Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / 4dn-dcic/tibanna_ff issues and pull requests

#83 - Support operator `is_type` in QC rulesets

Pull Request - State: closed - Opened by alexander-veit about 1 month ago

#82 - Remove explicit schema properties from QC values

Pull Request - State: closed - Opened by alexander-veit 3 months ago

#81 - Support for Python 3.12

Pull Request - State: closed - Opened by dmichaels-harvard 3 months ago - 1 comment

#80 - Update to Tibanna 5.2.2

Pull Request - State: closed - Opened by alexander-veit 4 months ago

#79 - Update secure AMIs

Pull Request - State: closed - Opened by alexander-veit 6 months ago

#78 - Common fields for SMaHT

Pull Request - State: closed - Opened by alexander-veit 7 months ago

#77 - Support md5 workflows in SMaHT

Pull Request - State: closed - Opened by alexander-veit 8 months ago

#74 - Support for SMaHT data model

Pull Request - State: closed - Opened by alexander-veit 10 months ago

#73 - QC validation

Pull Request - State: closed - Opened by alexander-veit 12 months ago - 1 comment

#71 - Upgrade Python 3.11

Pull Request - State: closed - Opened by dmichaels-harvard about 1 year ago - 4 comments

#70 - Support Python 3.9. Update Tibanna.

Pull Request - State: closed - Opened by alexander-veit about 1 year ago

#69 - Fix get_extra_file_key

Pull Request - State: closed - Opened by alexander-veit about 1 year ago - 1 comment

#68 - Provision for SMaHT

Pull Request - State: closed - Opened by willronchetti about 1 year ago

#67 - Generic QC

Pull Request - State: closed - Opened by alexander-veit over 1 year ago

#66 - New Utils, Poetry

Pull Request - State: closed - Opened by willronchetti over 1 year ago

#65 - Accept kwargs

Pull Request - State: closed - Opened by drio18 over 1 year ago

#64 - Upgrade to Tibanna 3.1.1

Pull Request - State: closed - Opened by alexander-veit over 1 year ago

#63 - Tibanna 3.1.0 + support for Graviton instances

Pull Request - State: closed - Opened by alexander-veit almost 2 years ago

#62 - Bump certifi from 2022.9.24 to 2022.12.7

Pull Request - State: open - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#61 - Allow Utils 6.x.x + pin requests version

Pull Request - State: closed - Opened by alexander-veit almost 2 years ago

#60 - Allow Utils 6.x.x

Pull Request - State: closed - Opened by willronchetti almost 2 years ago - 1 comment

#59 - Subnet Config Update

Pull Request - State: closed - Opened by willronchetti about 2 years ago

#58 - Add file type FileSubmitted

Pull Request - State: closed - Opened by alexander-veit about 2 years ago

#57 - Use new Utils

Pull Request - State: closed - Opened by willronchetti about 2 years ago

#56 - Subnet Randomization

Pull Request - State: closed - Opened by willronchetti over 2 years ago - 1 comment

