Ecosyste.ms: Issues

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GitHub / ArneBinder/pytorch-ie issues and pull requests

#440 - release 0.31.4

Pull Request - State: closed - Opened by ArneBinder about 2 months ago

#439 - add support to F1 metric values

Pull Request - State: closed - Opened by ArneBinder 2 months ago
Labels: enhancement

#438 - deduplicate annotations in pipeline [WIP]

Pull Request - State: open - Opened by ArneBinder 2 months ago

#436 - implement `Document.deduplicate_annotations()`

Pull Request - State: closed - Opened by ArneBinder 3 months ago
Labels: enhancement

#434 - release 0.31.3

Pull Request - State: closed - Opened by ArneBinder 3 months ago

#433 - outsource `PieModelHFHubMixin.load_model_file`

Pull Request - State: closed - Opened by ArneBinder 3 months ago
Labels: enhancement

#432 - re-add `docformatter` pre-commit hook

Issue - State: open - Opened by ArneBinder 4 months ago

#431 - release 0.31.2

Pull Request - State: closed - Opened by ArneBinder 4 months ago

#430 - fix tests (outdated upload/download-artifact)

Pull Request - State: closed - Opened by ArneBinder 4 months ago
Labels: bug, ci

#429 - fix `Document.add_all_annotations_from_other()`

Pull Request - State: closed - Opened by ArneBinder 4 months ago
Labels: bug

#428 - implement `merge_annotations_from_documents()`

Pull Request - State: closed - Opened by ArneBinder 4 months ago
Labels: enhancement

#427 - release 0.31.1

Pull Request - State: closed - Opened by ArneBinder 8 months ago

#426 - implement `Document.annotation_types()`

Pull Request - State: closed - Opened by ArneBinder 8 months ago
Labels: enhancement

#425 - `F1Metric`: infer labels also from predicted annotations

Pull Request - State: closed - Opened by ArneBinder 8 months ago
Labels: bug

#423 - update paper ref

Pull Request - State: closed - Opened by ArneBinder 8 months ago
Labels: documentation

#422 - update citation

Issue - State: closed - Opened by ArneBinder 8 months ago

#421 - release 0.31.0

Pull Request - State: closed - Opened by ArneBinder 9 months ago

#420 - install `poetry-plugin-export` manually in tests workflow [WIP]

Pull Request - State: open - Opened by ArneBinder 9 months ago
Labels: ci

#419 - update dependencies

Pull Request - State: closed - Opened by ArneBinder 9 months ago
Labels: breaking

#418 - `Document.add_all_annotations_from_other` returns a mapping

Pull Request - State: closed - Opened by ArneBinder 9 months ago
Labels: enhancement, breaking

#100 - test_re_text_classification test fails due to floating point comparison

Issue - State: closed - Opened by ChristophAlt almost 3 years ago - 1 comment

#99 - Add readthedocs configuration

Issue - State: open - Opened by ChristophAlt almost 3 years ago
Labels: documentation

#98 - allow generic annotations

Issue - State: closed - Opened by ArneBinder almost 3 years ago - 2 comments

#97 - Release 0.2.1

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago

#96 - Readme refactoring

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago
Labels: documentation

#95 - Refactor/document typed

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 4 comments
Labels: refactoring

#94 - generalize train example

Issue - State: open - Opened by ArneBinder almost 3 years ago
Labels: documentation

#93 - refactor document

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 6 comments
Labels: refactoring

#92 - Switch to src layout

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago
Labels: build

#91 - simplify / shorten tests in utils and taskmodules

Issue - State: open - Opened by ArneBinder almost 3 years ago
Labels: testing

#90 - Properly configure coverage.py

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago - 1 comment
Labels: ci

#89 - refactor example test documents

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 1 comment
Labels: refactoring

#88 - Add labeler and release-drafter to github workflow

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago
Labels: ci

#87 - Enable flake8 in pre-commit checks

Issue - State: open - Opened by ChristophAlt almost 3 years ago
Labels: testing

#86 - mypy does not check for unreachable code

Issue - State: open - Opened by ArneBinder almost 3 years ago
Labels: testing

#85 - control if statistics are collected and shown

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago

#84 - fix brat equivalence_relations

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago
Labels: bug

#83 - fix BRAT hf_dataset: equivalence relation

Issue - State: closed - Opened by ArneBinder almost 3 years ago
Labels: bug

#82 - fix warnings for unaligened span

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago
Labels: bug

#81 - fix checks for required span annotations

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago
Labels: bug

#80 - move utility functions into own package

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 1 comment
Labels: refactoring

#79 - make it optional to include ill formed spans when predicting

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago

#78 - Initial release

Issue - State: closed - Opened by ChristophAlt almost 3 years ago - 1 comment

#77 - Don't use logging.info calls in iterative contexts.

