Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / BV-BRC/BV-BRC-Web issues and pull requests

#823 - Hotfix/2024 0522

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#822 - update phylogenetics api paths

Pull Request - State: closed - Opened by kscgl about 2 months ago

#821 - Bump hotfix rev.

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#820 - Hotfix/2024 0520

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#819 - remove SFVT link from tools&services

Pull Request - State: closed - Opened by kscgl about 2 months ago

#818 - update on h5n1 content

Pull Request - State: closed - Opened by kscgl about 2 months ago

#817 - Fix parse bug.

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#816 - Update for outbreak info

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#815 - Update for outbreak info

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#814 - update on H5N1 outbreak content

Pull Request - State: closed - Opened by kscgl about 2 months ago

#813 - Update on H5N1 outbreak content

Pull Request - State: closed - Opened by kscgl about 2 months ago

#812 - Outbreaks h5

Pull Request - State: closed - Opened by kscgl about 2 months ago

#811 - EJS bugfix

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#810 - EJS bugfix

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#809 - Fix include syntax.

Pull Request - State: closed - Opened by olsonanl about 2 months ago

#808 - Sync merge history

Pull Request - State: closed - Opened by olsonanl 2 months ago

#807 - Sync merge history with master

Pull Request - State: closed - Opened by olsonanl 2 months ago

#806 - Add scrub human to pipeline selection.

Pull Request - State: closed - Opened by olsonanl 2 months ago

#805 - May 2024 update

Pull Request - State: closed - Opened by olsonanl 2 months ago

#804 - Last updates for May release.

Pull Request - State: closed - Opened by olsonanl 2 months ago

#803 - Fix SARS CGA and CARS WW page sticking issue

Pull Request - State: closed - Opened by nicolegobo 2 months ago

#802 - Alpha->Beta, corrected update for JS deps

Pull Request - State: closed - Opened by olsonanl 2 months ago

#801 - Second run at updating JS dependencies.

Pull Request - State: closed - Opened by olsonanl 2 months ago

#800 - Alpha => Beta May release

Pull Request - State: closed - Opened by olsonanl 2 months ago

#799 - disable createTransport from notifySubmitSequence.js

Pull Request - State: closed - Opened by kscgl 2 months ago

#798 - Updated Tools and Services Menu

Pull Request - State: closed - Opened by mshukla1 2 months ago

#797 - Update for new nodemailer and axios.

Pull Request - State: closed - Opened by olsonanl 2 months ago

#796 - Update for JS dependency cleanup

Pull Request - State: closed - Opened by olsonanl 2 months ago

#795 - Revert "Bump ejs from 2.7.4 to 3.1.10"

Pull Request - State: closed - Opened by olsonanl 2 months ago

#794 - Bump postcss from 8.4.17 to 8.4.38 in /public/js/msa

Pull Request - State: open - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#793 - Bump follow-redirects from 1.14.7 to 1.15.6

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#792 - Bump @babel/traverse from 7.14.8 to 7.24.5

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#791 - Bump express from 4.17.1 to 4.19.2

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#790 - Bump nodemailer from 1.11.0 to 6.9.9

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago - 1 comment
Labels: dependencies

#789 - Bump ejs from 2.7.4 to 3.1.10

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#787 - Update to tutorial path in SARS2Wastewater.js

Pull Request - State: closed - Opened by nicolegobo 2 months ago

#786 - Cleanup of docking submission page.

Pull Request - State: closed - Opened by olsonanl 2 months ago

#785 - Add SARS-CoV-2 wasterwater service to genome browser

Pull Request - State: open - Opened by nicolegobo 2 months ago

#784 - Features docking submit

Pull Request - State: closed - Opened by olsonanl 2 months ago

#783 - Features docking submit

Pull Request - State: closed - Opened by olsonanl 2 months ago

#782 - Add scrub human to pipline selection.

Pull Request - State: closed - Opened by bdklahn 3 months ago

#781 - Revert "Add scrub human to pipeline selection."

Pull Request - State: closed - Opened by olsonanl 3 months ago

#780 - Add scrub human to pipeline selection.

Pull Request - State: closed - Opened by bdklahn 3 months ago

#779 - Changes to the SARS-Cov-2 Wastewater front end

Pull Request - State: closed - Opened by nicolegobo 3 months ago

#778 - SARS-CoV-2 reference tree for March 2024

Pull Request - State: closed - Opened by cmzmasek 3 months ago

#777 - advanced search & field update for surveillance

Pull Request - State: closed - Opened by kscgl 3 months ago

#776 - Update and rename SARS2WasteWater.js to SARS2Wastewater.js

Pull Request - State: closed - Opened by nicolegobo 4 months ago

#775 - Addition of SARS2Wastewater

Pull Request - State: closed - Opened by nicolegobo 4 months ago

#774 - add new options to subspecies classification

Pull Request - State: closed - Opened by kscgl 4 months ago

#773 - February 2024 release to production

Pull Request - State: closed - Opened by olsonanl 4 months ago

#772 - enhancenment & bug fix for surveillance

Pull Request - State: closed - Opened by kscgl 4 months ago

#771 - Final changes for February, 2024 release

Pull Request - State: closed - Opened by olsonanl 4 months ago

#770 - add TextInputEncoder to queries in sero&surv advanced search

Pull Request - State: closed - Opened by kscgl 4 months ago

#769 - Alpha => beta update for February, 2024 release

Pull Request - State: closed - Opened by olsonanl 4 months ago

#768 - Merge merges from master.

