AdaptiveMotorControlLab/CellSeg3d issues and pull requests

#61 - Segfault when running test on macOS

Issue - State: open - Opened by C-Achard about 1 year ago
Labels: help wanted, fix, pytest

#60 - Add artifact removal

Pull Request - State: closed - Opened by C-Achard about 1 year ago
Labels: enhancement

#59 - macOS Silicon install

Pull Request - State: closed - Opened by C-Achard about 1 year ago - 3 comments
Labels: documentation, fix, requirements

#58 - Feedback fixes

Pull Request - State: closed - Opened by C-Achard about 1 year ago - 1 comment
Labels: enhancement, fix

#57 - User feedback improvements

Pull Request - State: closed - Opened by C-Achard about 1 year ago
Labels: enhancement, fix

#56 - .tif files restricted

Issue - State: closed - Opened by hausmanns about 1 year ago - 1 comment
Labels: enhancement, fix, feature request

#55 - WNet merger

Pull Request - State: closed - Opened by MMathisLab about 1 year ago - 2 comments

#54 - Update installation_guide.rst

Pull Request - State: closed - Opened by Timokleia about 1 year ago - 1 comment

#53 - Documentation update (Timokleia)

Pull Request - State: closed - Opened by Timokleia over 1 year ago - 1 comment

#52 - [WIP] GUI-less training example script

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 2 comments
Labels: enhancement, ML

#51 - Using autosummary to generate full API docs

Issue - State: open - Opened by C-Achard over 1 year ago
Labels: documentation, help wanted

#50 - Docs update & jupyter-books port

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 1 comment
Labels: documentation

#49 - Update colab_wnet_training.ipynb

Pull Request - State: closed - Opened by Timokleia over 1 year ago - 2 comments
Labels: documentation, enhancement, colab

#48 - WandB/Colab + docs

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 2 comments
Labels: ML, wandb, colab

#47 - WNet training

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 1 comment
Labels: enhancement, feature request, UI, ML

#46 - Temp fix for CRF

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 1 comment
Labels: fix, requirements

#45 - CRF and Cython issue

Issue - State: closed - Opened by C-Achard over 1 year ago - 3 comments
Labels: fix, requirements

#44 - Improved Utilities

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 1 comment
Labels: enhancement, UI

#43 - v1.0 Draft - Training improvements and fixes

Pull Request - State: open - Opened by C-Achard over 1 year ago - 2 comments
Labels: enhancement, fix, UI, ML

#42 - Additional tests

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 2 comments
Labels: pytest

#41 - Updates on the evaluation function

Pull Request - State: closed - Opened by C-Achard over 1 year ago - 1 comment
Labels: enhancement

#40 - Performance evaluation improvements

Pull Request - State: closed - Opened by gityves over 1 year ago - 1 comment
Labels: enhancement

#39 - Reducing requirements

Issue - State: closed - Opened by C-Achard almost 2 years ago - 1 comment
Labels: fix, requirements

#38 - Update pyproject.toml; minimal conda for m1

Pull Request - State: closed - Opened by MMathisLab almost 2 years ago - 3 comments
Labels: documentation, fix

#37 - Updated docs building action

Pull Request - State: closed - Opened by C-Achard almost 2 years ago
Labels: documentation

#36 - WNet + models code refactor

Pull Request - State: closed - Opened by C-Achard almost 2 years ago - 3 comments
Labels: enhancement, ML

#35 - Move docs to Jupyter Book

Issue - State: closed - Opened by C-Achard almost 2 years ago - 2 comments
Labels: documentation

#34 - Voronoi-Otsu labeling + instance segmentation code overhaul

Pull Request - State: closed - Opened by C-Achard almost 2 years ago - 1 comment
Labels: documentation, enhancement, UI

#33 - Weights download unavailable

Issue - State: closed - Opened by C-Achard about 2 years ago - 1 comment
Labels: bug, important!