Issue - State: closed - Opened by ChristophAlt almost 3 years ago - 1 comment

#76 - Prepare CI / CD pipeline for initial release

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago
Labels: ci

#75 - Change project structure to src/ format

Issue - State: closed - Opened by ChristophAlt almost 3 years ago - 1 comment

#74 - Don't compare floating point numbers in unittests

Issue - State: closed - Opened by ChristophAlt almost 3 years ago

#73 - [WIP] Auto Model and TaskModule

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 2 comments

#72 - Windowing for token classification

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 2 comments

#71 - simplify transformer_token_classification_taskmodule

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 1 comment

#70 - annotation getters default to None (#64)

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago

#69 - Windowing for text class rel + annotation getters

Pull Request - State: closed - Opened by ChristophAlt almost 3 years ago

#68 - Use exceptions instead of assertions.

Issue - State: closed - Opened by ChristophAlt almost 3 years ago

#67 - tests for TransformerTokenClassificationTaskModule

Pull Request - State: closed - Opened by ArneBinder almost 3 years ago - 1 comment

#66 - fix decode

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 2 comments
Labels: bug

#65 - implement #63

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 3 comments

#64 - annotation getters default to None

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 1 comment

#62 - decode is broken when an document does not contain any relation

Issue - State: closed - Opened by ArneBinder about 3 years ago
Labels: bug

#61 - Fix brat serialization with newlines

Pull Request - State: closed - Opened by ArneBinder about 3 years ago
Labels: bug

#60 - Evaluate Class Resolver as an alternative to passing objects to model and taskmodule constructors.

Issue - State: open - Opened by ChristophAlt about 3 years ago - 3 comments
Labels: models

#59 - create tests from the examples that check the actual pipeline output

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#58 - add tests for TransformerRETextClassificationTaskModule

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 3 comments

#57 - pipeline: cleanup argument handling

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#56 - Add Partition Filter Network for Joint Entity and Relation Extraction

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: new model

#55 - Fix issue #51

Pull Request - State: closed - Opened by ChristophAlt about 3 years ago

#54 - Add modelcards to our models uploaded to HF model hub

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: enhancement

#53 - Add Bi-affine Span Classifier

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: new model

#52 - Imbalanced learning

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: models

#50 - fix issue #49

Pull Request - State: closed - Opened by ArneBinder about 3 years ago
Labels: bug

#49 - unbatch_output is broken for (RE)TextClassifierTaskModule when batch_size>1

Issue - State: closed - Opened by ArneBinder about 3 years ago - 1 comment
Labels: bug

#48 - show pipeline progress

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#47 - implement windowing for text classification based rel

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 3 comments

#46 - parametrize split names in Datamodule

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 2 comments

#45 - fix label id creation for single_sentence=False in encode_input

Pull Request - State: closed - Opened by ArneBinder about 3 years ago
Labels: bug

#44 - windowing for text classifier based rel model

Issue - State: closed - Opened by ArneBinder about 3 years ago

#43 - partitioning for TransformerRETextClassificationTaskModule

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 2 comments

#42 - improve train val split creation in DataModule

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 3 comments

#41 - Increase required minimum test coverage.

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: testing

#40 - Unpin setuptools once we reach pytorch version 10.2

Issue - State: closed - Opened by ChristophAlt about 3 years ago - 1 comment

#39 - Fix remaining mypy errors

Pull Request - State: closed - Opened by ChristophAlt about 3 years ago - 1 comment

#38 - Unittests for TransformerSpanClassificationModel

Pull Request - State: closed - Opened by ChristophAlt about 3 years ago - 2 comments

#37 - fix stupid bug in TransformerTokenClassificationTaskModule introduced…

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#36 - Structure of models and taskmodules

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: core

#35 - fix TaskEncodingDataset: use correct base type

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#34 - Unittests for Taskmodule

Pull Request - State: closed - Opened by ChristophAlt about 3 years ago

#33 - fix a lot of typing in mdules/ and taskmodules/

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 2 comments

#32 - fix typing for data/ and core/

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 1 comment

#31 - implement serialize_brat() and add test for that and load_brat()

Pull Request - State: closed - Opened by ArneBinder about 3 years ago - 1 comment

#30 - Add TANL

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: new model

#29 - Add (m)GENRE

Issue - State: open - Opened by ChristophAlt about 3 years ago
Labels: new model

#28 - Add transformer seq2seq model and taskmodule

Pull Request - State: closed - Opened by ChristophAlt about 3 years ago

#27 - add and improve type annotations to taskmodules

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#26 - fix encode_target for self.single_sentence=True

Pull Request - State: closed - Opened by ArneBinder about 3 years ago

#25 - single_sentence=True does not work

Issue - State: closed - Opened by ArneBinder about 3 years ago - 2 comments
Labels: bug

#24 - fix signature of TransformerSpanClassificationTaskModule.encode_target

Pull Request - State: closed - Opened by ArneBinder about 3 years ago