#55 - Move to Poetry and Python 3.8

Pull Request - State: closed - Opened by alexander-veit over 2 years ago

#54 - QC cache fix

Pull Request - State: closed - Opened by willronchetti over 2 years ago

#53 - Small Encryption Changes

Pull Request - State: closed - Opened by willronchetti almost 3 years ago

#52 - Subnet Fix

Pull Request - State: closed - Opened by willronchetti almost 3 years ago

#51 - Check current file status before patching it to uploaded

Pull Request - State: closed - Opened by andreacosolo almost 3 years ago

#50 - Support FileMicroscopy items

Pull Request - State: closed - Opened by alexander-veit almost 3 years ago

#49 - Pass secure AMI ID to the workflow configuration

Pull Request - State: closed - Opened by alexander-veit almost 3 years ago

#48 - Enable new secure AMI

Pull Request - State: closed - Opened by willronchetti almost 3 years ago

#47 - Fix cost updater

Pull Request - State: closed - Opened by alexander-veit almost 3 years ago

#46 - Load metadata directly from database

Pull Request - State: closed - Opened by alexander-veit almost 3 years ago

#45 - Fix post deployment tests + add workflow_engine parameter

Pull Request - State: closed - Opened by alexander-veit about 3 years ago

#44 - Bump minimal Tibanna version

Pull Request - State: closed - Opened by alexander-veit about 3 years ago

#43 - Fix post deployment tests

Pull Request - State: closed - Opened by alexander-veit about 3 years ago

#42 - Fix post deployment tests

Pull Request - State: closed - Opened by alexander-veit about 3 years ago

#41 - Repair Policy Name

Pull Request - State: closed - Opened by willronchetti about 3 years ago

#40 - Add EB Perms

Pull Request - State: closed - Opened by willronchetti about 3 years ago

#39 - removed run_workflow and status_wfr from pony (already removed from z…

Pull Request - State: closed - Opened by SooLee about 3 years ago

#38 - Cgapwolf env name

Pull Request - State: closed - Opened by SooLee about 3 years ago

#37 - No trigger

Pull Request - State: closed - Opened by SooLee about 3 years ago

#36 - Use correct resource string in cost updater lambda

Pull Request - State: closed - Opened by alexander-veit about 3 years ago

#35 - fixed pony deployment error due to small error

Pull Request - State: closed - Opened by SooLee about 3 years ago

#34 - Ecr

Pull Request - State: closed - Opened by SooLee about 3 years ago

#33 - Get log bucket from s3Utils

Pull Request - State: closed - Opened by willronchetti about 3 years ago

#32 - Vpc

Pull Request - State: closed - Opened by SooLee over 3 years ago

#31 - fix to handle ints in match_field_type for QCs

Pull Request - State: closed - Opened by clarabakker over 3 years ago

#30 - 1.3.1

Pull Request - State: closed - Opened by SooLee over 3 years ago

#29 - using tibanna 1.2.7 - fixing run_workflow response arn

Pull Request - State: closed - Opened by SooLee over 3 years ago

#28 - Format if extra

Pull Request - State: closed - Opened by SooLee over 3 years ago

#27 - tibanna 1.2.6 - bucket access block / md5 missing

Pull Request - State: closed - Opened by SooLee over 3 years ago

#26 - add open data bucket to iam e.g. for luisa/clara

Pull Request - State: closed - Opened by SooLee over 3 years ago

#25 - Opendata

Pull Request - State: closed - Opened by SooLee over 3 years ago

#24 - 1.1.0

Pull Request - State: closed - Opened by SooLee over 3 years ago

#23 - common field passes on fields to wfr, pf, qc, wfr_qc and qclist

Pull Request - State: closed - Opened by SooLee over 3 years ago

#22 - tibanna 1.0.5

Pull Request - State: closed - Opened by SooLee over 3 years ago

#21 - Metric html

Pull Request - State: closed - Opened by SooLee over 3 years ago

#20 - use tibanna 1.0.0

Pull Request - State: closed - Opened by SooLee over 3 years ago

#19 - Build Workflow

Pull Request - State: closed - Opened by willronchetti almost 4 years ago

#18 - Second ouput extra

Pull Request - State: closed - Opened by SooLee about 4 years ago

#17 - Custom qc

Pull Request - State: closed - Opened by SooLee about 4 years ago

#16 - Bamsnap

Pull Request - State: closed - Opened by SooLee about 4 years ago

#15 - Pr use for

Pull Request - State: closed - Opened by SooLee over 4 years ago

#14 - use_for

Pull Request - State: closed - Opened by SooLee over 4 years ago

#13 - Readlog

Pull Request - State: closed - Opened by SooLee over 4 years ago

#12 - rename applied to extra files

Pull Request - State: closed - Opened by SooLee over 4 years ago

#11 - Restriction enzyme checker

Pull Request - State: closed - Opened by clarabakker over 4 years ago

#10 - Rename fastq formatqc

Pull Request - State: closed - Opened by Lmercadom over 4 years ago

#9 - Added tests for fastq_formatqc

Pull Request - State: closed - Opened by Lmercadom over 4 years ago

#8 - multiple files linking to the same qc

Pull Request - State: closed - Opened by SooLee over 4 years ago

#7 - Array UUID

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#6 - input mount option added

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#5 - Actb

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#4 - Inttest

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#3 - Moretests

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#2 - null extra not included to run_task input json

Pull Request - State: closed - Opened by SooLee almost 5 years ago

#1 - truncated postrunjson handling for update_ffmeta

Pull Request - State: closed - Opened by SooLee almost 5 years ago