Pull Request - State: closed - Opened by olsonanl 4 months ago

#767 - validate collection year against strain name

Pull Request - State: closed - Opened by kscgl 4 months ago

#766 - Add additional info buttons for several service submission forms

Pull Request - State: closed - Opened by chmao1 5 months ago

#765 - SARS-CoV-2 reference tree for February 2024

Pull Request - State: closed - Opened by cmzmasek 5 months ago

#764 - remove "(beta)" from the Genome Alignment Viewer page

Pull Request - State: closed - Opened by chmao1 5 months ago

#763 - Add i and ? buttons in the ComparativeSystems submission form

Pull Request - State: closed - Opened by chmao1 5 months ago - 4 comments

#762 - Update virus labels and links

Pull Request - State: closed - Opened by kscgl 5 months ago

#761 - January 2024 update to production

Pull Request - State: closed - Opened by olsonanl 5 months ago

#760 - Update beta with GenomeAlignment change

Pull Request - State: closed - Opened by olsonanl 5 months ago

#759 - GenomeAlignment: remove some advanced parameters

Pull Request - State: closed - Opened by chmao1 5 months ago

#758 - Update beta with CEIRR submission change from alpha

Pull Request - State: closed - Opened by olsonanl 5 months ago

#757 - bug fix rerun CEIRRDataSubmission

Pull Request - State: closed - Opened by kscgl 5 months ago

#756 - Bring beta in line with master commits.

Pull Request - State: closed - Opened by olsonanl 5 months ago

#755 - Revert "archaeopteryx.js version 2.0.3a2"

Pull Request - State: closed - Opened by olsonanl 5 months ago

#754 - Alpha => Beta update for January, 2024 release

Pull Request - State: closed - Opened by olsonanl 5 months ago

#753 - increase MSA max limit to 5k for grid container

Pull Request - State: closed - Opened by kscgl 5 months ago

#752 - Ceirr data submission

Pull Request - State: closed - Opened by kscgl 5 months ago

#750 - Fix bugs in the GenomeAlignment submission form

Pull Request - State: closed - Opened by chmao1 5 months ago

#749 - adding intermediate changes to subsystems keyword filter

Pull Request - State: closed - Opened by cucinellclark 5 months ago

#748 - add lineages and sort by date in descending order

Pull Request - State: closed - Opened by kscgl 5 months ago

#747 - update phyloview submodule

Pull Request - State: closed - Opened by kscgl 5 months ago

#746 - Alpha clark rerunfixes

Pull Request - State: closed - Opened by cucinellclark 6 months ago

#745 - updating taxon trees

Pull Request - State: closed - Opened by cucinellclark 6 months ago

#744 - archaeopteryx version 2.0.3a2

Pull Request - State: closed - Opened by cmzmasek 6 months ago - 5 comments

#742 - archaeopteryx.js version 2.0.3a2

Pull Request - State: closed - Opened by cmzmasek 6 months ago - 2 comments

#741 - fixing NCBI Gene ID and NCBI GI Number dropdown values

Pull Request - State: closed - Opened by cucinellclark 6 months ago

#740 - Fixing homology data issue

Pull Request - State: closed - Opened by cucinellclark 6 months ago - 1 comment

#738 - Font size changes for the taxon trees on Phylogeny tab

Pull Request - State: closed - Opened by chmao1 6 months ago - 2 comments

#737 - add species to metadata in GeneTree BV-BRC/issues#1144

Pull Request - State: closed - Opened by kscgl 6 months ago

#736 - update surveillance map selection to display up to 750 locations

Pull Request - State: closed - Opened by kscgl 6 months ago

#733 - workspace object selector

Pull Request - State: closed - Opened by aswarren 6 months ago - 3 comments

#732 - Addressing git issues

Pull Request - State: closed - Opened by kscgl 6 months ago - 1 comment

#584 - SVG icons for use

Pull Request - State: closed - Opened by chris-c-thomas over 1 year ago

#521 - Bump json5 from 1.0.1 to 1.0.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#517 - Bump json5 and tsconfig-paths

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#507 - Add adv params to rerun for metagenome binning

Pull Request - State: closed - Opened by chris-c-thomas over 1 year ago - 2 comments

#501 - Bump express from 4.17.1 to 4.17.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#500 - Bump qs from 6.5.2 to 6.5.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#492 - Bump decode-uri-component from 0.2.0 to 0.2.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#491 - Bump decode-uri-component from 0.2.0 to 0.2.2 in /public/js/msa

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#479 - Bump loader-utils, babel-loader and webpack in /public/js/msa

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 4 comments
Labels: dependencies