed - Opened by drkrynstrng about 3 years ago - 12 comments

#26 - Problem installing Rhtslib on renv

Issue - State: closed - Opened by clanna about 3 years ago - 4 comments

#25 - Bump version to avoid overwriting CRAM support

Pull Request - State: closed - Opened by ttriche over 3 years ago - 1 comment

#24 - problem of installing the package of "Rhtslib"

Issue - State: closed - Opened by qq80317453 over 3 years ago - 4 comments

#23 - Package install error

Issue - State: closed - Opened by Malvikakh over 3 years ago - 20 comments

#22 - error in install package

Issue - State: closed - Opened by gevin-MB over 3 years ago - 2 comments

#21 - Unable to install Rhtslib under Microsoft Open R 4.0.2

Issue - State: closed - Opened by dfermin over 3 years ago - 15 comments

#20 - lzma error when install

Issue - State: closed - Opened by shiyi-pan about 4 years ago - 8 comments

#19 - lzma

Issue - State: closed - Opened by shiyi-pan about 4 years ago - 1 comment

#18 - Error Installing package 'Rhtslib' in R 3.6.3

Issue - State: closed - Opened by nayaracleite over 4 years ago - 2 comments

#17 - New variables to find external packages

Pull Request - State: closed - Opened by glennpj almost 5 years ago - 1 comment

#16 - installation fails in conda environment that already contains htslib headers

Issue - State: closed - Opened by jgarthur almost 5 years ago - 3 comments

#15 - Force a compiler to use ~/.R/Makevars rather than r/3.6.2/lib/R/etc/Makeconf

Issue - State: closed - Opened by akhst7 almost 5 years ago - 3 comments

#14 - [Mac OS] Post-install test: Unable to load shared object

Issue - State: closed - Opened by PikalaxALT about 5 years ago - 2 comments

#13 - Failure to link to Rhtslib when library path contains spaces

Issue - State: closed - Opened by grimbough about 5 years ago - 11 comments

#12 - Rhtslib 1.16.2 cannot find libraries (R 3.6.1, Spack installation)

Issue - State: closed - Opened by jessepharrison about 5 years ago - 4 comments

#11 - Rhtslib can not find bzlib.h

Issue - State: closed - Opened by MajoroMask about 5 years ago - 8 comments

#10 - Respect R's CFLAGS and LDFLAGS

Pull Request - State: closed - Opened by kasperdanielhansen about 5 years ago - 6 comments

#9 - Cannot install Rhtslib from R in conda environment

Issue - State: closed - Opened by naumenko-sa over 5 years ago - 7 comments

#8 - Prevent overwriting of CFLAGS and LDFLAGS

Pull Request - State: closed - Opened by landesfeind over 5 years ago - 5 comments

#7 - CRAM support requires linking to libcurl

Issue - State: closed - Opened by mtmorgan over 5 years ago - 2 comments

#6 - Linking package fails R CMD check on Mac OS X

Issue - State: closed - Opened by lucasnell over 5 years ago - 5 comments

#5 - Linking to Rhtslib when system version also installed

Pull Request - State: closed - Opened by grimbough over 5 years ago - 8 comments

#4 - htslib version update?

Issue - State: closed - Opened by knausb almost 6 years ago - 6 comments

#3 - User-specified CPPFLAGS / CFLAGS not respected

Issue - State: closed - Opened by mtmorgan about 6 years ago - 1 comment

#2 - PTHREAD_MUTEX_RECURSIVE undeclared

Issue - State: closed - Opened by dchiu911 over 6 years ago - 5 comments