ANGSD/angsd issues and pull requests

#445 - SAF values aren't always consistent with actual reads?

Issue - State: closed - Opened by TeresaPegan almost 3 years ago - 14 comments

#434 - Consistent issues estimating folded SFS

Issue - State: open - Opened by gibsonMatt about 3 years ago - 1 comment

#421 - How can I use realSFS.old? (to view contents of .fst.gz files)

Issue - State: closed - Opened by TeresaPegan about 3 years ago - 6 comments

#409 - Use imputed genotype posteriors

Issue - State: closed - Opened by aguilar-gomez over 3 years ago - 1 comment

#408 - AD Not Being Written on .BCF.

Issue - State: open - Opened by g-pacheco over 3 years ago - 5 comments

#407 - Bootstrap creating the same 2dSFS over and over

Issue - State: open - Opened by emilya21 over 3 years ago - 2 comments

#396 - Issue using realSFS with conda install

Issue - State: closed - Opened by shannonekj over 3 years ago - 3 comments

#394 - pervasive segmentation faults in ANGSD0.935/htslib1.12

Issue - State: closed - Opened by TeresaPegan over 3 years ago - 11 comments

#381 - NGSadmix cross validation between K?

Issue - State: closed - Opened by Jungal10 over 3 years ago - 3 comments

#371 - The -rf doesn't seem to work with realSFS

Issue - State: closed - Opened by ashotmarg almost 4 years ago - 2 comments

#329 - Correction and Scaling of Diversity Estimators in Theta Sliding Window Output (pestPG file)

Issue - State: closed - Opened by Callithrix-omics over 4 years ago - 8 comments

#316 - computation of theta stats from folded SFS returns "-nan"

Issue - State: closed - Opened by danielazarate over 4 years ago - 3 comments

#258 - -doSaf produces unsorted positions and mixes up chromosomes

Issue - State: closed - Opened by martabe about 5 years ago - 17 comments

#255 - Segmentation fault (core dumped)

Issue - State: open - Opened by rillaxy about 5 years ago - 15 comments

#231 - beagle genotype posteriors as input (-doSaf 4 and -beagle)

Issue - State: closed - Opened by shannonekj over 5 years ago - 3 comments

#190 - 2D SFS

Issue - State: closed - Opened by kritikamgarg almost 6 years ago - 5 comments

Ecosyste.ms: Issues

GitHub / ANGSD/angsd issues and pull requests