#32 - model not found

Issue - State: closed - Opened by romainGuiet about 2 years ago - 4 comments
Labels: bug

#31 - CVE-2007-4559 Patch

Pull Request - State: closed - Opened by TrellixVulnTeam over 2 years ago - 1 comment

#30 - Show tqdm pbar from sliding_window_inference in the log widget

Issue - State: closed - Opened by C-Achard over 2 years ago - 1 comment
Labels: enhancement, help wanted

#29 - v0.0.1rc4

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: versioning

#28 - Interface overhaul

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 5 comments
Labels: documentation, enhancement, UI

#27 - Timer improvement

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: enhancement, UI

#26 - Inference on layer

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: enhancement, UI

#25 - `Stop request, waiting for next inference & saving to occur...` but then no inf. could occur due to user error

Issue - State: closed - Opened by MMathisLab over 2 years ago - 2 comments
Labels: good first issue, fix, UI

#24 - Improved pretrained weights usage

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: enhancement

#23 - Revert "[WIP] UI API overhaul + several features/fixes (#17)"

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 1 comment
Labels: enhancement, fix, UI, Do not merge

#22 - [TEST] Docstring fix

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: documentation, fix, Do not merge

#21 - Bug - Cannot select Images directory when file format .tiff is selected

Issue - State: closed - Opened by thecobb over 2 years ago - 1 comment
Labels: bug, feature request

#20 - Inference with VNet not running - RuntimeError in aborted thread

Issue - State: closed - Opened by thecobb over 2 years ago - 18 comments
Labels: question, ML

#19 - Moved weights download + enhancements

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 7 comments
Labels: enhancement, fix

#18 - Incorrect weights for TRAILMAP_MS ?

Issue - State: closed - Opened by C-Achard over 2 years ago - 5 comments
Labels: fix

#17 - UI API overhaul + several features/fixes

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 4 comments
Labels: enhancement, fix

#16 - v0.0.1rc3

Pull Request - State: closed - Opened by MMathisLab over 2 years ago - 3 comments
Labels: versioning

#15 - Documentation status

Issue - State: open - Opened by C-Achard over 2 years ago - 3 comments
Labels: documentation

#14 - Added more anisotropy handling + fix global in review

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 2 comments
Labels: enhancement, fix

#13 - Use of PyQt5>=5.15.6 in requirements

Issue - State: closed - Opened by goanpeca over 2 years ago - 2 comments
Labels: enhancement, fix

#12 - [WIP] Adding SwinUNetR

Pull Request - State: closed - Opened by vidalmaxime over 2 years ago - 7 comments
Labels: enhancement, ML

#11 - Various fixes

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 1 comment
Labels: fix

#10 - Bug fix in local installation & minor fixes in launch_review

Pull Request - State: closed - Opened by vidalmaxime over 2 years ago - 2 comments

#9 - Specification of input data

Issue - State: open - Opened by haesleinhuepf over 2 years ago - 1 comment
Labels: question

#8 - Updated plugin visibility for napari-hub

Pull Request - State: closed - Opened by C-Achard over 2 years ago - 1 comment

#7 - Apply inference to a single image that's already open (feature request?)

Issue - State: closed - Opened by haesleinhuepf over 2 years ago - 5 comments
Labels: enhancement, feature request

#6 - Mwm/download models

Pull Request - State: closed - Opened by MMathisLab over 2 years ago - 1 comment

#5 - from dev repo; merge into Main

Pull Request - State: closed - Opened by MMathisLab over 2 years ago - 1 comment

#4 - Mwm/update docs [WIP]

Pull Request - State: closed - Opened by MMathisLab over 2 years ago

#3 - Update README.md

Pull Request - State: closed - Opened by MMathisLab over 2 years ago

#2 - latest work from private repo

Pull Request - State: closed - Opened by C-Achard over 2 years ago

#1 - Update README.md

Pull Request - State: closed - Opened by MMathisLab almost 3 years ago

GitHub / AdaptiveMotorControlLab/CellSeg3d issues and pull requests