Ecosyste.ms: Issues

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GitHub / BUStools/BUSpaRse issues and pull requests

#16 - memory error while generating bus file with large index

Issue - State: open - Opened by tangybat over 2 years ago - 7 comments

#15 - fail to get the tr2g file from Gencode fasta

Issue - State: closed - Opened by Ci-TJ about 3 years ago - 2 comments

#14 - Error in fill_cell_gene

Issue - State: closed - Opened by jmzvillarreal over 4 years ago - 1 comment

#13 - Errors in extracted intron sequences

Issue - State: closed - Opened by csoneson over 4 years ago - 1 comment

#11 - NAs in tr2g.tsv after `get_velocity_files()`

Issue - State: closed - Opened by palfalvi over 4 years ago - 2 comments

#10 - Typo

Pull Request - State: closed - Opened by PeteHaitch almost 5 years ago

#9 - Error when writing files in get_velocity files

Issue - State: closed - Opened by cnk113 almost 5 years ago - 1 comment

#8 - Possible to go from kallisto pseudo output to bus file?

Issue - State: closed - Opened by biobenkj almost 5 years ago - 1 comment

#7 - read_count_output doesn't work.

Issue - State: closed - Opened by methornton about 5 years ago - 2 comments

#6 - spliced assay is not similar to RNA assay in Seurat-velocity obj

Issue - State: closed - Opened by hmassalha about 5 years ago - 2 comments

#5 - package ‘BUSpaRse’ is not available (for R version 3.6.1)

Issue - State: closed - Opened by bsmith030465 over 5 years ago - 1 comment

#4 - get_velocity_files function for multiple species

Issue - State: closed - Opened by rfarouni over 5 years ago - 1 comment

#3 - make_sparse_matrix excludes barcodes even with whitelist=NULL

Issue - State: closed - Opened by willtownes almost 6 years ago - 2 comments

#2 - TCC sparse matrix

Issue - State: closed - Opened by Simon-Coetzee almost 6 years ago - 2 comments

#1 - Reading in bus tools output file in parallel

Issue - State: closed - Opened by lambdamoses about 6 years ago
Labels: enhancement, help wanted