BioKIC/NEON-Biorepository-Data-Docs issues and pull requests

#166 - Shipment Check-in field is no longer capturing the date from the comments field

Issue - State: closed - Opened by lsteger about 1 year ago - 1 comment
Labels: bug

#162 - Samples that previously harvested and are available in NEON API now failing

Issue - State: closed - Opened by kyule over 1 year ago - 1 comment
Labels: bug

#160 - Label printing tool modification - restrict label width when a single or odd number of labels is printed

Issue - State: closed - Opened by lsteger over 1 year ago - 1 comment

#158 - Fish label modification request - allow pooling to occur regardless of Fish Point

Issue - State: closed - Opened by lsteger over 1 year ago - 1 comment
Labels: priority

#157 - Plant genetic archive samples receiving incorrect collection dates during reharvesting

Issue - State: closed - Opened by kyule over 1 year ago - 2 comments
Labels: bug, investigate, code

#156 - Systematic harvesting issues giving incorrect identifications to all tick samples

Issue - State: closed - Opened by kyule over 1 year ago - 2 comments
Labels: bug, priority, investigate

#155 - Reharvest fails after data edit to sampleID+sampleClass due to uuid and IGSN still being associated with sample that no longer exists

Issue - State: closed - Opened by mandrewj over 1 year ago - 5 comments
Labels: investigate, code

#154 - Process soft algae "MHurley" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#153 - Process soft algae "LAycock" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#152 - Process soft algae "FAcker" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#151 - Parent sample uuid pulled in during initial harvesting, unable to reharvest due to sampleClass mismatch

Issue - State: closed - Opened by kyule over 1 year ago - 1 comment
Labels: bug, investigate

#149 - tidinterpreted not being updated in omoccurrences table after new determination

Issue - State: closed - Opened by lsteger over 1 year ago - 4 comments
Labels: bug, taxonomy, investigate

#148 - Label printing tool pulls in old determination instead of current determination for species name

Issue - State: closed - Opened by lsteger over 1 year ago - 3 comments
Labels: bug, investigate

#147 - Process diatom "NDesianti" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#146 - Process diatom "MHurley" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#145 - Process diatom "MCantonati" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#144 - Process diatom "LRen" images in server

Issue - State: closed - Opened by arbolitoloco over 1 year ago - 1 comment
Labels: images

#143 - Unable to add Rosie's ORCID to collection contact pages

Issue - State: closed - Opened by lsteger over 1 year ago - 1 comment

#141 - Original Carabid Taxonomy imported incorrectly - hundreds of nomenclatural errors need fixing

Issue - State: closed - Opened by mandrewj almost 2 years ago - 13 comments
Labels: taxonomy, database

#140 - New Label Request - Jar Label for NEON Herptile Collection

Issue - State: closed - Opened by lsteger almost 2 years ago - 1 comment
Labels: enhancement, priority

#139 - Ingest and harvest additional Essig specimens

Issue - State: closed - Opened by arbolitoloco almost 2 years ago - 2 comments

#137 - Request for new specimen label type for herptile collection

Issue - State: closed - Opened by lsteger about 2 years ago - 2 comments
Labels: priority

#136 - Request to update dropdown list in Material Sample Module for Sample Type

Issue - State: closed - Opened by lsteger about 2 years ago - 2 comments
Labels: priority, database

#135 - Harvesting samples does not flag sampleID mis-matches when barcode is present

Issue - State: closed - Opened by mandrewj about 2 years ago - 2 comments

#133 - Request upload/import of carabidae higher taxa (files attached)

Issue - State: closed - Opened by mandrewj about 2 years ago - 6 comments

#132 - Coordinates populated incorrectly during harvesting

Issue - State: closed - Opened by mandrewj about 2 years ago - 1 comment

#131 - Locality searches using NEON site codes does not always return all vouchers/samples

Issue - State: closed - Opened by lsteger about 2 years ago - 3 comments
Labels: investigate

#130 - Request to batch upload herptile images to portal

Issue - State: closed - Opened by lsteger about 2 years ago - 2 comments

#129 - Request to delete (from occurrence records and server) all herptile images in portal

Issue - State: closed - Opened by lsteger over 2 years ago - 1 comment
Labels: help wanted, database, images

#128 - Re-harvesting erases barcode identifiers added through the front end

Issue - State: closed - Opened by lsteger over 2 years ago - 1 comment
Labels: priority, investigate

#127 - Harvesting error: ERROR adding identification to omoccurdetermination table: 1364

Issue - State: closed - Opened by lsteger over 2 years ago - 4 comments
Labels: NEON API, NEON data update, re-harvest needed

#125 - Requesting a snapshot of the NEON plant collections in SEINet

Issue - State: closed - Opened by lsteger over 2 years ago - 1 comment

#124 - Request for a Staff Profile Page on the NEON Biorepository Data Portal

Issue - State: closed - Opened by lsteger over 2 years ago - 4 comments

#123 - Taxon codes left in occurrences place beetles in true bug family

Issue - State: closed - Opened by mandrewj over 2 years ago - 2 comments
Labels: duplicate, code

#122 - Occurrence harvester errors reports page should not include OPAL or discarded samples

Issue - State: closed - Opened by lsteger over 2 years ago - 1 comment

#121 - Request for updated list of collector emails and names from Battelle

Issue - State: closed - Opened by lsteger over 2 years ago - 4 comments
Labels: NEON API, NEON data update

#120 - Taxon Code replacing scientific name during reharvesting

Issue - State: closed - Opened by kyule over 2 years ago - 1 comment
Labels: bug, taxonomy

