ACED-IDP/gen3_util issues and pull requests

#93 - Feature/docref observation focus

Pull Request - State: open - Opened by quinnwai 16 days ago

#92 - fix misc policies

Pull Request - State: closed - Opened by bwalsh 23 days ago

#92 - fix misc policies

Pull Request - State: closed - Opened by bwalsh 23 days ago

#91 - fix: adds data_upload policy for users if `--write` flag is used.

Pull Request - State: closed - Opened by lbeckman314 23 days ago
Labels: enhancement

#91 - fix: adds data_upload policy for users if `--write` flag is used.

Pull Request - State: closed - Opened by lbeckman314 23 days ago
Labels: enhancement

#90 - documentReference w basedOn - reference -> specimen fixture

Pull Request - State: open - Opened by teslajoy 23 days ago - 1 comment

#89 - test dataframer smmart expected data output

Pull Request - State: closed - Opened by teslajoy 24 days ago

#88 - initial fixture data to test use-cases

Pull Request - State: closed - Opened by teslajoy 27 days ago - 1 comment

#88 - initial fixture data to test use-cases

Pull Request - State: closed - Opened by teslajoy 27 days ago - 1 comment

#87 - features/stateful emitter

Pull Request - State: open - Opened by bwalsh 29 days ago - 4 comments

#87 - features/stateful emitter

Pull Request - State: open - Opened by bwalsh 29 days ago - 4 comments

#86 - Feature/add to docref

Pull Request - State: closed - Opened by quinnwai 30 days ago - 1 comment

#85 - DocumentReference Observation with g3t add - discussion point.

Issue - State: open - Opened by teslajoy about 1 month ago

#84 - Feature/research subject

Pull Request - State: closed - Opened by quinnwai about 1 month ago - 1 comment

#83 - Support Bundle Submission DELETE commands on client/server for metadata

Issue - State: open - Opened by matthewpeterkort 3 months ago

#83 - Support Bundle Submission DELETE commands on client/server for metadata

Issue - State: open - Opened by matthewpeterkort 3 months ago

#82 - Feature/pivot improvements

Pull Request - State: closed - Opened by matthewpeterkort 3 months ago - 1 comment

#81 - Feature/pivot

Pull Request - State: closed - Opened by matthewpeterkort 3 months ago

#80 - Adds condition join to dataframe command

Pull Request - State: closed - Opened by matthewpeterkort 4 months ago - 1 comment

#79 - dataframer: include condition in Observation dataframe

Issue - State: open - Opened by bwalsh 4 months ago - 1 comment

#78 - simplify specimen parent

Pull Request - State: closed - Opened by teslajoy 4 months ago - 1 comment

#77 - refactor, use git

Pull Request - State: closed - Opened by bwalsh 5 months ago - 11 comments

#76 - Fix/merge no bucket

Pull Request - State: closed - Opened by bwalsh 5 months ago

#75 - documentation/clarify-gen3-init-instructions

Issue - State: open - Opened by quinnwai 5 months ago

#75 - documentation/clarify-gen3-init-instructions

Issue - State: open - Opened by quinnwai 5 months ago

#74 - Fix/pull from meta

Pull Request - State: closed - Opened by bwalsh 5 months ago

#73 - Re-add and test symlink and scp code

Issue - State: closed - Opened by bwalsh 5 months ago - 1 comment

#73 - Re-add and test symlink and scp code

Issue - State: open - Opened by bwalsh 5 months ago

#72 - Fix/development history

Pull Request - State: closed - Opened by bwalsh 5 months ago

#72 - Fix/development history

Pull Request - State: closed - Opened by bwalsh 5 months ago

#71 - Initial QuinnWai feedback improvements

Pull Request - State: closed - Opened by matthewpeterkort 5 months ago - 3 comments

#70 - fix/rm-user

Pull Request - State: closed - Opened by bwalsh 5 months ago - 1 comment

#69 - Add initial support for etags in manifest

Pull Request - State: open - Opened by lbeckman314 6 months ago - 6 comments
Labels: enhancement

#68 - Feature Request: add support for additional file hashes (e.g. etag)

Issue - State: closed - Opened by lbeckman314 6 months ago - 1 comment
Labels: enhancement

#67 - Feature/reset upgrades

Pull Request - State: closed - Opened by matthewpeterkort 7 months ago - 3 comments

