Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / AUTODIAL/AutoEIS issues and pull requests

#136 - Issue with Julia import

Issue - State: open - Opened by fg-personal about 2 months ago

#135 - Fix incorrect order of freq and Z when calling EC.jl

Pull Request - State: closed - Opened by ma-sadeghi 3 months ago
Labels: bug

#134 - Order of `freq` and `Z` is wrong in calls to EC.jl

Issue - State: closed - Opened by ma-sadeghi 3 months ago
Labels: bug

#133 - Correct the argument order of frequency and impedance in calls to EC.jl

Pull Request - State: closed - Opened by RunzeZhang123 3 months ago - 2 comments
Labels: bug

#132 - Major upgrade to `fit_circuit_parameters` for more robust/accurate fits

Pull Request - State: closed - Opened by ma-sadeghi 3 months ago
Labels: enhancement

#131 - Fix ECM fitter not updating `p0` on next iterations

Pull Request - State: closed - Opened by ma-sadeghi 3 months ago
Labels: bug

#130 - `iters` has no effect on `fit_circuit_parameters`!

Issue - State: closed - Opened by ma-sadeghi 3 months ago
Labels: bug

#129 - Automatically remove Julia environment when `import autoeis` fails

Pull Request - State: closed - Opened by SaraQiuyuShi 3 months ago
Labels: enhancement

#128 - Removing Julia environment fixes most of `import autoeis` failures

Issue - State: closed - Opened by ma-sadeghi 3 months ago
Labels: bug

#127 - Add a dummy change to README

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago

#126 - Drop `numpy` version upper bound when `impedance.py` is patched

Issue - State: open - Opened by ma-sadeghi 4 months ago
Labels: maintenance

#125 - Augment `fit_circuit_parameters` to accept `bounds` as input argument

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago
Labels: enhancement

#123 - Address JOSS comments + prepare for v1.0 release

Pull Request - State: closed - Opened by ma-sadeghi 4 months ago

#121 - Create a Streamlit app for straightforward access for non-coders

Issue - State: open - Opened by RunzeZhang123 5 months ago
Labels: enhancement

#120 - Integrate the minimal frequency identification into AutoEIS

Issue - State: open - Opened by RunzeZhang123 5 months ago
Labels: enhancement

#119 - Allow for customized element boundaries in `fit_circuit_parameters`

Issue - State: closed - Opened by RunzeZhang123 6 months ago
Labels: enhancement

#118 - Provide a collection of circuit structures to skip the GEP step

Issue - State: open - Opened by RunzeZhang123 6 months ago
Labels: enhancement

#117 - Allow customized parameter boundaries for `utils.fit_circuit_parameters`

Issue - State: closed - Opened by RunzeZhang123 6 months ago - 1 comment
Labels: duplicate

#116 - How to inspect the filtered points during pre-processing

Issue - State: open - Opened by RunzeZhang123 6 months ago - 3 comments
Labels: enhancement, question

#115 - Provide a way to fine tune a found ECM based on some heuristic rules

Issue - State: open - Opened by ma-sadeghi 7 months ago
Labels: proposal

#113 - Design an interface for BI output

Issue - State: closed - Opened by ma-sadeghi 8 months ago
Labels: enhancement

#112 - Add the refined automated ECM evaluation function

Issue - State: open - Opened by RunzeZhang123 8 months ago - 1 comment
Labels: enhancement

#111 - Add more examples for JOSS review

Issue - State: closed - Opened by ma-sadeghi 8 months ago - 7 comments
Labels: documentation

#108 - Add instructions on input data format

Pull Request - State: open - Opened by RunzeZhang123 8 months ago - 1 comment

#105 - Create a minimal GUI

Issue - State: closed - Opened by ma-sadeghi 8 months ago - 1 comment
Labels: enhancement

#104 - Make `suppress_output` compatible with Windows

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago

#103 - Circuits ranking information has been removed from the inference output

Issue - State: closed - Opened by ma-sadeghi 8 months ago
Labels: enhancement

#102 - Augment Bayesian inference results with fitness metrics

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago

#101 - Prepare for next release v0.0.27

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago

#100 - Migrate from flat to src layout

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago
Labels: maintenance

#99 - Prepare for next release v0.0.26

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago

#98 - Fix regression in parallel inference

Pull Request - State: closed - Opened by ma-sadeghi 8 months ago
Labels: bug

#97 - Wide posterior range possibly because low frequency measurements are effectively ignored

Issue - State: open - Opened by benjamin5988 9 months ago - 1 comment
Labels: enhancement

#95 - Julia 1.10.1+ breaks automatic installation of AutoEIS

Issue - State: closed - Opened by benjamin5988 9 months ago - 2 comments
Labels: bug

#94 - `jax >= 0.4.24` breaks `multiprocessing` using `fork` as start method

Issue - State: closed - Opened by ma-sadeghi 9 months ago - 4 comments
Labels: bug

#93 - `perform_full_analysis` called with wrong argument order in documentation

Issue - State: closed - Opened by benjamin5988 10 months ago - 5 comments

#92 - Parallel inference on multiple EIS datasets potentially breaking

Issue - State: closed - Opened by ma-sadeghi 10 months ago - 1 comment
Labels: bug

#91 - Prepare for next release v0.0.25

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#90 - Add new parameter fitter

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement

#89 - Drop support for Python 3.9, add support for 3.12

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#88 - Prepare for next release v0.0.24

