Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ANTsX/ANTsPy issues and pull requests

#480 - Similarity option typo made "ANTSNeighborhoodCorrelation" unreachable

Pull Request - State: closed - Opened by cookpa about 1 year ago

#479 - Got the same results when using ants.image_similarity with different types

Issue - State: closed - Opened by Mo-Junyang about 1 year ago - 6 comments

#478 - Transformation Matrix discrepancy

Issue - State: closed - Opened by roohy466 about 1 year ago - 8 comments

#477 - ENH: Add initial velocity field capabilities.

Pull Request - State: closed - Opened by ntustison about 1 year ago

#476 - ENH: applytransforms: dont force compose as nii.gz

Pull Request - State: closed - Opened by MSco about 1 year ago - 3 comments

#474 - ENH: Support vector images stored as double

Pull Request - State: closed - Opened by cookpa about 1 year ago - 3 comments

#473 - Feat/cbar for ortho plot

Pull Request - State: closed - Opened by gladomat about 1 year ago - 1 comment

#472 - Jacobian determinant

Issue - State: closed - Opened by devDonnn about 1 year ago - 8 comments

#471 - Intermittent test failures on Windows

Issue - State: open - Opened by cookpa about 1 year ago - 4 comments
Labels: help wanted, distribution

#470 - Linking errors on powerpc builds

Issue - State: open - Opened by cookpa about 1 year ago - 1 comment
Labels: help wanted

#469 - Rewrite Windows tests

Pull Request - State: closed - Opened by cookpa about 1 year ago - 1 comment

#468 - ants.resample_image_to_target() giving empty/blank image output.

Issue - State: closed - Opened by Sam291998 about 1 year ago - 2 comments

#467 - Update README.md

Pull Request - State: closed - Opened by andrewstenger about 1 year ago

#466 - 'SynOnly' transform option is still performing an affine step in ANTsPy

Issue - State: closed - Opened by dontminchenit about 1 year ago - 5 comments

#465 - ENH: Make pcasl available in get_ants_data

Pull Request - State: closed - Opened by ntustison about 1 year ago

#464 - Wrong transform matrix on 2D rigid transformation

Issue - State: closed - Opened by tigerhu7 about 1 year ago - 3 comments

#463 - antspyx==0.3.2 does not exist

Issue - State: closed - Opened by JBarsotti about 1 year ago - 4 comments

#462 - BUG: Typo

Pull Request - State: closed - Opened by ntustison about 1 year ago

#461 - Failing tests

Issue - State: closed - Opened by cookpa about 1 year ago - 8 comments

#460 - ENH: Add thin-plate splines.

Pull Request - State: closed - Opened by ntustison about 1 year ago

#459 - updated build_template with affine shape correction

Pull Request - State: closed - Opened by richardbeare about 1 year ago - 1 comment

#458 - 'abpBrainExtraction' function in ANTsPY

Issue - State: closed - Opened by zbjbiubiubiu about 1 year ago - 1 comment

#457 - ENH: default n3 / n4 spline mesh size of 1

Pull Request - State: closed - Opened by cookpa about 1 year ago

#456 - ENH: Registration masks use all voxels != 0

Pull Request - State: closed - Opened by cookpa about 1 year ago

#455 - ENH: Fix metric masks in registration

Pull Request - State: closed - Opened by cookpa about 1 year ago - 1 comment

#454 - Compatibility with Point Clouds / 3D Meshes?

Issue - State: closed - Opened by desaibhargav about 1 year ago - 9 comments

#453 - Failed to allocate memory for image Error

Issue - State: closed - Opened by novafae about 1 year ago - 5 comments

#452 - Mask preprocessing in registration

Issue - State: closed - Opened by cookpa about 1 year ago - 1 comment
Labels: enhancement

#451 - A installation problem on centos 7

Issue - State: closed - Opened by tangqishi about 1 year ago - 4 comments

#450 - Support for a slightly more flexible use of masks

Pull Request - State: closed - Opened by azylbertal about 1 year ago - 2 comments

#449 - Masking for the linear transformation (and for the moving image)

