Ecosyste.ms: Issues

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GitHub / AuReMe/esmecata issues and pull requests

#12 - Proteomes optimization

Pull Request - State: closed - Opened by ArnaudBelcour 10 months ago

#11 - Add an option to choose a minimal number proteomes required to be in a taxon.

Issue - State: closed - Opened by ArnaudBelcour over 2 years ago - 1 comment
Labels: enhancement

#10 - SPARQL Query on uniprot to find proteomes does not work

Issue - State: closed - Opened by ArnaudBelcour over 2 years ago - 1 comment
Labels: bug

#9 - Add query to metanetx endpoint?

Issue - State: closed - Opened by ArnaudBelcour almost 3 years ago - 1 comment

#8 - Use new UniProt API.

Issue - State: closed - Opened by ArnaudBelcour almost 3 years ago - 1 comment

#7 - Downloading proteomes/annotation can get stuck

Issue - State: closed - Opened by ArnaudBelcour almost 3 years ago - 2 comments
Labels: bug

#6 - Issue with SSL.

Issue - State: closed - Opened by ArnaudBelcour almost 3 years ago - 2 comments

#5 - Fix #4 - add threshold for clustering and deal with missing inputs at …

Pull Request - State: closed - Opened by cfrioux about 3 years ago

#4 - Customizing the threshold used to keep a protein in the core proteome

Issue - State: closed - Opened by cfrioux about 3 years ago - 1 comment
Labels: enhancement

#3 - fix #2 fix package name

Pull Request - State: closed - Opened by cfrioux about 3 years ago

#2 - Name of package is erroneous when getting current version

Issue - State: closed - Opened by cfrioux about 3 years ago

#1 - Edit genbank

Pull Request - State: closed - Opened by baptisteruiz over 4 years ago - 1 comment