AllenCellModeling/datastep issues and pull requests

#61 - unpinning all < specs

Pull Request - State: closed - Opened by donovanr about 4 years ago - 1 comment

#60 - feature/allow-parquet-as-serialization-format

Pull Request - State: closed - Opened by evamaxfield over 4 years ago
Labels: enhancement

#59 - feature/support-absolute-paths

Pull Request - State: closed - Opened by evamaxfield over 4 years ago - 1 comment
Labels: enhancement

#58 - admin/upgrade-from-cookiecutter

Pull Request - State: closed - Opened by evamaxfield over 4 years ago

#57 - Feature: Raise step error on n task error count

Issue - State: open - Opened by evamaxfield over 4 years ago
Labels: enhancement

#56 - Feature: Add step README management

Issue - State: open - Opened by evamaxfield over 4 years ago
Labels: enhancement

#55 - Add errors.json file management

Issue - State: open - Opened by evamaxfield almost 5 years ago
Labels: enhancement

#54 - Create StepFactory class

Issue - State: closed - Opened by evamaxfield almost 5 years ago - 1 comment
Labels: enhancement

#53 - bugfix/make-new-step

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago - 1 comment
Labels: bug

#52 - make_new_step gets trapped in a maze of recursion

Issue - State: closed - Opened by jcass11 almost 5 years ago
Labels: bug

#51 - bugfix/updates-after-testing

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago - 2 comments
Labels: bug, enhancement

#50 - feature/update-documentation

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: documentation, enhancement

#49 - bugfix/git-push-updates

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug, enhancement

#48 - Generate a basic README file during push

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: enhancement

#47 - feature/update-config-logging

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: enhancement

#46 - Fix the manifest rel2abs and manifest abs2rel functions

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug

#45 - Move the `clear_before_run` to only occur during the run's wrapper

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug

#44 - Log which version of datastep is installed in `init_parameters.json`

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: enhancement, high priority

#43 - step inherits from Task rather than ABC

Pull Request - State: closed - Opened by donovanr almost 5 years ago - 4 comments

#42 - add methods for manifest filrepaths abs2rel and rel2abs

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#41 - update make_new_step template to new init

Pull Request - State: closed - Opened by donovanr almost 5 years ago - 1 comment

#40 - lol

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#39 - Feature/init cleanup

Pull Request - State: closed - Opened by donovanr almost 5 years ago - 1 comment

#38 - Feature/colname persistence

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#37 - rename quilt cli class to allow import

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#36 - _upack_config returns config dict, log that

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#35 - Add tests for quilt IO

Issue - State: open - Opened by evamaxfield almost 5 years ago
Labels: enhancement, high priority

#34 - mv cc cmd line quilt init to datastep

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#33 - Make @task decorator work with run

Issue - State: closed - Opened by evamaxfield almost 5 years ago - 5 comments

#32 - Future: Deal with prefect top level map function

Issue - State: open - Opened by evamaxfield almost 5 years ago - 1 comment
Labels: low priority

#31 - Future: Add `check_exists` flag to init of `Step` class

Issue - State: open - Opened by evamaxfield almost 5 years ago - 8 comments

#30 - Feature/clean

Pull Request - State: closed - Opened by donovanr almost 5 years ago

#29 - git branches with "/" in them render as overly nested quilt direcories

Issue - State: closed - Opened by donovanr almost 5 years ago
Labels: low priority

#28 - Fix flake8 error on make_new_step generated file

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug, low priority

#27 - bugfix/fix-tests

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug

#26 - feature/more-robust-make-step

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: enhancement

#25 - fix make_new_step

Issue - State: closed - Opened by donovanr almost 5 years ago

#24 - Rename project to "datastep", primary module still called "Step"

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago
Labels: enhancement

#23 - abs2rel breaks when running on already relative path

Issue - State: closed - Opened by donovanr almost 5 years ago

#22 - Rename repo and project to datastep

Issue - State: closed - Opened by evamaxfield almost 5 years ago
Labels: bug, enhancement

#21 - need function to clean out files not in manifest at any branch

Issue - State: closed - Opened by donovanr almost 5 years ago
Labels: low priority

#20 - param.json files not being uploaded to quilt

Issue - State: closed - Opened by donovanr almost 5 years ago

#19 - add owner to config

Issue - State: closed - Opened by donovanr almost 5 years ago - 1 comment

#18 - bin script to initialize new quilt repo for project

Issue - State: closed - Opened by donovanr almost 5 years ago - 2 comments

#17 - use local_stagin instead of TemporaryDirectory

Issue - State: closed - Opened by donovanr almost 5 years ago

#16 - Add non-validated dataset push

Pull Request - State: closed - Opened by evamaxfield almost 5 years ago

#15 - use same dict for init and run params

Issue - State: closed - Opened by donovanr about 5 years ago

#14 - save init args to params json

Issue - State: closed - Opened by donovanr about 5 years ago

#13 - save step_config.json to quilt staging

Issue - State: closed - Opened by donovanr about 5 years ago
Labels: enhancement

#12 - can't run from anywhere but git repo root

Issue - State: closed - Opened by donovanr about 5 years ago
Labels: bug

#11 - @log_params on init as well as run?

Issue - State: closed - Opened by donovanr about 5 years ago

#10 - feature/quilt-management-pull

Pull Request - State: closed - Opened by donovanr about 5 years ago

#9 - Add kwarg to `run` which is "--check-strict" or "production" or similar

Issue - State: closed - Opened by evamaxfield about 5 years ago - 7 comments
Labels: enhancement

#8 - use list of classes rather than directories for direct_upstream_tasks

Issue - State: closed - Opened by donovanr about 5 years ago

#7 - Configure quilt push, pull, and checkout

Issue - State: closed - Opened by evamaxfield about 5 years ago
Labels: enhancement

#6 - Support step configuration through various methods

Issue - State: closed - Opened by evamaxfield about 5 years ago
Labels: enhancement

#5 - Best Practices Discussion: How to handle rapid experimentation with result saving

Issue - State: closed - Opened by evamaxfield about 5 years ago - 1 comment
Labels: question

#4 - local_staging/all gets created when running mti_mnist all run

Issue - State: closed - Opened by donovanr about 5 years ago - 3 comments

#3 - Store all most recent parameters used on the object prior to push

Issue - State: closed - Opened by evamaxfield about 5 years ago
Labels: enhancement

#2 - Add clean method

Issue - State: closed - Opened by evamaxfield about 5 years ago - 2 comments
Labels: enhancement

#1 - Create example project

Issue - State: closed - Opened by donovanr about 5 years ago - 1 comment
Labels: enhancement

GitHub / AllenCellModeling/datastep issues and pull requests