Issue - State: closed - Opened by azylbertal about 1 year ago - 3 comments
Labels: help wanted, would be nice

#448 - FA to MNI registration via T1w composite transform is off by a few mms

Issue - State: closed - Opened by ajschadler12 about 1 year ago - 1 comment

#447 - Compose and write field

Issue - State: closed - Opened by mathxiaobin about 1 year ago - 2 comments

#446 - Dealing with large spikes in intensity

Issue - State: closed - Opened by ClarkQTIM over 1 year ago - 6 comments

#445 - Generate python 3.11 wheels

Pull Request - State: closed - Opened by tfmoraes over 1 year ago - 1 comment

#444 - WIP: attach wheels to releases

Pull Request - State: closed - Opened by cookpa over 1 year ago

#443 - ENH: Check for test failures on windows

Pull Request - State: closed - Opened by cookpa over 1 year ago - 1 comment
Labels: help wanted

#442 - ENH: Read / Write windows pointers

Pull Request - State: closed - Opened by cookpa over 1 year ago - 2 comments

#441 - GPU Support (How to make registration faster)

Issue - State: closed - Opened by NirutaDhimal over 1 year ago - 3 comments

#440 - ENH: Separate wheel artifacts

Pull Request - State: closed - Opened by cookpa over 1 year ago - 3 comments

#439 - Test workflows

Pull Request - State: closed - Opened by cookpa over 1 year ago - 2 comments

#438 - ENH: Bump ANTs version to read Windows pointers

Pull Request - State: closed - Opened by cookpa over 1 year ago - 14 comments

#437 - ITK ERROR: CenteredTransformInitializer: Fixed Image has not been set

Issue - State: closed - Opened by amirreza1998 over 1 year ago - 27 comments

#436 - Running a non-rigid deformation without any rigid deformations

Issue - State: closed - Opened by ClarkQTIM over 1 year ago - 2 comments

#434 - Question: registration transform space

Issue - State: closed - Opened by dipterix over 1 year ago - 5 comments

#433 - WIP: Add time-varying point set transform fitting.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 1 comment

#432 - Export the n4 bias field.

Issue - State: closed - Opened by WeiquanLuo over 1 year ago - 3 comments

#431 - Rigid registration not rotating

Issue - State: closed - Opened by yonibrowning over 1 year ago - 2 comments

#430 - No module named 'ants.lib.addNoiseToImage' in python 3.9 on MacOS latest

Issue - State: closed - Opened by Remi-Gau over 1 year ago - 5 comments

#429 - Resample_images() crashes kernel

Issue - State: closed - Opened by ninea-anasovi over 1 year ago - 5 comments

#428 - ANTsImage.new_image_like() creates image with different header information

Issue - State: closed - Opened by pogos-ed over 1 year ago - 4 comments

#427 - Reproduce transform.apply_to_image by torch.nn.grid_sample

Issue - State: closed - Opened by BailiangJ over 1 year ago - 8 comments

#426 - COMP: Add support for python 3.11, remove 3.6 from CI build wheels

Pull Request - State: closed - Opened by cookpa over 1 year ago - 8 comments

#425 - MemoryError: std::bad_alloc when opening forward transform .mat files

Issue - State: closed - Opened by nal10 over 1 year ago - 10 comments

#423 - antspyx.readthedocs.io vs antspy.readthedocs.io

Issue - State: closed - Opened by cookpa over 1 year ago - 7 comments

#422 - Results are flipped when using ants.apply_transforms()

Issue - State: closed - Opened by DimitriosGk over 1 year ago - 15 comments

#421 - test `macos_arm64` and `linux_aarch64` wheel builds on GA

Pull Request - State: closed - Opened by ravnoor over 1 year ago - 3 comments

#420 - ENH: Add collapse strategy option.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 4 comments

#419 - ENH: Change collapse strategy.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 1 comment

#418 - crop_indices

Issue - State: closed - Opened by samtorrisi over 1 year ago - 2 comments

#417 - ANTs documentation

Issue - State: closed - Opened by ninusch over 1 year ago - 2 comments

#416 - ENH: Add verbose and additional outputs.

