Issues created

Pull requests created

• nci-gdc/maf-lib: 40
• nci-gdc/aliquot-maf-tools: 30
• nci-gdc/variant-filtration-tool: 10
• nci-gdc/gdc-rnaseq-cwl: 8
• nci-gdc/aliquot-maf-cwl: 7
• nci-gdc/gatk-docker: 7
• nci-gdc/picard-docker: 7
• nci-gdc/muse-tool: 7
• nci-gdc/gdc-rnaseq-tool: 6
• nci-gdc/star-docker: 5
• nci-gdc/bio-tarball-to-fastqgz: 5
• nci-gdc/bam_readgroup_to_json: 5
• nci-gdc/gatk4-mutect2-tool: 5
• nci-gdc/mutect2-tool: 4
• nci-gdc/gdc-mirnaseq-cwl: 4
• nci-gdc/vep-cwl: 4
• nci-gdc/somaticsniper-tool: 4
• nci-gdc/vep-tool: 4
• nci-gdc/gdc_tosvc_workflow: 3
• nci-gdc/sesame-cwl: 3
• nci-gdc/picard_metrics_sqlite: 3
• nci-gdc/bio_qcmetrics_tool: 3
• nci-gdc/trimmomatic-docker: 3
• nci-gdc/variant-filtration-cwl: 3
• nci-gdc/gatk4_mutect2_cwl: 3
• nci-gdc/gdc-somatic-variant-calling-workflow: 3
• nci-gdc/gdc-tosvc-tools: 3
• nci-gdc/json-to-sqlite: 2
• nci-gdc/htseq-tool: 2
• nci-gdc/bwa-docker: 2
• NCI-GDC/fastqc_to_json: 2
• NCI-GDC/samtools-metrics-sqlite: 2
• NCI-GDC/fastqc_db: 2
• nci-gdc/gdc-sanger-somatic-cwl: 2
• nci-gdc/varscan-tool: 2
• nci-gdc/samtools-docker: 2
• nci-gdc/gdc-dnaseq-cwl: 2
• nci-gdc/biobambam-docker: 2
• nci-gdc/gdc-workflow-overview: 2
• nci-gdc/merge-sqlite: 2
• nci-gdc/muse-cwl: 2
• NCI-GDC/readgroup_json_db: 2
• nci-gdc/fastqc-docker: 2
• nci-gdc/samtools-mpileup-tool: 1
• nci-gdc/fqvendorfail-docker: 1
• nci-gdc/dnacopy-tool: 1
• nci-gdc/mutect2-cwl: 1
• nci-gdc/fastq_cleaner: 1
• nci-gdc/somaticsniper-cwl: 1
• nci-gdc/mirna-profiler-docker: 1
• nci-gdc/varscan-cwl: 1
• nci-gdc/samtools-mpileup-cwl: 1

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