ANCPLabOldenburg/ancp-bids issues and pull requests

#88 - Changes to create intermediate Artifact

Pull Request - State: closed - Opened by Jeenashaji 22 days ago

#87 - Create a PyTorch Dataset from a BIDS Dataset

Issue - State: closed - Opened by erdalkaraca about 2 months ago
Labels: enhancement

#86 - add option to save intermediate results

Issue - State: closed - Opened by AaronReer 2 months ago - 1 comment
Labels: enhancement, help wanted

#85 - add

Issue - State: closed - Opened by AaronReer 2 months ago

#84 - iquery_entities() error when having not-yet-written in-memory artifact

Issue - State: open - Opened by Evgeniia-Gapontseva 3 months ago
Labels: bug

#83 - Generating new schema for v1.9.0

Pull Request - State: closed - Opened by Jeenashaji 5 months ago - 2 comments

#82 - query_entities(scope='derivatives') - unexpected results

Issue - State: closed - Opened by Evgeniia-Gapontseva 6 months ago - 5 comments
Labels: help wanted

#81 - Query for CTF data

Issue - State: closed - Opened by Evgeniia-Gapontseva 6 months ago - 2 comments
Labels: help wanted

#80 - Type error when writing metadata with ancpBIDS

Issue - State: open - Opened by ancpJR 10 months ago

#79 - Ractivate BIDSLayout compatibility layer

Issue - State: closed - Opened by ancpJR 10 months ago - 1 comment

#78 - Unpin the wheel build dependency

Pull Request - State: closed - Opened by tjni over 1 year ago

#77 - cut a release

Issue - State: closed - Opened by yarikoptic almost 2 years ago - 1 comment

#76 - codespell: config, workflow, typo fixes

Pull Request - State: closed - Opened by yarikoptic almost 2 years ago - 1 comment

#75 - Long form entities for Artifact.get_entities()

Issue - State: closed - Opened by adelavega about 2 years ago - 1 comment

#74 - FIX: Return long-form entities

Pull Request - State: closed - Opened by adelavega about 2 years ago

#73 - Error when using ancpbids with multiprocessing

Issue - State: open - Opened by ghisvail about 2 years ago - 5 comments
Labels: enhancement

#72 - Split generated model module into base and version specific parts

Issue - State: closed - Opened by erdalkaraca about 2 years ago

#71 - Missing required node Version at ???.'

Issue - State: open - Opened by adelavega about 2 years ago - 1 comment

#70 - drop auto build for Python 3.6

Issue - State: closed - Opened by erdalkaraca about 2 years ago - 2 comments

#69 - Return true absolute path

Issue - State: closed - Opened by adelavega about 2 years ago - 2 comments

#67 - Enable filtering of specific subject session pairs

Issue - State: open - Opened by ghisvail about 2 years ago - 17 comments

#66 - No `entities_` attribute in self.schema.EntityEnum

Issue - State: closed - Opened by adelavega about 2 years ago - 6 comments

#65 - Some issues on writing derivatives

Issue - State: closed - Opened by erdalkaraca about 2 years ago - 2 comments

#64 - Writing derivatives does not work if derivatives subfolder does not exist

Issue - State: closed - Opened by AaronReer over 2 years ago
Labels: bug

#63 - Provide convenience function for entities of derivative

Issue - State: closed - Opened by AaronReer over 2 years ago - 2 comments
Labels: enhancement

#62 - Provide examples on how to write BIDS derivative datasets

Issue - State: open - Opened by ghisvail over 2 years ago - 1 comment
Labels: documentation

#61 - Allow non-strict BIDS naming scheme

Issue - State: open - Opened by lmichalke over 2 years ago - 7 comments
Labels: enhancement

#60 - Adapt model code generation to the upcoming 1.8.0

Issue - State: closed - Opened by erdalkaraca over 2 years ago

#59 - `BIDSLayout.get()` returns a massive wall of text in interactive interpreters

Issue - State: closed - Opened by pvandyken over 2 years ago - 3 comments
Labels: enhancement

#58 - Invalid parameters are frequently silently ignored

Issue - State: open - Opened by pvandyken over 2 years ago - 2 comments
Labels: enhancement, good first issue