#119 - Many organismal taxa given "soilSuborder" as their taxonomic rank

Issue - State: closed - Opened by kyule over 2 years ago - 2 comments
Labels: taxonomy

#118 - Identifications incorrectly inferred from sampleID in Aquatic Macroinvert OPAL collection

Issue - State: closed - Opened by kyule over 2 years ago - 4 comments
Labels: bug, identifiers

#116 - Manifests need to be loaded/harvested for OPAL collection

Issue - State: closed - Opened by mandrewj over 2 years ago - 10 comments
Labels: NEON API, database

#115 - "re - Reach" in aquatic site localities should be harvested as "Reach"

Issue - State: closed - Opened by mandrewj almost 3 years ago - 2 comments
Labels: re-harvest needed

#114 - Determination history available via API and not shown in Pinned Carabid records

Issue - State: closed - Opened by mandrewj almost 3 years ago - 1 comment
Labels: question

#113 - Harvesting errors D0620210804133251416

Issue - State: closed - Opened by azhar-h about 3 years ago - 1 comment

#112 - Harvesting issues D1220210824124927605

Issue - State: closed - Opened by azhar-h about 3 years ago - 2 comments

#111 - Harvesting error D0920210517112705501

Issue - State: closed - Opened by azhar-h about 3 years ago - 1 comment

#110 - Harvesting issues D052021051193013759

Issue - State: closed - Opened by azhar-h about 3 years ago - 1 comment

#109 - mpr_002 harvesting issues

Issue - State: closed - Opened by lsteger almost 4 years ago - 3 comments

#108 - D1120200928131500648 harvesting issues

Issue - State: closed - Opened by lsteger almost 4 years ago - 3 comments

#107 - Harvesting issues shipment D0120210804124658927

Issue - State: closed - Opened by azhar-h about 3 years ago - 5 comments
Labels: NEON API

#106 - Records in Aquatic Macroalgae Collection (Chemical Preservation [Clip Harvests])(NEON:AMAC-CPCH) lack determinations

Issue - State: closed - Opened by lsteger almost 4 years ago - 1 comment

#105 - Records in Aquatic Macroalgae Collection (Chemical Preservation [Point Counts]) (NEON-AMAC-CPPC) lack determinations

Issue - State: closed - Opened by lsteger almost 4 years ago - 1 comment

#104 - Collector information not displaying in occurrence records for fish vouchers

Issue - State: closed - Opened by lsteger about 4 years ago - 5 comments
Labels: NEON API

#103 - Half of aquatic plant records lack determination metadata

Issue - State: closed - Opened by lsteger almost 4 years ago - 2 comments
Labels: re-harvest needed

#102 - Seemingly random TaxonCode left in scientificName field in Carabid Collections

Issue - State: closed - Opened by mandrewj almost 4 years ago - 6 comments
Labels: NEON API

#101 - Multiple plant records have CAOV2 and PRVI (Taxon ID) listed under Scientific Name (update Plant Taxonomic List?)

Issue - State: closed - Opened by lsteger almost 4 years ago - 3 comments

#100 - Data Issues for samples in Aquatic Microalgae Collection (Chemical Preservation)(NEON-AMIC-CP)

Issue - State: closed - Opened by lsteger almost 4 years ago - 3 comments
Labels: re-harvest needed

#99 - Manifest issues for VDIC 2018 pooled mosquitos

Issue - State: closed - Opened by azhar-h about 4 years ago - 6 comments
Labels: physical samples

#98 - Harvesting issues for CCDB DNA samples

Issue - State: closed - Opened by azhar-h about 4 years ago - 5 comments

#97 - Bulk mosquitos with | in sampleID

Issue - State: closed - Opened by kyule over 3 years ago - 1 comment

#96 - CCDB samples now have namedLocation - need harvester code update

Issue - State: closed - Opened by mandrewj over 3 years ago - 2 comments

#95 - Occurrence harvests not pulling correct IDs for bulk samples

Issue - State: closed - Opened by mandrewj over 3 years ago - 1 comment

#94 - Cannot add specimens to loan using otherCatalogNumber

Issue - State: closed - Opened by azhar-h over 3 years ago - 3 comments

#92 - Update verbatimAttributes for all samples to match omcollections datasetNames

Issue - State: closed - Opened by kyule almost 4 years ago - 9 comments
Labels: investigate, database, code

#91 - Unable to link Mosquito Vouchers to loan

Issue - State: closed - Opened by mandrewj almost 4 years ago - 1 comment

#90 - Shipment CMNH810652151240 unable to load due to duplicate samples

Issue - State: closed - Opened by mandrewj almost 4 years ago - 1 comment

#89 - Shipment CMNH810652151250 missing samples due to duplicates on manifests

Issue - State: closed - Opened by mandrewj almost 4 years ago - 1 comment

#88 - Mammal and Fish DNA sample class updates, manifest and sampleClass mapping

Issue - State: closed - Opened by kyule almost 4 years ago - 1 comment
Labels: priority, database

#87 - D0620201012122631018 harvesting issues

Issue - State: closed - Opened by mandrewj almost 4 years ago - 1 comment

#86 - Cannot create loan across collections - need additional samlpes loaded

Issue - State: closed - Opened by mandrewj almost 4 years ago - 2 comments

#85 - Need to move all samples of class mam_pertrapnight_in.earSampleID in shipment CCDB-2019-048 from collection NEON-MAMC-EA

Issue - State: closed - Opened by kyule almost 4 years ago - 2 comments
Labels: priority, database

GitHub / BioKIC/NEON-Biorepository-Data-Docs issues and pull requests