BioContainers/containers issues and pull requests

#584 - updated i2nca from v0.3.0 to v0.3.12

Pull Request - State: closed - Opened by cKNUSPeR 9 days ago - 3 comments

#583 - Add DIA-NN 1.9.1

Pull Request - State: closed - Opened by npinter 12 days ago - 4 comments

#582 - 0.7.18 1 deb bwa

Pull Request - State: closed - Opened by gyagu98 18 days ago - 1 comment

#581 - Added PaddleHelix 1.0.1 Dockerfile

Pull Request - State: closed - Opened by Errornautical 18 days ago - 4 comments

#580 - Hmmer

Pull Request - State: closed - Opened by sbassi 23 days ago

#579 - Added PaddleHelix 1.0.1 Dockerfile

Pull Request - State: closed - Opened by Errornautical 24 days ago - 1 comment

#578 - Add PaddleHelixgpu Dockerfile

Pull Request - State: closed - Opened by Errornautical 26 days ago - 3 comments

#577 - Add PaddleHelix CPU and GPU metadata YAML files

Pull Request - State: closed - Opened by Errornautical 26 days ago - 8 comments

#576 - version 20240828 resulting from development over IBIS2024

Pull Request - State: closed - Opened by eead-csic-compbio 27 days ago - 5 comments

#575 - Fix ncbi-cli version

Pull Request - State: closed - Opened by mboudet 3 months ago - 1 comment

#574 - Update ncbi-dataset-cli and add zip/unzip

Pull Request - State: closed - Opened by mboudet 3 months ago - 5 comments

#573 - Added container for i2nca v 0.3.0

Pull Request - State: closed - Opened by cKNUSPeR 3 months ago - 3 comments

#572 - Create Dockerfile for samtools 1.20

Pull Request - State: closed - Opened by sbassi 4 months ago - 1 comment

#571 - Add unzip to ncbi-datasets-cli

Issue - State: closed - Opened by marchoeppner 4 months ago - 2 comments

#570 - new rsat version 20240507, tested in local Docker

Pull Request - State: closed - Opened by eead-csic-compbio 5 months ago - 8 comments

#569 - Adding Dockerfile for BLAZE

Pull Request - State: closed - Opened by atrull314 6 months ago - 2 comments

#568 - Split backup into two jobs to avoid timeouts

Issue - State: open - Opened by mboudet 6 months ago

#567 - pairix container missing Perl dependency

Issue - State: closed - Opened by adthrasher 6 months ago - 1 comment

#566 - cnv_facets is missing fonts

Issue - State: closed - Opened by stianlagstad 6 months ago - 4 comments

#565 - Container for scsplit

Issue - State: closed - Opened by IreneRobles 6 months ago - 4 comments

#564 - feat: dockerfile for scsplit

Pull Request - State: closed - Opened by IreneRobles 6 months ago - 3 comments

#563 - Added container for seeksoultools v 1.2.0

Pull Request - State: open - Opened by EKarpulevich 6 months ago - 6 comments

#562 - Questions: container registries

Issue - State: closed - Opened by sunyi000 7 months ago - 2 comments

#561 - Not sure if this is the place, but https://biocontainers.pro/ shows facet error again for the last couple of days

Issue - State: open - Opened by thondeboer 7 months ago - 2 comments

#560 - Update Dockerfile [FileConverterCommand: Access to nonroot user witho…

Pull Request - State: closed - Opened by linsherpa 7 months ago - 2 comments

#559 - Update Cellpose from 2.2.2 to 3.0.1

Pull Request - State: closed - Opened by FloWuenne 8 months ago - 13 comments

#558 - Contributing lighter images ?

Issue - State: closed - Opened by jfouret 8 months ago - 5 comments

#557 - Old AnnData container causing downstream version incompatabilities

Issue - State: closed - Opened by swbioinf 8 months ago - 2 comments

#556 - Update the meme biocontainer to version 5.5.5 and include graphicsmagick

Issue - State: closed - Opened by thondeboer 8 months ago - 5 comments

#555 - Fix locale issue for diann 1.8.1

Pull Request - State: closed - Opened by mboudet 9 months ago - 2 comments

#555 - Fix locale issue for diann 1.8.1

Pull Request - State: closed - Opened by mboudet 9 months ago - 2 comments

#554 - diann:v1.8.1_cv1 - std::runtime_error

Issue - State: closed - Opened by maff1 9 months ago - 4 comments

#553 - Request a container with capabilities for running plot-bamstats (a tool included in samtools)

Issue - State: open - Opened by gitanoqevaporelmundoentero 9 months ago - 2 comments

#552 - Add Dockerfile for TCRdock v1.0.0

Pull Request - State: closed - Opened by eliasball 9 months ago - 9 comments

#551 - Add stardist 0.8.5 recipe to containers

Pull Request - State: open - Opened by FloWuenne 10 months ago - 11 comments

#550 - update version of EvidentialGene

Pull Request - State: closed - Opened by avani-bhojwani 10 months ago - 2 comments

#548 - Update version for Evidential Gene

Pull Request - State: closed - Opened by avani-bhojwani 10 months ago - 1 comment

#547 - CADD 1.6.post1 container

Pull Request - State: closed - Opened by fa2k 10 months ago - 10 comments

#546 - CADD scripts with bundled required environments

Pull Request - State: closed - Opened by fa2k 11 months ago - 13 comments

#545 - Dask container recipe

Pull Request - State: closed - Opened by cgoina 11 months ago - 12 comments

#544 - Actually rebuild debian-buster-backports to fix GPG issues

Pull Request - State: closed - Opened by mboudet 11 months ago - 2 comments

#543 - Rebuild debian-buster-backports to fix GPG issues

Pull Request - State: closed - Opened by mboudet 11 months ago - 1 comment

#542 - Added procps to ncbi-tools-bin Dockerfile

Pull Request - State: closed - Opened by eeaunin 11 months ago - 20 comments

#541 - Publish vamb v4.1.3

Issue - State: open - Opened by gariem 11 months ago - 4 comments

#540 - Vamb

Pull Request - State: closed - Opened by gariem 11 months ago - 5 comments

#539 - Dask container to be used for an nf-core subworkflow

Pull Request - State: closed - Opened by cgoina 11 months ago - 1 comment

#538 - update Patchwork from v0.5.2 to v0.5.5

Pull Request - State: open - Opened by fethalen 11 months ago - 4 comments

#537 - Web not properly working

Issue - State: closed - Opened by karel-brinda 12 months ago - 3 comments

#536 - Created recipe for cellpose version 2.2.2.

Pull Request - State: closed - Opened by FloWuenne 12 months ago - 1 comment

#535 - New container for Spark

Pull Request - State: closed - Opened by krokicki 12 months ago - 3 comments

#535 - New container for Spark

Pull Request - State: closed - Opened by krokicki 12 months ago - 3 comments

#535 - New container for Spark

Pull Request - State: closed - Opened by krokicki 12 months ago - 3 comments

#534 - Add Hifiadapterfilt 2.0.0

Pull Request - State: closed - Opened by lebarsarthur 12 months ago - 3 comments

#533 - Fixed path for EvidentialGene container

Pull Request - State: closed - Opened by avani-bhojwani 12 months ago - 3 comments

#532 - New container for stitching-spark

Pull Request - State: closed - Opened by krokicki 12 months ago - 5 comments

#531 - Container request for kinship-read

Issue - State: closed - Opened by TCLamnidis about 1 year ago - 2 comments