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#87 - CSV problem when saving filtered ECM with v.0.0.21

Issue - State: closed - Opened by RonM700 10 months ago - 1 comment

#86 - Migrate to JuliaCall from PyJulia

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement

#85 - Fix Julia wrapper bug (conda-pyjulia clash)

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: bug

#84 - Expose maximum function evals `maxfev` as input arg for `fit_circuit_parameters`

Issue - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement

#83 - Parameter fitter is not robust

Issue - State: open - Opened by ma-sadeghi 10 months ago - 1 comment
Labels: enhancement

#82 - Missing docstrings for some key functions

Issue - State: closed - Opened by ma-sadeghi 10 months ago
Labels: documentation

#80 - Prepare for next release v0.0.23

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#79 - Example notebook(s) is not tested

Issue - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#77 - Add Action to test notebooks + fix backend import bug

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: bug, maintenance

#76 - Unify serial and parallel inference helper functions

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement

#75 - Improperly initialized Julia environment

Issue - State: closed - Opened by RonM700 10 months ago - 21 comments
Labels: bug

#74 - Prepare for next release v0.0.22

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago

#73 - Parallelize Bayesian inference

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement

#72 - Testing PR workflow

Pull Request - State: closed - Opened by RunzeZhang123 10 months ago

#71 - Release v0.0.21

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago

#69 - Parallelize GEP using Julia multiprocessing

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement, maintenance

#68 - Fix nightly build's occasional failure

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: enhancement, maintenance

#67 - Fix sklearn's `mean_squared_error` deprecation

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: maintenance

#66 - Fix minor bugs and other things!

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago

#65 - Fix minor bugs and other things!

Pull Request - State: closed - Opened by ma-sadeghi 10 months ago
Labels: bug, enhancement, maintenance

#64 - `Attribute Error` in `plot_*` modules

Issue - State: closed - Opened by RonM700 10 months ago - 4 comments

#63 - Drop support for Python 3.9 on April 4, 2024 (add 3.12)

Issue - State: closed - Opened by ma-sadeghi 12 months ago
Labels: maintenance

#62 - Improve documentation for JOSS submission

Pull Request - State: closed - Opened by ma-sadeghi 12 months ago
Labels: documentation

#61 - Unify requirements files in pyproject.toml

Pull Request - State: closed - Opened by ma-sadeghi 12 months ago
Labels: maintenance

#60 - Requirements files need to be unified in pyproject.toml

Issue - State: closed - Opened by ma-sadeghi 12 months ago
Labels: maintenance

#58 - Prepare for the release of v0.0.18

Pull Request - State: closed - Opened by ma-sadeghi 12 months ago

#57 - Add IO helpers to load the built-in test dataset

Pull Request - State: closed - Opened by ma-sadeghi 12 months ago
Labels: enhancement

#55 - `split_components` breaks if `Parameters` contains integer values

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#54 - `ohmic_resistance_filter` doesn't always do what it's suppoed to

Issue - State: closed - Opened by ma-sadeghi about 1 year ago - 1 comment
Labels: bug

#53 - Refactor `preprocess_impedance_data` for clarity and simplicity

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: enhancement, maintenance

#52 - Make `find_ohmic_resistance` more robust

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#51 - `find_ohmic_resistance` assumes frequency is sorted in descending order

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#50 - Fix incorrect CPE math expression

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago

#48 - Refactor the inner workings of the Bayesian inference step

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug, enhancement

#47 - Plotting functions for Bayesian inference are buried under `perform_bayesian_inference`

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: enhancement

#46 - Same random seed is used during Bayesian inference

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#45 - `ohmic_resistance_filter` is too strict / not robust against noisy data

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#44 - Add unit tests for each circuit element

Issue - State: closed - Opened by ma-sadeghi about 1 year ago - 1 comment
Labels: maintenance

#43 - Update the formula for CPE element to match EquivalentCircuits.jl

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: bug

#42 - Results dataframe shouldn't store stringified version of the objects that it stores

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: enhancement

#41 - `apply_heuristic_rules` should not modify dataframe's structure (i.e., columns)

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: enhancement

#40 - Incorrect formulate used for CPE elements

Issue - State: closed - Opened by RunzeZhang123 about 1 year ago
Labels: bug

#39 - Add documentation and deploy to GitHub Pages

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: documentation

#38 - Figure in README illegible in browser dark mode

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: documentation

#37 - Update CI workflows to use `pytest`

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: maintenance

#36 - Update workflow to use pytest or other test suite

Issue - State: closed - Opened by eddotman about 1 year ago
Labels: maintenance

#35 - Feature: Factored scatterplot size out of function

Pull Request - State: closed - Opened by eddotman about 1 year ago
Labels: enhancement

#34 - Switching between virtualenvs might break functions parallelized using multiprocessing

Issue - State: closed - Opened by ma-sadeghi about 1 year ago - 2 comments
Labels: bug

#32 - Compatible data file format(s) for EIS measurements are not exlained well

Issue - State: open - Opened by ma-sadeghi about 1 year ago - 2 comments
Labels: documentation

#31 - Add continuous integration and testing

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: maintenance

#30 - Refactor notebook plots using `ipywidgets`

Issue - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: documentation

#29 - Parallelize equivalent circuit evolution

Pull Request - State: closed - Opened by ma-sadeghi about 1 year ago
Labels: enhancement