Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / AdaptiveMotorControlLab/CEBRA issues and pull requests

#200 - Concatenate last batches for batched inference

Pull Request - State: open - Opened by CeliaBenquet 4 days ago
Labels: ๐Ÿž fix

#197 - interactive plot doesn't seem to work

Issue - State: open - Opened by researcherofreality 12 days ago - 1 comment

#195 - Fix `scikit-learn` reference in conda environment files

Pull Request - State: closed - Opened by stes 16 days ago
Labels: CLA signed, ๐Ÿž fix

#194 - cebra_paper.yml needs updating

Issue - State: closed - Opened by researcherofreality 17 days ago - 4 comments
Labels: bug

#193 - Questions about implementing behavior decoding based on CEBRA

Issue - State: open - Opened by zhuyu2025 24 days ago - 4 comments

#192 - Experiencing error setting up multi-sessions

Issue - State: open - Opened by Gunnar-Stunnar 25 days ago - 1 comment

#190 - [WIP] Add improved goodness of fit implementation

Pull Request - State: open - Opened by stes 27 days ago - 1 comment
Labels: CLA signed

#189 - [WIP] Release 0.5.0

Pull Request - State: open - Opened by stes 27 days ago
Labels: CLA signed

#188 - Fix linting errors in tests

Pull Request - State: closed - Opened by stes 27 days ago
Labels: enhancement, CLA signed

#187 - Add additional tests for TensorDataset

Pull Request - State: closed - Opened by stes 27 days ago - 1 comment
Labels: CLA signed

#185 - Fix linting issues

Pull Request - State: closed - Opened by stes about 1 month ago - 4 comments
Labels: enhancement, CLA signed

#184 - Fix tests for upgraded dependencies

Pull Request - State: closed - Opened by stes about 1 month ago - 4 comments
Labels: CLA signed

#183 - Stop enforcing FloatTensor on TensorDataset

Pull Request - State: closed - Opened by icarosadero about 1 month ago - 6 comments
Labels: CLA signed

#180 - Set default offset to an Offset object

Pull Request - State: closed - Opened by icarosadero about 1 month ago - 4 comments
Labels: CLA signed, ๐Ÿž fix

#177 - Python package PR test doesn't pass because of a package compatibility issue

Issue - State: closed - Opened by CeliaBenquet about 2 months ago - 1 comment
Labels: bug

#176 - Change pytorch version in docs to stable

Pull Request - State: closed - Opened by CeliaBenquet about 2 months ago
Labels: CLA signed, ๐Ÿž fix

#175 - pytorch not recognized when building the docs

Issue - State: closed - Opened by CeliaBenquet about 2 months ago
Labels: bug

#174 - `TensorDataset.offset` is set to an `int` but `Dataset.offset` is set to an `Offset`

Issue - State: closed - Opened by CeliaBenquet 2 months ago - 1 comment
Labels: bug

#173 - Multi-session or multi-animal CEBRA mode use

Issue - State: closed - Opened by JorgeVindelAlfageme 3 months ago - 1 comment
Labels: question

#172 - Upgrade dependencies and fix testsuite

Pull Request - State: closed - Opened by stes 3 months ago
Labels: CLA signed, ๐Ÿž fix

#171 - Update build.yml --> python 3.12

Pull Request - State: closed - Opened by MMathisLab 3 months ago
Labels: CLA signed

#170 - Add device as arg to TensorDataset

Pull Request - State: closed - Opened by stes 3 months ago
Labels: CLA signed, ๐Ÿž fix

#169 - Add OS indepdent paths for monkey, hippocampus and synthetic data

Pull Request - State: closed - Opened by stes 3 months ago
Labels: documentation, CLA signed, ๐Ÿž fix

#168 - Batched inference CEBRA & padding at the `Solver` level

Pull Request - State: open - Opened by CeliaBenquet 3 months ago - 7 comments
Labels: enhancement, CLA signed

#167 - Add ruff for linting the codebase

Pull Request - State: closed - Opened by stes 3 months ago - 1 comment
Labels: enhancement, good first issue, CLA signed

#166 - Extend type checking to all float datatypes

Pull Request - State: closed - Opened by CeliaBenquet 3 months ago - 5 comments
Labels: enhancement, CLA signed

#164 - Update imports in pivae from `keras` to `tensorflow.keras`

Pull Request - State: closed - Opened by MMathisLab 4 months ago
Labels: CLA signed

#163 - Update installation.rst

Pull Request - State: closed - Opened by MMathisLab 4 months ago
Labels: documentation, CLA signed

#160 - Apply a trained model on a new dataset with different dimension

Issue - State: closed - Opened by snehashis-roy 4 months ago - 2 comments
Labels: question

#151 - Can CEBRA be used to map discrete data with discrete labels?

