Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / Bioconductor/AnnotationHub issues and pull requests

#52 - Select() issue

Issue - State: closed - Opened by LucasMcNU 7 months ago - 18 comments

#51 - AnnotationHub and GO Terms

Issue - State: closed - Opened by famfigueiredo 8 months ago - 1 comment

#50 - Error with sesameDataCatche

Issue - State: closed - Opened by AndersJoergensen 9 months ago - 2 comments

#49 - remove defunct display method and doc

Pull Request - State: closed - Opened by LiNk-NY 11 months ago

#48 - Vignette title vs name of Rmd file

Issue - State: closed - Opened by hpages 12 months ago - 2 comments

#46 - dbplyr update is breaking AnnotationHub

Issue - State: closed - Opened by mjsteinbaugh about 1 year ago - 2 comments

#44 - Error: failed to load resource

Issue - State: closed - Opened by ericsan119 about 1 year ago - 3 comments

#43 - R Cannot connect to AnnotationHub server

Issue - State: closed - Opened by gxt13111560461 about 1 year ago - 10 comments

#42 - how to get CpGs for hg38 ?

Issue - State: closed - Opened by sahuno about 1 year ago - 3 comments

#41 - permission denied cannot open compressed file

Issue - State: open - Opened by Dane-Z over 1 year ago - 3 comments

#40 - "R CMD check" failure on Linux ARM64

Issue - State: closed - Opened by martin-g over 1 year ago - 10 comments

#39 - AnnotationHub Update

Issue - State: closed - Opened by gnatowskie over 1 year ago - 2 comments

#37 - Keras model + weights dispatch classes

Pull Request - State: closed - Opened by csoneson almost 2 years ago - 1 comment

#36 - .Defunct display,Hub-method

Pull Request - State: closed - Opened by LiNk-NY almost 2 years ago - 4 comments

#35 - "reason: this db is of type Inparanoid8Db but this is not a defined class"

Issue - State: open - Opened by KMS-Rock about 2 years ago - 12 comments

#34 - Add dcf recipe and to DispatchClassList

Pull Request - State: closed - Opened by LiNk-NY about 2 years ago - 1 comment

#33 - Issue with executing AnnotationHub()

Issue - State: closed - Opened by jo-ong over 2 years ago - 2 comments

#32 - Update AnnotationHub.Rmd

Pull Request - State: closed - Opened by mikelove over 2 years ago

#31 - permission denied on lock file when using AnnotationHub cache

Issue - State: closed - Opened by daler almost 3 years ago - 9 comments

#30 - Adding/updating additional annotation data

Issue - State: closed - Opened by svenbioinf almost 3 years ago - 1 comment

#29 - QFeatures has been fixed

Issue - State: closed - Opened by cvanderaa almost 3 years ago - 1 comment

#28 - vignette inaccuracy

Issue - State: closed - Opened by vjcitn about 3 years ago - 1 comment

#27 - Non-descriptive error

Issue - State: closed - Opened by BaylieRW about 3 years ago - 4 comments

#26 - Fetching RepeatMasker Files with AnnotationHub

Issue - State: closed - Opened by mikecuoco over 3 years ago - 1 comment

#25 - Clarify where the AWS CLI access key and secret should be stored

Pull Request - State: closed - Opened by csoneson over 3 years ago - 1 comment

#24 - fix indentation and clarify on title

Pull Request - State: closed - Opened by mikelove over 3 years ago - 1 comment

#23 - Poorly annotated plants

Issue - State: closed - Opened by Fred-White94 over 3 years ago - 2 comments

#22 - ah <- AnnotationHub() ---error--- filter_() is deprecated as of dplyr 0.7.0

Issue - State: closed - Opened by CQgit almost 4 years ago - 6 comments

#21 - AnnotationHub() Error

Issue - State: closed - Opened by JojoZhangxinye almost 4 years ago - 3 comments

#20 - AnnotationHub(): Server access test is too conservative (with suggestions)

Issue - State: closed - Opened by HenrikBengtsson about 4 years ago - 1 comment

#19 - HELP: setHubOption() -> setAnnotationHubOption()

Issue - State: closed - Opened by HenrikBengtsson about 4 years ago

#18 - Add BugReport: https://github.com/Bioconductor/AnnotationHub/issues (?)

Issue - State: closed - Opened by HenrikBengtsson about 4 years ago - 1 comment

#17 - Cannot connect to AnnotationHub server

Issue - State: closed - Opened by reliscu about 4 years ago - 3 comments

#16 - Using AnnotationHub with job schedular causes an error

Issue - State: open - Opened by kokitsuyuzaki about 4 years ago - 1 comment

#15 - Issue converting Ensembl GTFs

Issue - State: closed - Opened by jmacdon over 4 years ago - 25 comments

#14 - Failed compilation with R-3.5.1

Issue - State: closed - Opened by sk-sahu over 4 years ago - 3 comments

#13 - EnsDb.Hsapiens.v99

Issue - State: closed - Opened by Ci-TJ over 4 years ago - 9 comments

#12 - Hard time troubleshooting a "Corrupt Cache" issue

Issue - State: closed - Opened by hpages over 4 years ago - 4 comments

#10 - AnnotationHub::display() giving incorrect output

Issue - State: closed - Opened by MattBrauer about 5 years ago - 14 comments

#9 - Invertebrate Ensembl ID

Issue - State: closed - Opened by kokitsuyuzaki over 5 years ago - 11 comments

#8 - Fix typo in documentation related to CACHE

Pull Request - State: closed - Opened by mjsteinbaugh over 5 years ago - 1 comment

#7 - fixed windows specific BamFile loading error

Pull Request - State: closed - Opened by FelixErnst over 5 years ago - 6 comments

#6 - added BamFileResource class

Pull Request - State: closed - Opened by FelixErnst over 5 years ago - 24 comments

#5 - AnnotationHub()

Issue - State: closed - Opened by Indigofera over 5 years ago - 14 comments

#4 - curl::has_internet and proxies

Issue - State: closed - Opened by wresch over 6 years ago - 5 comments

#3 - remove extra forward slash unix

Pull Request - State: closed - Opened by LiNk-NY over 6 years ago - 3 comments

#2 - Shiny dependency

Issue - State: closed - Opened by lawremi almost 7 years ago - 9 comments

#1 - call `dbDisconnect()` warning

Issue - State: closed - Opened by mjsteinbaugh almost 7 years ago - 13 comments