#57 - Load TSV data as records, ndarray or dataframe

Pull Request - State: closed - Opened by ghisvail over 2 years ago - 1 comment

#56 - Remove dependency on numpy

Issue - State: closed - Opened by ghisvail over 2 years ago - 13 comments

#55 - Create a facade to different storage backends

Issue - State: open - Opened by erdalkaraca over 2 years ago
Labels: enhancement

#54 - allow filtering for events using HED tags or known column names

Issue - State: open - Opened by erdalkaraca almost 3 years ago
Labels: enhancement

#53 - make BIDSLayout.get() filters available on any graph Folder node

Issue - State: closed - Opened by erdalkaraca almost 3 years ago
Labels: enhancement

#52 - [WIP]: Integrating ancpbids with pybids

Pull Request - State: closed - Opened by gkiar almost 3 years ago - 5 comments

#51 - some minor cosmetic changes e.g. shorten output in code cells

Pull Request - State: closed - Opened by AaronReer almost 3 years ago - 1 comment

#50 - Docs: Add section about inheritance principle

Issue - State: open - Opened by erdalkaraca almost 3 years ago
Labels: documentation

#49 - Extend benchmark to have a more exhaustive comparison to pybids

Issue - State: open - Opened by erdalkaraca almost 3 years ago

#48 - testdata not BIDS conform

Issue - State: open - Opened by AaronReer almost 3 years ago

#47 - tabs for user documentation and preliminary advanced queries documentation added

Pull Request - State: closed - Opened by AaronReer almost 3 years ago

#46 - Use dataclasses instead of properties in generated model classes

Issue - State: open - Opened by erdalkaraca almost 3 years ago
Labels: enhancement

#45 - Add missing entities to file name if inferrable

Issue - State: closed - Opened by erdalkaraca almost 3 years ago
Labels: bug

#44 - Add .bidsignore

Issue - State: closed - Opened by azubaidi84 almost 3 years ago - 1 comment

#43 - Documentation missing for important functions

Issue - State: closed - Opened by bthirion almost 3 years ago - 2 comments

#42 - AttributeError on BIDSLayout.get_entities()

Issue - State: closed - Opened by erdalkaraca almost 3 years ago - 1 comment

#41 - Output of the load_contents() function

Issue - State: closed - Opened by AaronReer almost 3 years ago - 1 comment

#40 - Added MEG user documentation

Pull Request - State: closed - Opened by AaronReer almost 3 years ago - 1 comment

#39 - Documentation of more complex query API is missing

Issue - State: open - Opened by AaronReer almost 3 years ago

#38 - Support BIDS V1.6 schema

Issue - State: open - Opened by ancpJR almost 3 years ago - 1 comment
Labels: enhancement

#37 - Make validation BIDS version sensitive

Issue - State: closed - Opened by ancpJR almost 3 years ago - 2 comments
Labels: enhancement

#36 - Limit the scope of validation

Issue - State: open - Opened by ancpJR almost 3 years ago - 1 comment
Labels: enhancement

#35 - validation error cause not in BIDS specification

Issue - State: open - Opened by ancpJR almost 3 years ago - 4 comments

#34 - add utitlity function to download test datasets

Issue - State: closed - Opened by erdalkaraca almost 3 years ago

#33 - validation module errors and warnings hard to trace back to source

Issue - State: closed - Opened by ancpJR almost 3 years ago - 2 comments
Labels: bug

#32 - Integrate validation into compatibility module

Issue - State: closed - Opened by ancpJR almost 3 years ago - 1 comment
Labels: question

#31 - validation module report.has_errors()

Issue - State: closed - Opened by ancpJR almost 3 years ago - 1 comment
Labels: bug

#30 - corrected typo

Pull Request - State: closed - Opened by AaronReer almost 3 years ago

#29 - Set default value of return_type to 'filename' instead of 'object'

Issue - State: closed - Opened by erdalkaraca almost 3 years ago - 1 comment

#28 - BIDSLayout.get() with scope to derivatives does not return files

Issue - State: closed - Opened by erdalkaraca almost 3 years ago - 1 comment
Labels: bug

#27 - BIDSLayout.get_metadata() crashes when no parameters/filters provided

Issue - State: closed - Opened by erdalkaraca almost 3 years ago - 1 comment

#26 - Readthedocs

Pull Request - State: closed - Opened by erdalkaraca about 3 years ago