Issue - State: closed - Opened by YNCris 6 months ago - 1 comment

#150 - [WIP] Check tests in test_criterions.py

Pull Request - State: closed - Opened by stes 6 months ago - 2 comments
Labels: bug, CLA signed, high priority

#136 - Fix pandas intersphinx mapping; fix test setup

Pull Request - State: closed - Opened by stes 8 months ago - 3 comments
Labels: CLA signed

#135 - Implementation for discrete multisession

Pull Request - State: closed - Opened by introspective-swallow 8 months ago - 30 comments
Labels: enhancement, CLA signed

#131 - Normalized data produces different embedding

Issue - State: closed - Opened by melissaxdu 9 months ago - 1 comment

#128 - Automated adjustment of `n_bins` when discrete labels are passed

Issue - State: open - Opened by stes 9 months ago - 2 comments
Labels: enhancement

#123 - Fixed showlegend for plotly

Pull Request - State: closed - Opened by nastya236 11 months ago - 1 comment
Labels: CLA signed

#122 - Pass showlegend/template kwargs to plotly

Pull Request - State: closed - Opened by stes 11 months ago - 2 comments
Labels: CLA signed

#121 - Legend labels are not visible while using interactive plots

Issue - State: closed - Opened by nastya236 11 months ago - 2 comments
Labels: enhancement, good first issue

#120 - Update README.md

Pull Request - State: closed - Opened by MMathisLab 11 months ago
Labels: CLA signed

#119 - Update setup.cfg license classifier

Pull Request - State: closed - Opened by stes 11 months ago - 3 comments
Labels: CLA signed

#118 - Apply updated license headers

Pull Request - State: closed - Opened by stes 11 months ago - 5 comments
Labels: CLA signed

#117 - Change license to Apache 2.0

Pull Request - State: closed - Opened by stes 11 months ago
Labels: CLA signed

#116 - Release 0.4.0

Pull Request - State: closed - Opened by stes 11 months ago - 4 comments
Labels: CLA signed

#114 - Add missing error raising and test for `adapt` on Multissession

Pull Request - State: closed - Opened by CeliaBenquet 11 months ago
Labels: bug, CLA signed

#113 - Update icon link for dandi demo data

Pull Request - State: closed - Opened by MMathisLab 12 months ago
Labels: CLA signed

#112 - Update cebra_paper_m1.yml and cebra.yml

Pull Request - State: closed - Opened by MMathisLab 12 months ago
Labels: CLA signed

#111 - rc2 >> 0.3.1

Pull Request - State: closed - Opened by MMathisLab 12 months ago
Labels: CLA signed

#110 - Release 0.3.1

Pull Request - State: closed - Opened by stes 12 months ago - 3 comments
Labels: CLA signed, release

#108 - KeyError with `cebra.fit(adapt=True)` on multi-session embeddings (only)

Issue - State: closed - Opened by FedeClaudi about 1 year ago - 3 comments
Labels: bug, enhancement

#104 - Release v0.3.1rc1

Pull Request - State: closed - Opened by stes about 1 year ago - 3 comments
Labels: CLA signed, release

#103 - Restructure API docs for integrations

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: CLA signed

#102 - Simplify plotly docstring example

Pull Request - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: CLA signed

#101 - Add parameters for MixedDataLoader

Pull Request - State: open - Opened by timonmerk about 1 year ago - 5 comments
Labels: enhancement, CLA signed

#99 - Add torch API usage example

Pull Request - State: closed - Opened by timonmerk about 1 year ago - 5 comments
Labels: documentation, CLA signed

#98 - Update usage.rst

Pull Request - State: closed - Opened by MMathisLab about 1 year ago
Labels: documentation, CLA signed

#97 - Adding example script with custom Loader for PyTorch API documentation

Issue - State: closed - Opened by timonmerk about 1 year ago - 3 comments
Labels: documentation, enhancement

#96 - Auto-import plotly integration

Pull Request - State: closed - Opened by MMathisLab about 1 year ago
Labels: documentation, CLA signed

#93 - Is CEBRA suitable for Windows system?

