Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / AthenaEPI/dmipy issues and pull requests

#129 - Fix installation issues with Python >= 3.8

Pull Request - State: closed - Opened by RamiBouk about 2 months ago

#128 - How to build a SANDI like model by DMIPY

Issue - State: open - Opened by chenshuomr 2 months ago

#127 - Create python-package.yml

Pull Request - State: open - Opened by rutgerfick 4 months ago

#126 - How to generate fiber bundles

Issue - State: open - Opened by cxmDREAM 6 months ago - 3 comments

#125 - Installation problem

Issue - State: open - Opened by engineeringmath 11 months ago - 6 comments

#124 - M2 Mac distribtuion

Issue - State: open - Opened by mrgrist over 1 year ago - 5 comments

#123 - FODs estimation issue with NODDI

Issue - State: open - Opened by irenepersoglia about 2 years ago

#122 - Fitting a signal

Issue - State: open - Opened by StefaniaOliviero over 2 years ago

#120 - fix a bracket error

Pull Request - State: closed - Opened by dannis999 over 2 years ago

#119 - DBSI Model

Issue - State: open - Opened by willi3by over 2 years ago

#117 - Could the software calculate the DKI model

Issue - State: open - Opened by 406354348 almost 3 years ago - 1 comment

#116 - Add csd plus

Pull Request - State: closed - Opened by tomdelahaije almost 3 years ago

#115 - Two compartment Multi-tissue MCMDI model

Issue - State: open - Opened by villalonreina almost 4 years ago - 1 comment

#114 - force scipy version 1.4.1

Pull Request - State: closed - Opened by matteofrigo about 4 years ago

#113 - open readme only once in setup.py

Pull Request - State: closed - Opened by matteofrigo about 4 years ago

#112 - fix readme for pypi

Pull Request - State: closed - Opened by matteofrigo about 4 years ago

#111 - update version and add long description for PyPi

Pull Request - State: closed - Opened by matteofrigo about 4 years ago

#110 - Multi tissue tortuosity

Pull Request - State: closed - Opened by matteofrigo about 4 years ago - 2 comments

#109 - Calculating a Multi-Tissue ICVF from NODDI

Issue - State: open - Opened by TMNir about 4 years ago - 9 comments

#108 - bugfix: fixes potential nonmatching b0mask with bvalues above 0.

Pull Request - State: closed - Opened by rutgerfick about 4 years ago - 1 comment

#106 - MCMDI issues when b0s are not zeros (b=0)

Issue - State: open - Opened by villalonreina about 4 years ago - 5 comments

#105 - Cascading multi-tissue volume fraction maps issues

Issue - State: open - Opened by villalonreina about 4 years ago - 5 comments

#104 - Add dmipy to Open Neuroscience

Issue - State: open - Opened by amchagas over 4 years ago

#103 - dti fit

Issue - State: open - Opened by fayemckenna over 4 years ago - 8 comments

#102 - divide by zero in volume fraction normalization of tortuosity

Issue - State: open - Opened by matteofrigo over 4 years ago - 3 comments

#101 - fix syntax error

Pull Request - State: closed - Opened by matteofrigo over 4 years ago - 4 comments

#100 - syntax bug in exception

Issue - State: open - Opened by matteofrigo over 4 years ago - 1 comment

#99 - List dmipy in the learn-neuroimaging platform

Issue - State: open - Opened by matteofrigo over 4 years ago - 2 comments

#98 - add multi tissue correction to tortuosity constraint

Pull Request - State: closed - Opened by matteofrigo over 4 years ago - 13 comments

#97 - Amico

Pull Request - State: closed - Opened by Sara04 over 4 years ago - 11 comments

#96 - update sphinx

Pull Request - State: open - Opened by rutgerfick over 4 years ago - 2 comments

#95 - Calculating scalars for noddi-bingham distributions

Issue - State: open - Opened by rutgerfick over 4 years ago - 1 comment

#94 - Merge pull request #1 from AthenaEPI/master

Pull Request - State: closed - Opened by Sara04 over 4 years ago - 5 comments

#93 - Bug when running multi-tissue MultiCompartmentSphericalMeanModel

Issue - State: open - Opened by villalonreina over 4 years ago - 9 comments

#92 - BUGFIX: otsu with volume indices.

Pull Request - State: closed - Opened by rutgerfick over 4 years ago - 1 comment

#91 - Adds CSD optimizer based on sum-of-squares.

Pull Request - State: open - Opened by rutgerfick over 4 years ago

#90 - Sum-of-squared constrained CSD

Issue - State: open - Opened by rutgerfick over 4 years ago

#89 - FEAT: add skeleton for amico implementation

Pull Request - State: open - Opened by matteofrigo over 4 years ago - 1 comment

#88 - BUGFIX: median otsu parameters to latest dipy version.

Pull Request - State: closed - Opened by rutgerfick over 4 years ago - 1 comment

#87 - Version update

Pull Request - State: closed - Opened by rutgerfick almost 5 years ago - 1 comment

#86 - Adds spherical harmonics distributed model to MC approach.

Pull Request - State: closed - Opened by rutgerfick almost 5 years ago - 3 comments

#85 - FIX: pass scheme to call of MultiCompartmentSphericalHarmonicsModel

Pull Request - State: closed - Opened by matteofrigo almost 5 years ago - 2 comments

#84 - Gtm tortuosity

Pull Request - State: closed - Opened by matteofrigo about 5 years ago - 1 comment

#83 - Replaces prints with logging module.