#66 - feature/improve-validation-missing-references

Issue - State: closed - Opened by bwalsh 7 months ago - 2 comments

#65 - fix: supress stack trace when indexd document already exists

Issue - State: closed - Opened by bwalsh 7 months ago - 2 comments

#64 - feature/no-bucket

Pull Request - State: closed - Opened by bwalsh 7 months ago - 2 comments

#63 - addresses issues/49

Pull Request - State: closed - Opened by matthewpeterkort 7 months ago - 5 comments

#62 - fix

Pull Request - State: closed - Opened by matthewpeterkort 7 months ago

#61 - Adds supplemental docs

Pull Request - State: closed - Opened by matthewpeterkort 7 months ago

#60 - merge changes

Pull Request - State: closed - Opened by bwalsh 7 months ago

#59 - Update cli.py

Pull Request - State: closed - Opened by lbeckman314 7 months ago
Labels: bug

#58 - Add tests for privileged and non privileged User.

Issue - State: open - Opened by bwalsh 7 months ago - 2 comments

#57 - improve empty project

Issue - State: closed - Opened by bwalsh 7 months ago - 3 comments

#56 - feature/readme, gen3_tracker

Pull Request - State: closed - Opened by bwalsh 7 months ago

#55 - bump 0.0.16

Pull Request - State: closed - Opened by bwalsh 7 months ago

#54 - feature/pydantic-2

Pull Request - State: closed - Opened by bwalsh 7 months ago

#53 - feature/empty-project

Pull Request - State: closed - Opened by bwalsh 8 months ago

#52 - feature/re-run

Pull Request - State: closed - Opened by bwalsh 8 months ago

#51 - Add ability to republish last push

Issue - State: closed - Opened by bwalsh 8 months ago - 1 comment

#50 - Improve tests for init / commit / push / push --re_run

Issue - State: closed - Opened by bwalsh 8 months ago - 1 comment

#49 - add .gitignore to .g3t/ and META/ directories

Issue - State: open - Opened by bwalsh 8 months ago - 1 comment

#48 - fix/file-ls-param

Pull Request - State: closed - Opened by bwalsh 8 months ago

#47 - feature/manifest support "no bucket", ie. upload: no-op, download: scp or symlink

Issue - State: open - Opened by bwalsh 8 months ago

#46 - simplify adding data steward, obscure roles

Issue - State: closed - Opened by bwalsh 8 months ago

#45 - backlog/git-lite

Issue - State: open - Opened by bwalsh 8 months ago - 3 comments

#44 - test-plan/git-lite/consumer

Issue - State: open - Opened by bwalsh 8 months ago

#43 - test-plan/git-lite/submitter

Issue - State: open - Opened by bwalsh 8 months ago

#42 - feature/git-lite

Pull Request - State: closed - Opened by bwalsh 9 months ago - 12 comments

#41 - feature/default_tabular_columns

Pull Request - State: closed - Opened by bwalsh 9 months ago

#40 - git brainstorming

Issue - State: closed - Opened by bwalsh 9 months ago - 2 comments

#39 - feature/refactor-cli

Pull Request - State: closed - Opened by bwalsh 9 months ago - 14 comments

#38 - fix-logging

Pull Request - State: closed - Opened by bwalsh 9 months ago

#37 - feature/one project

Pull Request - State: closed - Opened by bwalsh 9 months ago

#36 - chore/cleanup

Pull Request - State: closed - Opened by bwalsh 9 months ago

#35 - fix deprecated pkg resources

Pull Request - State: closed - Opened by bwalsh 9 months ago

#34 - Simplify CLI user interface

Issue - State: closed - Opened by bwalsh 9 months ago - 3 comments

#33 - remove libmagic

Pull Request - State: closed - Opened by bwalsh 9 months ago - 1 comment

#32 - feature/tabular

Pull Request - State: closed - Opened by bwalsh 9 months ago - 1 comment

#31 - feature one project

Pull Request - State: closed - Opened by bwalsh 9 months ago

#30 - Feature/tabular

Pull Request - State: closed - Opened by bwalsh 9 months ago - 2 comments

#29 - edit metadata

Issue - State: open - Opened by bwalsh 9 months ago - 3 comments

#28 - bug: project name should be unique within program, currently unique across all programs

Issue - State: closed - Opened by bwalsh 9 months ago - 1 comment

#27 - delete_file_locations support

Issue - State: closed - Opened by bwalsh 9 months ago - 4 comments

#26 - Optimize user submission flow

Pull Request - State: closed - Opened by bwalsh 10 months ago - 1 comment

#25 - Add initial support for removing files from a project

Pull Request - State: closed - Opened by lbeckman314 10 months ago - 2 comments

#24 - feature/manifest (#23)

Pull Request - State: closed - Opened by bwalsh 11 months ago