Issue - State: closed - Opened by Albertvicient about 1 year ago - 2 comments

#92 - Release v0.3.0

Pull Request - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: CLA signed, release

#91 - Pin `tables` <= 3.8

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: CLA signed

#90 - Fix windows tests

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#89 - Fix windows test

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#88 - Add OS independent paths for Allen dataset

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#87 - Fix consistency labels ordering and simplify

Pull Request - State: closed - Opened by CeliaBenquet about 1 year ago
Labels: CLA signed

#86 - Fix broadcasting in InfoNCE loss

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: CLA signed

#85 - Enhance `ModuleNotFoundError` messages

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: documentation, CLA signed

#84 - Plotly integration

Pull Request - State: closed - Opened by nastya236 about 1 year ago - 1 comment
Labels: CLA signed

#83 - Nastya/interactive plots rebased

Pull Request - State: closed - Opened by nastya236 about 1 year ago
Labels: CLA signed

#82 - Add interactive plots using plotly

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: enhancement, CLA signed

#80 - Update installation.rst

Pull Request - State: closed - Opened by MMathisLab about 1 year ago
Labels: CLA signed

#79 - Include windows tests

Pull Request - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: enhancement, CLA signed

#78 - cebra.datasets.init throws IndexError (allen demo)

Issue - State: closed - Opened by EricThomson about 1 year ago - 4 comments

#77 - error messages for missing extra dependencies

Issue - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: documentation, enhancement

#76 - Extend Delta distribution to multiple dimensions

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#74 - Apple M1 GPU not supported in CEBRA env created from cebra_paper_m1.yml file

Issue - State: closed - Opened by anna-teruel about 1 year ago - 5 comments

#71 - Add thumbnail for openscope notebook

Pull Request - State: closed - Opened by stes about 1 year ago
Labels: CLA signed

#70 - Improve documentation for local docs build

Pull Request - State: closed - Opened by stes about 1 year ago - 3 comments
Labels: CLA signed

#69 - Improve saving and loading of models

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#68 - Autodownload synthetic data

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#67 - Release v0.3.0rc2

Pull Request - State: closed - Opened by stes about 1 year ago - 6 comments
Labels: CLA signed, release

#66 - Release 0.3.0rc1

Pull Request - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: CLA signed, release

#65 - Update build.yml

Pull Request - State: closed - Opened by MMathisLab about 1 year ago
Labels: CLA signed

#64 - add demo link to homepage

Pull Request - State: closed - Opened by MMathisLab about 1 year ago
Labels: CLA signed

#63 - Can CEBRA use 2d or 3d position as label?

Issue - State: closed - Opened by cnwangy about 1 year ago - 3 comments
Labels: enhancement

#62 - Fix test failures due to http rate limit

Pull Request - State: closed - Opened by stes about 1 year ago - 1 comment
Labels: CLA signed

#59 - Autodownload monkey reaching data

Pull Request - State: closed - Opened by gonlairo about 1 year ago
Labels: CLA signed

#58 - FileNotFoundError when trying to run demo by Colab

Issue - State: closed - Opened by wky17 over 1 year ago - 2 comments

#57 - About failed to read the hdf5 file

Issue - State: closed - Opened by CHENGHUAN555 over 1 year ago - 4 comments

#56 - Sampling around reference samples (ie conditional='delta') with auxiliary dimension > 1

Issue - State: closed - Opened by azylbertal over 1 year ago - 2 comments
Labels: enhancement

#55 - Fix type bug in to() method

Pull Request - State: closed - Opened by sofiagilardini over 1 year ago - 10 comments
Labels: bug, CLA signed

#54 - Add test for consistency plotting; fix plotting for unordered dataset ids

Pull Request - State: closed - Opened by stes over 1 year ago - 1 comment
Labels: bug, CLA signed

#53 - Add Matplotlib ImportError when using compare_models()

Pull Request - State: closed - Opened by gonlairo over 1 year ago
Labels: CLA signed

#52 - Add missing mark in test_datasets.py

Pull Request - State: closed - Opened by gonlairo over 1 year ago
Labels: CLA signed