Pull Request - State: open - Opened by rutgerfick about 5 years ago - 2 comments

#82 - Pip install prep: prints to logging

Issue - State: open - Opened by rutgerfick over 5 years ago

#81 - fixes gtab dmipy2dipy bug with undefined deltas

Pull Request - State: closed - Opened by rutgerfick over 5 years ago - 2 comments

#80 - Removes spherical mean print and fixes dhollander docstring

Pull Request - State: closed - Opened by rutgerfick over 5 years ago - 2 comments

#79 - probably unwanted print spherical mean

Issue - State: closed - Opened by matteofrigo over 5 years ago - 1 comment

#78 - None delta causes error in gtab_dmipy2dipy

Issue - State: closed - Opened by matteofrigo over 5 years ago - 1 comment

#77 - check dipy compatibility

Issue - State: open - Opened by matteofrigo over 5 years ago - 2 comments

#76 - median_otsu misused in three_tissue_response_dhollander16

Issue - State: closed - Opened by matteofrigo over 5 years ago - 3 comments

#75 - order of output in `three_tissue_response_dhollander16`

Issue - State: closed - Opened by matteofrigo over 5 years ago - 1 comment

#74 - Fixes flake8 errors.

Pull Request - State: closed - Opened by rutgerfick over 5 years ago - 1 comment

#73 - Fix travis builds

Pull Request - State: closed - Opened by demianw over 5 years ago - 3 comments

#72 - SS3T-CSD released

Issue - State: open - Opened by thijsdhollander over 5 years ago - 2 comments

#71 - Clip SDM to avoid instabilities

Pull Request - State: closed - Opened by weningerleon over 5 years ago - 3 comments

#70 - FIX: change use of print for py3 compatibility

Pull Request - State: closed - Opened by matteofrigo over 5 years ago

#69 - print statement not compatible with python 3

Issue - State: closed - Opened by matteofrigo over 5 years ago - 1 comment

#68 - Clipping Signal Decay Metric above 10 to 10

Issue - State: closed - Opened by rutgerfick over 5 years ago - 1 comment

#67 - Small bug fix in signal_decay_metric

Pull Request - State: closed - Opened by weningerleon over 5 years ago - 11 comments

#66 - Adds generalized multi-tissue modeling and updates tissue response models

Pull Request - State: closed - Opened by rutgerfick over 5 years ago - 1 comment

#65 - why not DKI model?

Issue - State: closed - Opened by foxet over 5 years ago - 1 comment

#64 - about parameters for verdict model

Issue - State: closed - Opened by foxet over 5 years ago - 1 comment

#62 - A little confuse about the explaination for noddi parameter's maps

Issue - State: closed - Opened by foxet over 5 years ago - 2 comments

#61 - "Cannot estimate signal grid with voxel-dependent x0_vector."

Issue - State: closed - Opened by foxet over 5 years ago - 1 comment

#59 - does noddi need delta [ms] and |Delta[ms]?

Issue - State: closed - Opened by foxet over 5 years ago - 3 comments

#58 - there is error when loading SD2BinghamDistributed

Issue - State: closed - Opened by foxet over 5 years ago - 4 comments

#56 - Bundle model should remove input model orientientations

Issue - State: open - Opened by rutgerfick over 5 years ago

#55 - Fix sphinx docs

Issue - State: open - Opened by rutgerfick over 5 years ago

#54 - Fix CI Travis

Issue - State: closed - Opened by rutgerfick over 5 years ago - 1 comment

#53 - Update FOD vizualization

Issue - State: open - Opened by rutgerfick over 5 years ago

#52 - Axtiveax example

Issue - State: open - Opened by rutgerfick over 5 years ago

#51 - Adds non-distributed bundle model to distributed models.

Pull Request - State: closed - Opened by rutgerfick over 5 years ago

#50 - Fixes integer rounded printing of tournier13 response convergence

Pull Request - State: closed - Opened by rutgerfick over 5 years ago

#48 - Adds IVIM example.

Pull Request - State: closed - Opened by rutgerfick over 5 years ago

#47 - Adds setting parameter optimization bounds functionality.

Pull Request - State: closed - Opened by rutgerfick over 5 years ago

#46 - Adds catch for fitting data without b0 measurements.

Pull Request - State: closed - Opened by rutgerfick over 5 years ago

#45 - should i ignore these warning ?

Issue - State: closed - Opened by foxet over 5 years ago - 6 comments

#44 - Invariants PR

Pull Request - State: closed - Opened by maurozucchelli almost 6 years ago - 1 comment

#43 - Dmipy 0.2 framework refactor

Pull Request - State: closed - Opened by rutgerfick almost 6 years ago

#42 - BUG: Fix Callaghan sphere model

Pull Request - State: open - Opened by mjallais about 6 years ago

#41 - Refactor model properties

Pull Request - State: closed - Opened by rutgerfick about 6 years ago - 2 comments

#40 - Generalized AMICO

Issue - State: open - Opened by rutgerfick about 6 years ago

#39 - IVIM parameter conversion to blood volume fractions

Issue - State: open - Opened by rutgerfick about 6 years ago

#37 - Ability to easily set parameter optimization ranges

Issue - State: closed - Opened by rutgerfick over 6 years ago

#35 - Fixel Analysis: Apparent Fiber Density

Issue - State: open - Opened by rutgerfick over 6 years ago

#34 - Update acquisition scheme and model handling for clinical data (deltas unknown)

Pull Request - State: closed - Opened by rutgerfick over 6 years ago - 1 comment

#33 - Refactor acquisition scheme to take empty deltas for clinical data

Issue - State: closed - Opened by sitek over 6 years ago - 5 comments

#32 - General catch for error in optimizer

Issue - State: open - Opened by rutgerfick over 6 years ago

#31 - Fall-back for MIX to to deal with tortuosity constraints

Issue - State: closed - Opened by rutgerfick over 6 years ago - 1 comment

#30 - Anisotropic IVIM

Pull Request - State: open - Opened by rutgerfick over 6 years ago - 3 comments