10XGenomics/rust-debruijn issues and pull requests

#38 - Add performance optimizations

Pull Request - State: closed - Opened by evolp about 2 months ago

#37 - max_path ignores path validity when choosing next node

Issue - State: open - Opened by evolp 4 months ago

#36 - Update bit-set requirement from 0.5.1 to 0.8.0

Pull Request - State: open - Opened by dependabot[bot] 4 months ago
Labels: dependencies, rust

#35 - Update bit-set requirement from 0.5.1 to 0.6.0

Pull Request - State: closed - Opened by dependabot[bot] 5 months ago - 1 comment
Labels: dependencies, rust

#34 - Bump actions/cache from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, github_actions

#33 - update to boomphf 0.6

Pull Request - State: closed - Opened by pmarks over 1 year ago

#32 - ci: update workflow actions

Pull Request - State: closed - Opened by adam-azarchs over 1 year ago

#31 - Update pretty_assertions requirement from 0.5 to 1.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, rust

#30 - Update rand requirement from 0.5 to 0.8

Pull Request - State: open - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, rust

#29 - deps: Add dependabot config to make sure dependencies are up to date

Pull Request - State: closed - Opened by bgianfo over 1 year ago

#28 - fix(ci): Update to `ubuntu-latest` for actions, as 18.04 no longer works

Pull Request - State: closed - Opened by bgianfo over 1 year ago

#27 - Update to 2021 edition.

Pull Request - State: closed - Opened by adam-azarchs over 2 years ago

#26 - Enable clippy in CI and fix lints.

Pull Request - State: closed - Opened by adam-azarchs about 3 years ago

#25 - Array-backed kmers w/ parameters set by const-generics

Pull Request - State: open - Opened by pmarks about 3 years ago

#24 - switch to const generics for selecting K

Pull Request - State: open - Opened by pmarks about 3 years ago

#23 - Replace `num` with `num_traits`

Pull Request - State: closed - Opened by evolvedmicrobe about 3 years ago - 3 comments

#22 - Allow update of num to 0.4.

Pull Request - State: closed - Opened by adam-azarchs over 3 years ago

#21 - DnaStringSlice should abstract away the backing DnaString rc status

Issue - State: open - Opened by d-cameron over 3 years ago - 1 comment

#20 - Documentation clarification

Issue - State: closed - Opened by d-cameron over 3 years ago - 3 comments

#19 - Upgrade non-doc comments to doc comments

Pull Request - State: closed - Opened by dcroote almost 4 years ago - 1 comment

#18 - Speed up bitopts_avx2

Pull Request - State: closed - Opened by Daniel-Liu-c0deb0t about 4 years ago - 3 comments

#17 - faster DnaString construction

Pull Request - State: closed - Opened by pmarks over 4 years ago - 1 comment

#16 - speed up ndiffs using code from Pat

Pull Request - State: closed - Opened by DavidBJaffe over 4 years ago - 1 comment

#15 - allow lowercase bases in from_acgt_bytes_hashn

Pull Request - State: closed - Opened by jgarthur almost 5 years ago - 1 comment

#14 - overhaul MSP and greatly improve tests.

Pull Request - State: closed - Opened by pmarks about 5 years ago

#13 - Pmarks/remove equiv classes

Pull Request - State: closed - Opened by pmarks about 5 years ago

#12 - add function ndiffs

Pull Request - State: closed - Opened by DavidBJaffe about 5 years ago - 1 comment

#11 - Should we slice when continuous shards are going to the same bucket ?

Issue - State: closed - Opened by k3yavi over 5 years ago - 2 comments

#10 - Problem with the repetitive sequence

Issue - State: closed - Opened by k3yavi over 5 years ago - 6 comments

#9 - update to Rust 2018 - minor changes

Pull Request - State: closed - Opened by pmarks over 5 years ago

#8 - switch to updated boomphf

Pull Request - State: closed - Opened by pmarks almost 6 years ago - 1 comment

#7 - switch bit layout of DnaString to match Kmers -- makes get_kmer() fas…

Pull Request - State: closed - Opened by pmarks almost 6 years ago - 5 comments

#6 - add support for k=12 and fix typo in documentation

Pull Request - State: closed - Opened by DavidBJaffe almost 6 years ago

#5 - dj/fix eq for dna string slice

Pull Request - State: closed - Opened by DavidBJaffe about 6 years ago - 1 comment

#4 - add support for k=20