Pull Request - State: closed - Opened by ntustison over 1 year ago

#415 - WIP: Time-varying transform for landmarks.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 1 comment

#414 - ENH: Integrate velocity field.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 1 comment

#413 - WIP: SyN landmarks.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 3 comments

#412 - ENH: Compose fields.

Pull Request - State: closed - Opened by ntustison over 1 year ago

#411 - Invert field

Pull Request - State: closed - Opened by ntustison over 1 year ago

#410 - Documentation Ants Parameters

Issue - State: closed - Opened by ninusch over 1 year ago - 2 comments

#409 - The 2D registration results are dark

Issue - State: open - Opened by LexTran over 1 year ago - 7 comments

#407 - WIP: Add xfrm option for BRATs pipeline.

Pull Request - State: closed - Opened by ntustison over 1 year ago - 3 comments

#406 - Vector field

Issue - State: closed - Opened by ninusch over 1 year ago - 1 comment

#405 - cosineWindowedSinc option for resampling functions not working

Issue - State: closed - Opened by spichardo over 1 year ago - 1 comment

#404 - Error converting an image from template space to subject space

Issue - State: closed - Opened by kspruthviraj over 1 year ago - 1 comment

#403 - Affine registration of T1 to T2star (Brain MRI) Problem

Issue - State: closed - Opened by DimitriosGk almost 2 years ago - 10 comments

#402 - Cannot run ants.registration in HPC (slurm)

Issue - State: open - Opened by mikami520 almost 2 years ago - 14 comments

#401 - Creating Templates with Masks

Issue - State: closed - Opened by FIrgolitsch almost 2 years ago - 1 comment

#400 - Different results using ants.image_write and .numpy()

Issue - State: closed - Opened by d5423197 almost 2 years ago - 2 comments

#399 - Draft: Segmentation fault in `atropos()` if more than 9 temporary files are created

Pull Request - State: closed - Opened by phistep almost 2 years ago - 1 comment

#398 - Why isn't there a windows version? Compiled whl files

Issue - State: closed - Opened by 464hee almost 2 years ago - 25 comments
Labels: enhancement, help wanted

#397 - ENH: Add access to spline distance.

Pull Request - State: closed - Opened by ntustison almost 2 years ago

#396 - resampling to new voxel

Issue - State: closed - Opened by dilekozkan almost 2 years ago - 12 comments

#395 - ENH: Add multi-metric for antsRegistrationSyN family

Pull Request - State: closed - Opened by ntustison almost 2 years ago

#394 - ENH: Remove learn rate once option.

Pull Request - State: closed - Opened by ntustison almost 2 years ago

#392 - deformation fields as manipulatable numpy arrays?

Issue - State: closed - Opened by samtorrisi almost 2 years ago - 7 comments

#391 - No wheel available for python 3.10 on PyPI

Issue - State: closed - Opened by JescoS almost 2 years ago - 1 comment

#390 - plot failed with axis =2

Issue - State: open - Opened by ibowennn almost 2 years ago - 1 comment

#389 - BUG: kelly_kapowski its parameter needs brackets

Pull Request - State: closed - Opened by cookpa almost 2 years ago - 1 comment

#387 - add a link to the discussion

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago

#386 - Opening figures in docker

Issue - State: closed - Opened by gaucijean almost 2 years ago - 2 comments

#385 - Multi resolution (quantitatively)/"reg_iterations"

Issue - State: closed - Opened by ninusch almost 2 years ago - 1 comment

#384 - right operands not implemented

Issue - State: closed - Opened by rueberger about 2 years ago - 1 comment

#383 - Hotfix 380

Pull Request - State: closed - Opened by rueberger about 2 years ago - 3 comments

#382 - Hotfix 378

Pull Request - State: closed - Opened by rueberger about 2 years ago - 1 comment

#381 - installations issues with CentOS7 affecting 0.3.3 and 0.3.2

Issue - State: open - Opened by rueberger about 2 years ago - 1 comment